MGE detailed information
MGE type: Prophage MGE length: 66096 bp
Accession: NZ_AP024734 Location: 1565718..1631813 Organism: Staphylococcus aureus strain 59691 Replicon: chromosome
Accession: NZ_AP024734 Location: 1565718..1631813 Organism: Staphylococcus aureus strain 59691 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCX19_RS07515 (1561979) | 1561979..1563358 | - | 1380 | WP_000902120.1 | ATP-dependent DNA helicase RecQ | - |
| OCX19_RS07520 (1563348) | 1563348..1564301 | - | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| OCX19_RS07525 (1564409) | 1564409..1564657 | + | 249 | WP_001151997.1 | ferredoxin | - |
| OCX19_RS07530 (1564763) | 1564763..1565308 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| OCX19_RS07535 (1565718) | 1565718..1566632 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| OCX19_RS07540 (1566689) | 1566689..1567606 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| OCX19_RS07545 (1567664) | 1567664..1568569 | - | 906 | WP_000476866.1 | DUF1672 domain-containing protein | - |
| OCX19_RS07550 (1568660) | 1568660..1568845 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| OCX19_RS07555 (1569090) | 1569090..1569545 | - | 456 | WP_000971220.1 | hypothetical protein | - |
| OCX19_RS07560 (1569542) | 1569542..1570129 | - | 588 | WP_117219087.1 | hypothetical protein | - |
| OCX19_RS07565 (1570521) | 1570521..1571975 | - | 1455 | WP_117219086.1 | N-acetylmuramoyl-L-alanine amidase | - |
| OCX19_RS07570 (1571986) | 1571986..1572288 | - | 303 | WP_000339144.1 | phage holin | - |
| OCX19_RS07575 (1572424) | 1572424..1572723 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| OCX19_RS07580 (1572769) | 1572769..1572933 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| OCX19_RS07585 (1572926) | 1572926..1573315 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| OCX19_RS07590 (1573315) | 1573315..1574781 | - | 1467 | WP_117219085.1 | BppU family phage baseplate upper protein | - |
| OCX19_RS07595 (1574781) | 1574781..1576691 | - | 1911 | WP_000429555.1 | hypothetical protein | - |
| OCX19_RS07600 (1576707) | 1576707..1576997 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| OCX19_RS07605 (1576997) | 1576997..1578580 | - | 1584 | WP_031768052.1 | prophage endopeptidase tail family protein | - |
| OCX19_RS07610 (1578589) | 1578589..1579413 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| OCX19_RS07615 (1579413) | 1579413..1585589 | - | 6177 | WP_261921417.1 | phage tail tape measure protein | - |
| OCX19_RS07620 (1585603) | 1585603..1585761 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| OCX19_RS07625 (1585803) | 1585803..1586153 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| OCX19_RS07630 (1586211) | 1586211..1586666 | - | 456 | WP_031768047.1 | Ig-like domain-containing protein | - |
| OCX19_RS07635 (1586758) | 1586758..1587399 | - | 642 | WP_117219083.1 | phage tail protein | - |
| OCX19_RS07640 (1587434) | 1587434..1587829 | - | 396 | WP_001636966.1 | DUF3168 domain-containing protein | - |
| OCX19_RS07645 (1587830) | 1587830..1588231 | - | 402 | WP_088607379.1 | hypothetical protein | - |
| OCX19_RS07650 (1588228) | 1588228..1588560 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| OCX19_RS07655 (1588572) | 1588572..1588850 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| OCX19_RS07660 (1588919) | 1588919..1590082 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| OCX19_RS07665 (1590094) | 1590094..1590867 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| OCX19_RS07670 (1590851) | 1590851..1592089 | - | 1239 | WP_001100665.1 | phage portal protein | - |
| OCX19_RS07675 (1592094) | 1592094..1593785 | - | 1692 | WP_261921418.1 | terminase large subunit | - |
| OCX19_RS07680 (1593775) | 1593775..1594080 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| OCX19_RS07685 (1594208) | 1594208..1594522 | - | 315 | WP_000160693.1 | HNH endonuclease | - |
| OCX19_RS07690 (1594679) | 1594679..1595116 | - | 438 | WP_000528512.1 | transcriptional regulator | - |
| OCX19_RS07695 (1595129) | 1595129..1596496 | - | 1368 | WP_119305744.1 | DEAD/DEAH box helicase | - |
| OCX19_RS07700 (1596477) | 1596477..1596767 | - | 291 | WP_000665204.1 | VRR-NUC domain-containing protein | - |
| OCX19_RS07705 (1596901) | 1596901..1597005 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| OCX19_RS07710 (1597108) | 1597108..1599555 | - | 2448 | WP_172576659.1 | virulence-associated E family protein | - |
| OCX19_RS07715 (1599607) | 1599607..1599807 | - | 201 | WP_043854698.1 | DUF1514 family protein | - |
| OCX19_RS07720 (1599875) | 1599875..1600027 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| OCX19_RS07725 (1600024) | 1600024..1600230 | - | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| OCX19_RS07730 (1600267) | 1600267..1600803 | - | 537 | WP_103150126.1 | dUTPase | - |
| OCX19_RS07735 (1600796) | 1600796..1600966 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| OCX19_RS07740 (1600953) | 1600953..1601207 | - | 255 | WP_117219082.1 | DUF1024 family protein | - |
