MGE detailed information
MGE type: Prophage MGE length: 55488 bp
Accession: NZ_AP024728 Location: 2038946..2094433 Organism: Staphylococcus aureus strain 59553 Replicon: chromosome
Accession: NZ_AP024728 Location: 2038946..2094433 Organism: Staphylococcus aureus strain 59553 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCX18_RS10000 (2035136) | 2035136..2035426 | - | 291 | WP_001792929.1 | MAP domain-containing protein | - |
| OCX18_RS10005 (2035437) | 2035437..2035808 | - | 372 | WP_223200578.1 | MAP domain-containing protein | - |
| OCX18_RS10010 (2035782) | 2035782..2037185 | - | 1404 | Protein_1934 | extracellular adherence protein Eap/Map | - |
| OCX18_RS10015 (2037574) | 2037574..2037771 | + | 198 | WP_000239610.1 | phospholipase | - |
| OCX18_RS10020 (2038143) | 2038143..2038322 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| OCX18_RS10025 (2038633) | 2038633..2038893 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| OCX18_RS10030 (2038946) | 2038946..2039296 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| OCX18_RS10035 (2039807) | 2039807..2040142 | - | 336 | Protein_1939 | SH3 domain-containing protein | - |
| OCX18_RS10040 (2040793) | 2040793..2041284 | - | 492 | WP_000920038.1 | Staphylokinase | VF |
| OCX18_RS10045 (2041475) | 2041475..2042230 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| OCX18_RS10050 (2042242) | 2042242..2042496 | - | 255 | WP_000611512.1 | phage holin | - |
| OCX18_RS10055 (2042544) | 2042544..2042651 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - (2042573) | 2042573..2042712 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (2042573) | 2042573..2042712 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (2042573) | 2042573..2042712 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (2042573) | 2042573..2042712 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| OCX18_RS10060 (2042704) | 2042704..2042880 | - | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| OCX18_RS10065 (2042989) | 2042989..2043762 | - | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| OCX18_RS10070 (2044135) | 2044135..2044509 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| OCX18_RS10075 (2044565) | 2044565..2044852 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| OCX18_RS10080 (2044898) | 2044898..2045050 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| OCX18_RS10085 (2045043) | 2045043..2048825 | - | 3783 | WP_117219101.1 | phage tail spike protein | - |
| OCX18_RS10090 (2048841) | 2048841..2050331 | - | 1491 | WP_001154317.1 | phage tail family protein | - |
| OCX18_RS10095 (2050331) | 2050331..2054980 | - | 4650 | WP_001133533.1 | phage tail tape measure protein | - |
| OCX18_RS10100 (2055036) | 2055036..2055158 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| OCX18_RS10105 (2055218) | 2055218..2055664 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| OCX18_RS10110 (2055729) | 2055729..2056682 | - | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| OCX18_RS10115 (2056683) | 2056683..2057063 | - | 381 | WP_000611454.1 | hypothetical protein | - |
| OCX18_RS10120 (2057060) | 2057060..2057437 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| OCX18_RS10125 (2057437) | 2057437..2057772 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| OCX18_RS10130 (2057759) | 2057759..2058091 | - | 333 | WP_001177483.1 | head-tail connector protein | - |
| OCX18_RS10135 (2058100) | 2058100..2058258 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| OCX18_RS10140 (2058294) | 2058294..2059541 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| OCX18_RS10145 (2059629) | 2059629..2060213 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| OCX18_RS10150 (2060206) | 2060206..2061456 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| OCX18_RS10155 (2061462) | 2061462..2061662 | - | 201 | WP_000365299.1 | hypothetical protein | - |
| OCX18_RS10160 (2061676) | 2061676..2063370 | - | 1695 | WP_000133304.1 | phage terminase family protein | - |
| OCX18_RS10165 (2063373) | 2063373..2063840 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| OCX18_RS10170 (2063969) | 2063969..2064313 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| OCX18_RS10175 (2064329) | 2064329..2064781 | - | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| OCX18_RS10180 (2064896) | 2064896..2065366 | - | 471 | WP_000282755.1 | hypothetical protein | - |
| OCX18_RS10185 (2065389) | 2065389..2065589 | - | 201 | WP_001570807.1 | DUF1514 family protein | - |
| OCX18_RS10190 (2065589) | 2065589..2066239 | - | 651 | WP_001005262.1 | hypothetical protein | - |
