MGE detailed information
MGE type: Prophage MGE length: 58083 bp
Accession: NZ_AP024736 Location: 1562127..1620209 Organism: Staphylococcus aureus strain 59709 Replicon: chromosome
Accession: NZ_AP024736 Location: 1562127..1620209 Organism: Staphylococcus aureus strain 59709 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCX48_RS07470 (1557876) | 1557876..1558124 | + | 249 | WP_001151997.1 | ferredoxin | - |
| OCX48_RS07475 (1558230) | 1558230..1558775 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| OCX48_RS07480 (1559185) | 1559185..1560099 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| OCX48_RS07485 (1560156) | 1560156..1561073 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| OCX48_RS07490 (1561131) | 1561131..1562036 | - | 906 | WP_000476866.1 | DUF1672 domain-containing protein | - |
| OCX48_RS07495 (1562127) | 1562127..1562342 | - | 216 | WP_000126130.1 | hypothetical protein | - |
| OCX48_RS07500 (1563064) | 1563064..1564518 | - | 1455 | WP_000909213.1 | N-acetylmuramoyl-L-alanine amidase | - |
| OCX48_RS07505 (1564529) | 1564529..1564831 | - | 303 | WP_000339146.1 | phage holin | - |
| OCX48_RS07510 (1564967) | 1564967..1565266 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| OCX48_RS07515 (1565312) | 1565312..1565476 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| OCX48_RS07520 (1565469) | 1565469..1565858 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| OCX48_RS07525 (1565858) | 1565858..1567324 | - | 1467 | WP_031775920.1 | BppU family phage baseplate upper protein | - |
| OCX48_RS07530 (1567324) | 1567324..1569234 | - | 1911 | WP_044425964.1 | hypothetical protein | - |
| OCX48_RS07535 (1569250) | 1569250..1569540 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| OCX48_RS07540 (1569540) | 1569540..1571123 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| OCX48_RS07545 (1571132) | 1571132..1571956 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| OCX48_RS07550 (1571956) | 1571956..1578156 | - | 6201 | WP_031860857.1 | phage tail tape measure protein | - |
| OCX48_RS07555 (1578170) | 1578170..1578328 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| OCX48_RS07560 (1578379) | 1578379..1578720 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| OCX48_RS07565 (1578778) | 1578778..1579233 | - | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| OCX48_RS07570 (1579325) | 1579325..1579966 | - | 642 | WP_000807536.1 | phage tail protein | - |
| OCX48_RS07575 (1580001) | 1580001..1580396 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| OCX48_RS07580 (1580397) | 1580397..1580798 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| OCX48_RS07585 (1580795) | 1580795..1581127 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| OCX48_RS07590 (1581139) | 1581139..1581417 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| OCX48_RS07595 (1581486) | 1581486..1582649 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| OCX48_RS07600 (1582661) | 1582661..1583434 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| OCX48_RS07605 (1583418) | 1583418..1584656 | - | 1239 | WP_001100664.1 | phage portal protein | - |
| OCX48_RS07610 (1584661) | 1584661..1586352 | - | 1692 | WP_000153544.1 | terminase large subunit | - |
| OCX48_RS07615 (1586342) | 1586342..1586647 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| OCX48_RS07620 (1586775) | 1586775..1587089 | - | 315 | WP_000160693.1 | HNH endonuclease | - |
| OCX48_RS07625 (1587246) | 1587246..1587683 | - | 438 | WP_000528512.1 | transcriptional regulator | - |
| OCX48_RS07630 (1587696) | 1587696..1589063 | - | 1368 | WP_261934053.1 | DEAD/DEAH box helicase | - |
| OCX48_RS07635 (1589044) | 1589044..1589334 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| OCX48_RS07640 (1589468) | 1589468..1589566 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| OCX48_RS07645 (1589675) | 1589675..1592122 | - | 2448 | WP_000884870.1 | VapE family protein | - |
| OCX48_RS07650 (1592410) | 1592410..1592610 | - | 201 | WP_000265252.1 | DUF1514 family protein | - |
| OCX48_RS07655 (1592678) | 1592678..1592830 | - | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| OCX48_RS07660 (1592827) | 1592827..1593033 | - | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
| OCX48_RS07665 (1593070) | 1593070..1593603 | - | 534 | WP_261934054.1 | dUTPase | - |
| OCX48_RS07670 (1593618) | 1593618..1593779 | - | 162 | WP_000889684.1 | hypothetical protein | - |
| OCX48_RS07675 (1593780) | 1593780..1593953 | - | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| OCX48_RS07680 (1593943) | 1593943..1594194 | - | 252 | WP_031267622.1 | DUF1024 family protein | Toxin Detail |
| OCX48_RS07685 (1594187) | 1594187..1594494 | - | 308 | Protein_1508 | hypothetical protein | - |