| OCX19_RS07745 (1601399) | 1601399..1601725 | - | 327 | WP_231916449.1 | hypothetical protein | - |
| OCX19_RS07750 (1601755) | 1601755..1601901 | - | 147 | Protein_1522 | acetyltransferase | - |
| OCX19_RS07755 (1601916) | 1601916..1602164 | - | 249 | WP_117219081.1 | phi PVL orf 51-like protein | - |
| OCX19_RS07760 (1602164) | 1602164..1602418 | - | 255 | WP_000111487.1 | DUF3310 domain-containing protein | - |
| OCX19_RS07765 (1602418) | 1602418..1602819 | - | 402 | WP_000113977.1 | PVL family protein | - |
| OCX19_RS07770 (1602819) | 1602819..1603004 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| OCX19_RS07775 (1603017) | 1603017..1604968 | - | 1952 | Protein_1527 | DNA polymerase | - |
| OCX19_RS07780 (1605037) | 1605037..1605594 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| OCX19_RS07785 (1605620) | 1605620..1606786 | - | 1167 | WP_064129389.1 | DUF2800 domain-containing protein | - |
| OCX19_RS07790 (1606783) | 1606783..1607145 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| OCX19_RS07795 (1607160) | 1607160..1607483 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| OCX19_RS07800 (1607562) | 1607562..1607723 | - | 162 | WP_001285963.1 | DUF1270 family protein | - |
| OCX19_RS07805 (1607736) | 1607736..1607999 | - | 264 | WP_001124159.1 | helix-turn-helix domain-containing protein | - |
| OCX19_RS07810 (1608024) | 1608024..1608239 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| OCX19_RS07815 (1608294) | 1608294..1608659 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| OCX19_RS07820 (1608628) | 1608628..1608873 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| OCX19_RS07825 (1608929) | 1608929..1609138 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| OCX19_RS07830 (1609128) | 1609128..1609271 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| OCX19_RS07835 (1609300) | 1609300..1610076 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| OCX19_RS07840 (1610090) | 1610090..1610326 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| OCX19_RS07845 (1610478) | 1610478..1610792 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| OCX19_RS07850 (1610805) | 1610805..1611266 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| OCX19_RS07855 (1611284) | 1611284..1611868 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| OCX19_RS07860 (1612098) | 1612098..1612244 | + | 147 | WP_072433242.1 | hypothetical protein | - |
| OCX19_RS07865 (1612241) | 1612241..1612855 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| OCX19_RS07870 (1612981) | 1612981..1614186 | + | 1206 | WP_000264747.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| OCX19_RS07875 (1614229) | 1614229..1616256 | - | 2028 | WP_117219080.1 | hypothetical protein | - |
| OCX19_RS07880 (1616268) | 1616268..1617176 | - | 909 | WP_001793476.1 | DUF1672 domain-containing protein | - |
| OCX19_RS07885 (1617421) | 1617421..1619172 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| OCX19_RS07890 (1619153) | 1619153..1619878 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| OCX19_RS07895 (1620011) | 1620011..1620748 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| OCX19_RS07900 (1620741) | 1620741..1621283 | - | 543 | WP_000368657.1 | SMC-Scp complex subunit ScpB | - |
| OCX19_RS07905 (1621276) | 1621276..1622007 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| OCX19_RS07910 (1622099) | 1622099..1622605 | + | 507 | WP_001183427.1 | DUF309 domain-containing protein | - |
| OCX19_RS07915 (1622683) | 1622683..1623570 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| OCX19_RS07920 (1623619) | 1623619..1624068 | - | 450 | WP_160199702.1 | Fur family transcriptional regulator | - |
| OCX19_RS07925 (1624173) | 1624173..1624715 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| OCX19_RS07930 (1624797) | 1624797..1625705 | + | 909 | WP_001171352.1 | aldo/keto reductase | - |
| OCX19_RS07935 (1625921) | 1625921..1626169 | - | 249 | WP_000995799.1 | hypothetical protein | - |
| OCX19_RS07940 (1626185) | 1626185..1626940 | - | 756 | WP_117200966.1 | SDR family oxidoreductase | - |
| OCX19_RS07945 (1627082) | 1627082..1627897 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| OCX19_RS07950 (1628000) | 1628000..1628920 | - | 921 | WP_000454068.1 | ribonuclease Z | - |
| OCX19_RS07955 (1629233) | 1629233..1630717 | + | 1485 | WP_117200968.1 | glucose-6-phosphate dehydrogenase | - |
| OCX19_RS07960 (1630947) | 1630947..1631813 | + | 867 | WP_000382586.1 | AraC family transcriptional regulator | - |
| OCX19_RS07965 (1631895) | 1631895..1633544 | - | 1650 | WP_001041916.1 | alpha-glucosidase | - |
| OCX19_RS07970 (1633560) | 1633560..1634579 | - | 1020 | WP_000256340.1 | LacI family DNA-binding transcriptional regulator | - |
| OCX19_RS07975 (1634580) | 1634580..1634834 | - | 255 | WP_001837949.1 | hypothetical protein | - |
| OCX19_RS07980 (1634773) | 1634773..1635144 | - | 372 | WP_000413427.1 | VOC family protein | - |
| OCX19_RS07985 (1635363) | 1635363..1636769 | - | 1407 | WP_261921419.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|