| OCX18_RS10195 (2066398) | 2066398..2066547 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| OCX18_RS10200 (2066544) | 2066544..2066639 | - | 96 | Protein_1972 | DUF1381 domain-containing protein | - |
| OCX18_RS10205 (2066624) | 2066624..2066875 | - | 252 | Protein_1973 | hypothetical protein | - |
| OCX18_RS10210 (2066888) | 2066888..2067292 | - | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OCX18_RS10215 (2067301) | 2067301..2067519 | - | 219 | WP_000338527.1 | hypothetical protein | - |
| OCX18_RS10220 (2067526) | 2067526..2068419 | - | 894 | WP_000148328.1 | DnaD domain-containing protein | - |
| OCX18_RS10225 (2068449) | 2068449..2068919 | - | 471 | WP_000934765.1 | single-stranded DNA-binding protein | - |
| OCX18_RS10230 (2068920) | 2068920..2069537 | - | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| OCX18_RS10235 (2069618) | 2069618..2070538 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| OCX18_RS10240 (2070540) | 2070540..2072495 | - | 1956 | WP_064138715.1 | AAA family ATPase | - |
| OCX18_RS10245 (2072492) | 2072492..2072755 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| OCX18_RS10250 (2072764) | 2072764..2073024 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| OCX18_RS10255 (2073117) | 2073117..2073278 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| OCX18_RS10260 (2073275) | 2073275..2073595 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| OCX18_RS10265 (2073654) | 2073654..2074286 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| OCX18_RS10270 (2074301) | 2074301..2074441 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| OCX18_RS10275 (2074472) | 2074472..2074669 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| OCX18_RS10280 (2074685) | 2074685..2075434 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| OCX18_RS10285 (2075491) | 2075491..2076030 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| OCX18_RS10290 (2076054) | 2076054..2076314 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| OCX18_RS10295 (2076332) | 2076332..2076556 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| OCX18_RS10300 (2076715) | 2076715..2077485 | + | 771 | WP_001208482.1 | S24 family peptidase | - |
| OCX18_RS10305 (2077681) | 2077681..2078409 | + | 729 | WP_001033320.1 | Enterotoxin type A | VF |
| OCX18_RS10310 (2078433) | 2078433..2079161 | + | 729 | WP_000733771.1 | Enterotoxin type A | VF |
| OCX18_RS10315 (2079245) | 2079245..2080282 | + | 1038 | WP_000857182.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| OCX18_RS10320 (2080336) | 2080336..2081163 | + | 828 | Protein_1996 | Phospholipase C | VF |
| OCX18_RS10325 (2081401) | 2081401..2082417 | - | 1017 | WP_261921484.1 | putative leukocidin-like protein 1 | VF |
| OCX18_RS10330 (2082439) | 2082439..2083491 | - | 1053 | WP_000791417.1 | putative leukocidin-like protein 2 | VF |
| OCX18_RS10335 (2083927) | 2083927..2085150 | + | 1224 | WP_000206623.1 | ArgE/DapE family deacylase | - |
| OCX18_RS10340 (2085522) | 2085522..2086367 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| OCX18_RS10345 (2086429) | 2086429..2087340 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| OCX18_RS10350 (2087480) | 2087480..2088808 | + | 1329 | WP_149861555.1 | TrkH family potassium uptake protein | - |
| OCX18_RS10355 (2089653) | 2089653..2090096 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| OCX18_RS10360 (2090202) | 2090202..2090639 | - | 438 | WP_072419900.1 | hypothetical protein | - |
| OCX18_RS10365 (2090956) | 2090956..2091546 | - | 591 | WP_001293059.1 | terminase small subunit | - |
| OCX18_RS10370 (2091543) | 2091543..2091755 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| OCX18_RS10375 (2091816) | 2091816..2092362 | + | 547 | Protein_2007 | site-specific integrase | - |
| OCX18_RS10380 (2092457) | 2092457..2094073 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| OCX18_RS10385 (2094149) | 2094149..2094433 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| OCX18_RS10390 (2094608) | 2094608..2095351 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease MroQ | - |
| OCX18_RS10395 (2095377) | 2095377..2096636 | - | 1260 | WP_000120305.1 | SdrH family protein | - |
| OCX18_RS10400 (2096833) | 2096833..2097459 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| OCX18_RS10405 (2097820) | 2097820..2098605 | + | 786 | WP_000867941.1 | carbon-nitrogen family hydrolase | - |
| OCX18_RS10410 (2099204) | 2099204..2099338 | - | 135 | WP_001823225.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0 |