MGE detailed information
MGE type: Prophage MGE length: 64847 bp
Accession: NZ_AP024726 Location: 1544546..1609392 Organism: Staphylococcus aureus strain 59482 Replicon: chromosome
Accession: NZ_AP024726 Location: 1544546..1609392 Organism: Staphylococcus aureus strain 59482 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCX11_RS07405 (1540295) | 1540295..1540543 | + | 249 | WP_001151997.1 | ferredoxin | - |
| OCX11_RS07410 (1540649) | 1540649..1541194 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| OCX11_RS07415 (1541604) | 1541604..1542518 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| OCX11_RS07420 (1542575) | 1542575..1543492 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| OCX11_RS07425 (1543550) | 1543550..1544455 | - | 906 | WP_000476866.1 | DUF1672 domain-containing protein | - |
| OCX11_RS07430 (1544546) | 1544546..1544731 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| OCX11_RS07435 (1544976) | 1544976..1545431 | - | 456 | WP_000971220.1 | hypothetical protein | - |
| OCX11_RS07440 (1545428) | 1545428..1546015 | - | 588 | WP_117219087.1 | hypothetical protein | - |
| OCX11_RS07445 (1546407) | 1546407..1547861 | - | 1455 | WP_117219086.1 | N-acetylmuramoyl-L-alanine amidase | - |
| OCX11_RS07450 (1547872) | 1547872..1548174 | - | 303 | WP_000339144.1 | phage holin | - |
| OCX11_RS07455 (1548310) | 1548310..1548609 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| OCX11_RS07460 (1548655) | 1548655..1548819 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| OCX11_RS07465 (1548812) | 1548812..1549201 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| OCX11_RS07470 (1549201) | 1549201..1550667 | - | 1467 | WP_117219085.1 | BppU family phage baseplate upper protein | - |
| OCX11_RS07475 (1550667) | 1550667..1552577 | - | 1911 | WP_000429555.1 | hypothetical protein | - |
| OCX11_RS07480 (1552593) | 1552593..1552883 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| OCX11_RS07485 (1552883) | 1552883..1554466 | - | 1584 | WP_031768052.1 | prophage endopeptidase tail family protein | - |
| OCX11_RS07490 (1554475) | 1554475..1555299 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| OCX11_RS07495 (1555299) | 1555299..1561475 | - | 6177 | WP_119305742.1 | phage tail tape measure protein | - |
| OCX11_RS07500 (1561489) | 1561489..1561647 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| OCX11_RS07505 (1561689) | 1561689..1562039 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| OCX11_RS07510 (1562097) | 1562097..1562552 | - | 456 | WP_031768047.1 | Ig-like domain-containing protein | - |
| OCX11_RS07515 (1562644) | 1562644..1563285 | - | 642 | WP_117219083.1 | phage tail protein | - |
| OCX11_RS07520 (1563320) | 1563320..1563715 | - | 396 | WP_001636966.1 | DUF3168 domain-containing protein | - |
| OCX11_RS07525 (1563716) | 1563716..1564117 | - | 402 | WP_088607379.1 | hypothetical protein | - |
| OCX11_RS07530 (1564114) | 1564114..1564446 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| OCX11_RS07535 (1564458) | 1564458..1564736 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| OCX11_RS07540 (1564805) | 1564805..1565968 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| OCX11_RS07545 (1565980) | 1565980..1566753 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| OCX11_RS07550 (1566737) | 1566737..1567975 | - | 1239 | WP_001100665.1 | phage portal protein | - |
| OCX11_RS07555 (1567980) | 1567980..1569671 | - | 1692 | WP_000153544.1 | terminase large subunit | - |
| OCX11_RS07560 (1569661) | 1569661..1569966 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| OCX11_RS07565 (1570094) | 1570094..1570408 | - | 315 | WP_000160693.1 | HNH endonuclease | - |
| OCX11_RS07570 (1570565) | 1570565..1571002 | - | 438 | WP_000528512.1 | transcriptional regulator | - |
| OCX11_RS07575 (1571015) | 1571015..1572381 | - | 1367 | Protein_1486 | DEAD/DEAH box helicase | - |
| OCX11_RS07580 (1572362) | 1572362..1572652 | - | 291 | WP_000665204.1 | VRR-NUC domain-containing protein | - |
| OCX11_RS07585 (1572786) | 1572786..1572890 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| OCX11_RS07590 (1572993) | 1572993..1575440 | - | 2448 | WP_172576659.1 | virulence-associated E family protein | - |
| OCX11_RS07595 (1575492) | 1575492..1575692 | - | 201 | WP_043854698.1 | DUF1514 family protein | - |
| OCX11_RS07600 (1575760) | 1575760..1575912 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| OCX11_RS07605 (1575909) | 1575909..1576115 | - | 207 | Protein_1492 | DUF1381 domain-containing protein | - |
| OCX11_RS07610 (1576152) | 1576152..1576688 | - | 537 | WP_103150126.1 | dUTPase | - |
| OCX11_RS07615 (1576681) | 1576681..1576851 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| OCX11_RS07620 (1576838) | 1576838..1577092 | - | 255 | WP_117219082.1 | DUF1024 family protein | - |
| OCX11_RS07625 (1577284) | 1577284..1577607 | - | 324 | WP_258922478.1 | hypothetical protein | - |
| OCX11_RS07630 (1577640) | 1577640..1577786 | - | 147 | Protein_1497 | acetyltransferase | - |