| OCX48_RS07690 (1594491) | 1594491..1594838 | - | 348 | WP_000979209.1 | YopX family protein | - |
| OCX48_RS07695 (1594835) | 1594835..1595215 | - | 381 | WP_001668982.1 | hypothetical protein | - |
| OCX48_RS07700 (1595218) | 1595218..1595424 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| OCX48_RS07705 (1595438) | 1595438..1595686 | - | 249 | WP_060474161.1 | SAV1978 family virulence-associated passenger protein | - |
| OCX48_RS07710 (1595686) | 1595686..1595940 | - | 255 | WP_000022722.1 | DUF3310 domain-containing protein | - |
| OCX48_RS07715 (1595937) | 1595937..1596341 | - | 405 | WP_044426014.1 | SA1788 family PVL leukocidin-associated protein | - |
| OCX48_RS07720 (1596341) | 1596341..1596526 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| OCX48_RS07725 (1596539) | 1596539..1598491 | - | 1953 | WP_078064460.1 | DNA polymerase | - |
| OCX48_RS07730 (1598559) | 1598559..1599116 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| OCX48_RS07735 (1599142) | 1599142..1600308 | - | 1167 | WP_000762525.1 | DUF2800 domain-containing protein | - |
| OCX48_RS07740 (1600305) | 1600305..1600667 | - | 363 | WP_000279445.1 | hypothetical protein | - |
| OCX48_RS07745 (1600682) | 1600682..1601005 | - | 324 | WP_000174995.1 | hypothetical protein | - |
| OCX48_RS07750 (1601084) | 1601084..1601245 | - | 162 | WP_015986189.1 | DUF1270 family protein | - |
| OCX48_RS07755 (1601257) | 1601257..1601520 | - | 264 | WP_044426023.1 | helix-turn-helix domain-containing protein | - |
| OCX48_RS07760 (1601545) | 1601545..1601760 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| OCX48_RS07765 (1601815) | 1601815..1602180 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| OCX48_RS07770 (1602149) | 1602149..1602394 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| OCX48_RS07775 (1602450) | 1602450..1602659 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| OCX48_RS07780 (1602649) | 1602649..1602792 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| OCX48_RS07785 (1602807) | 1602807..1603250 | - | 444 | WP_000435360.1 | hypothetical protein | - |
| OCX48_RS07790 (1603268) | 1603268..1603492 | - | 225 | WP_063653167.1 | DUF739 family protein | - |
| OCX48_RS07795 (1603654) | 1603654..1604034 | + | 381 | WP_001089477.1 | helix-turn-helix domain-containing protein | - |
| OCX48_RS07800 (1604056) | 1604056..1604514 | + | 459 | WP_001558059.1 | hypothetical protein | - |
| OCX48_RS07805 (1604532) | 1604532..1604853 | + | 322 | Protein_1532 | hypothetical protein | - |
| OCX48_RS07810 (1604882) | 1604882..1605277 | + | 396 | WP_000449655.1 | hypothetical protein | - |
| OCX48_RS07815 (1605367) | 1605367..1605513 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| OCX48_RS07820 (1605510) | 1605510..1606124 | - | 615 | WP_000191464.1 | hypothetical protein | - |
| OCX48_RS07825 (1606250) | 1606250..1607455 | + | 1206 | WP_031864865.1 | site-specific integrase | - |
| OCX48_RS07830 (1607498) | 1607498..1609525 | - | 2028 | WP_001793477.1 | hypothetical protein | - |
| OCX48_RS07835 (1609537) | 1609537..1610445 | - | 909 | WP_001793476.1 | DUF1672 domain-containing protein | - |
| OCX48_RS07840 (1610690) | 1610690..1612441 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| OCX48_RS07845 (1612422) | 1612422..1613147 | - | 726 | WP_000064078.1 | two-component system response regulator SrrA | - |
| OCX48_RS07850 (1613280) | 1613280..1614017 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| OCX48_RS07855 (1614010) | 1614010..1614552 | - | 543 | WP_000368657.1 | SMC-Scp complex subunit ScpB | - |
| OCX48_RS07860 (1614545) | 1614545..1615276 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| OCX48_RS07865 (1615368) | 1615368..1615874 | + | 507 | WP_001183427.1 | DUF309 domain-containing protein | - |
| OCX48_RS07870 (1615952) | 1615952..1616839 | - | 888 | WP_000447733.1 | site-specific tyrosine recombinase XerD | - |
| OCX48_RS07875 (1616888) | 1616888..1617337 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| OCX48_RS07880 (1617442) | 1617442..1617984 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| OCX48_RS07885 (1618066) | 1618066..1618974 | + | 909 | WP_001171352.1 | aldo/keto reductase | - |
| OCX48_RS07890 (1619190) | 1619190..1619438 | - | 249 | WP_000995799.1 | hypothetical protein | - |
| OCX48_RS07895 (1619454) | 1619454..1620209 | - | 756 | WP_117200966.1 | SDR family oxidoreductase | - |
| OCX48_RS07900 (1620351) | 1620351..1621166 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| OCX48_RS07905 (1621269) | 1621269..1622189 | - | 921 | WP_000454068.1 | ribonuclease Z | - |
| OCX48_RS07910 (1622502) | 1622502..1623986 | + | 1485 | WP_117200968.1 | glucose-6-phosphate dehydrogenase | - |
| OCX48_RS07915 (1624216) | 1624216..1625082 | + | 867 | WP_000382586.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|