| OCX11_RS07635 (1577801) | 1577801..1578049 | - | 249 | WP_117219081.1 | phi PVL orf 51-like protein | - |
| OCX11_RS07640 (1578049) | 1578049..1578303 | - | 255 | WP_000111487.1 | DUF3310 domain-containing protein | - |
| OCX11_RS07645 (1578303) | 1578303..1578704 | - | 402 | WP_000113977.1 | PVL family protein | - |
| OCX11_RS07650 (1578704) | 1578704..1578889 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| OCX11_RS07655 (1578902) | 1578902..1580854 | - | 1953 | WP_117219091.1 | DNA polymerase | - |
| OCX11_RS07660 (1580923) | 1580923..1581480 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| OCX11_RS07665 (1581506) | 1581506..1582672 | - | 1167 | WP_064129389.1 | DUF2800 domain-containing protein | - |
| OCX11_RS07670 (1582669) | 1582669..1583031 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| OCX11_RS07675 (1583046) | 1583046..1583369 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| OCX11_RS07680 (1583448) | 1583448..1583609 | - | 162 | WP_001285963.1 | DUF1270 family protein | - |
| OCX11_RS07685 (1583622) | 1583622..1583885 | - | 264 | WP_001124159.1 | helix-turn-helix domain-containing protein | - |
| OCX11_RS07690 (1583910) | 1583910..1584125 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| OCX11_RS07695 (1584180) | 1584180..1584545 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| OCX11_RS07700 (1584514) | 1584514..1584759 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| OCX11_RS07705 (1584815) | 1584815..1585024 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| OCX11_RS07710 (1585014) | 1585014..1585157 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| OCX11_RS07715 (1585186) | 1585186..1585962 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| OCX11_RS07720 (1585976) | 1585976..1586212 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| OCX11_RS07725 (1586364) | 1586364..1586678 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| OCX11_RS07730 (1586691) | 1586691..1587152 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| OCX11_RS07735 (1587170) | 1587170..1587754 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| OCX11_RS07740 (1587984) | 1587984..1588130 | + | 147 | WP_072433242.1 | hypothetical protein | - |
| OCX11_RS07745 (1588127) | 1588127..1588741 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| OCX11_RS07750 (1588867) | 1588867..1590072 | + | 1206 | WP_000264747.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| OCX11_RS07755 (1590115) | 1590115..1592142 | - | 2028 | WP_117219080.1 | hypothetical protein | - |
| OCX11_RS07760 (1592154) | 1592154..1593062 | - | 909 | WP_001793476.1 | DUF1672 domain-containing protein | - |
| OCX11_RS07765 (1593307) | 1593307..1595058 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| OCX11_RS07770 (1595039) | 1595039..1595764 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| OCX11_RS07775 (1595897) | 1595897..1596634 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| OCX11_RS07780 (1596627) | 1596627..1597169 | - | 543 | WP_000368657.1 | SMC-Scp complex subunit ScpB | - |
| OCX11_RS07785 (1597162) | 1597162..1597893 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| OCX11_RS07790 (1597985) | 1597985..1598491 | + | 507 | WP_001183427.1 | DUF309 domain-containing protein | - |
| OCX11_RS07795 (1598569) | 1598569..1599456 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| OCX11_RS07800 (1599505) | 1599505..1599954 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| OCX11_RS07805 (1600059) | 1600059..1600601 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| OCX11_RS07810 (1600683) | 1600683..1601591 | + | 909 | WP_001171352.1 | aldo/keto reductase | - |
| OCX11_RS07815 (1601807) | 1601807..1602055 | - | 249 | WP_000995799.1 | hypothetical protein | - |
| OCX11_RS07820 (1602071) | 1602071..1602826 | - | 756 | WP_117200966.1 | SDR family oxidoreductase | - |
| OCX11_RS07825 (1602968) | 1602968..1603783 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| OCX11_RS07830 (1603886) | 1603886..1604806 | - | 921 | WP_000454068.1 | ribonuclease Z | - |
| OCX11_RS07835 (1605119) | 1605119..1606603 | + | 1485 | WP_117200968.1 | glucose-6-phosphate dehydrogenase | - |
| OCX11_RS07840 (1606833) | 1606833..1607699 | + | 867 | WP_000382586.1 | AraC family transcriptional regulator | - |
| OCX11_RS07845 (1607781) | 1607781..1609392 | - | 1612 | Protein_1540 | alpha-glucosidase | - |
| OCX11_RS07850 (1609408) | 1609408..1610427 | - | 1020 | WP_000256340.1 | LacI family DNA-binding transcriptional regulator | - |
| OCX11_RS07855 (1610428) | 1610428..1610660 | - | 233 | Protein_1542 | hypothetical protein | - |
| OCX11_RS07860 (1610599) | 1610599..1610969 | - | 371 | Protein_1543 | VOC family protein | - |
| OCX11_RS07865 (1611188) | 1611188..1612594 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
| OCX11_RS07870 (1612662) | 1612662..1613795 | - | 1134 | WP_000606674.1 | tripeptidase T | - |
| OCX11_RS07875 (1614058) | 1614058..1614237 | + | 180 | WP_001789875.1 | stressosome-associated protein Prli42 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|