MGE detailed information
MGE type: Prophage MGE length: 65722 bp
Accession: NZ_AP024723 Location: 1553277..1618998 Organism: Staphylococcus aureus strain 59458 Replicon: chromosome
Accession: NZ_AP024723 Location: 1553277..1618998 Organism: Staphylococcus aureus strain 59458 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCX22_RS07435 (1549538) | 1549538..1550917 | - | 1380 | WP_000902120.1 | ATP-dependent DNA helicase RecQ | - |
| OCX22_RS07440 (1550907) | 1550907..1551860 | - | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| OCX22_RS07445 (1551968) | 1551968..1552216 | + | 249 | WP_001151997.1 | ferredoxin | - |
| OCX22_RS07450 (1552322) | 1552322..1552867 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| OCX22_RS07455 (1553277) | 1553277..1554191 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| OCX22_RS07460 (1554248) | 1554248..1555165 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| OCX22_RS07465 (1555223) | 1555223..1556128 | - | 906 | WP_000476866.1 | DUF1672 domain-containing protein | - |
| OCX22_RS07470 (1556219) | 1556219..1556434 | - | 216 | WP_000126130.1 | hypothetical protein | - |
| OCX22_RS07475 (1557156) | 1557156..1558610 | - | 1455 | WP_261921356.1 | N-acetylmuramoyl-L-alanine amidase | - |
| OCX22_RS07480 (1558621) | 1558621..1558923 | - | 303 | WP_000339146.1 | phage holin | - |
| OCX22_RS07485 (1559059) | 1559059..1559356 | - | 298 | Protein_1468 | DUF2951 domain-containing protein | - |
| OCX22_RS07490 (1559402) | 1559402..1559566 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| OCX22_RS07495 (1559559) | 1559559..1559948 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| OCX22_RS07500 (1559948) | 1559948..1561414 | - | 1467 | WP_031775920.1 | BppU family phage baseplate upper protein | - |
| OCX22_RS07505 (1561414) | 1561414..1563324 | - | 1911 | WP_044425964.1 | hypothetical protein | - |
| OCX22_RS07510 (1563340) | 1563340..1563630 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| OCX22_RS07515 (1563630) | 1563630..1565213 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| OCX22_RS07520 (1565222) | 1565222..1566046 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| OCX22_RS07525 (1566046) | 1566046..1572246 | - | 6201 | WP_031860857.1 | phage tail tape measure protein | - |
| OCX22_RS07530 (1572260) | 1572260..1572418 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| OCX22_RS07535 (1572469) | 1572469..1572810 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| OCX22_RS07540 (1572868) | 1572868..1573323 | - | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| OCX22_RS07545 (1573415) | 1573415..1574056 | - | 642 | WP_000807536.1 | phage tail protein | - |
| OCX22_RS07550 (1574091) | 1574091..1574486 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| OCX22_RS07555 (1574487) | 1574487..1574888 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| OCX22_RS07560 (1574885) | 1574885..1575217 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| OCX22_RS07565 (1575229) | 1575229..1575507 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| OCX22_RS07570 (1575576) | 1575576..1576739 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| OCX22_RS07575 (1576751) | 1576751..1577522 | - | 772 | Protein_1486 | Clp protease ClpP | - |
| OCX22_RS07580 (1577506) | 1577506..1578744 | - | 1239 | WP_001100664.1 | phage portal protein | - |
| OCX22_RS07585 (1578749) | 1578749..1580440 | - | 1692 | WP_000153544.1 | terminase large subunit | - |
| OCX22_RS07590 (1580430) | 1580430..1580735 | - | 306 | WP_261921357.1 | P27 family phage terminase small subunit | - |
| OCX22_RS07595 (1580859) | 1580859..1581173 | - | 315 | WP_000160693.1 | HNH endonuclease | - |
| OCX22_RS07600 (1581330) | 1581330..1581767 | - | 438 | WP_000528512.1 | transcriptional regulator | - |
| OCX22_RS07605 (1581780) | 1581780..1583146 | - | 1367 | Protein_1492 | DEAD/DEAH box helicase | - |
| OCX22_RS07610 (1583127) | 1583127..1583417 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| OCX22_RS07615 (1583551) | 1583551..1583649 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| OCX22_RS07620 (1583758) | 1583758..1586205 | - | 2448 | WP_000884844.1 | virulence-associated E family protein | - |
| OCX22_RS07625 (1586257) | 1586257..1586457 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| OCX22_RS07630 (1586525) | 1586525..1586677 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| OCX22_RS07635 (1586674) | 1586674..1587063 | - | 390 | WP_001596346.1 | hypothetical protein | - |
| OCX22_RS07640 (1587053) | 1587053..1587289 | - | 237 | WP_000608283.1 | hypothetical protein | - |
| OCX22_RS07645 (1587282) | 1587282..1587485 | - | 204 | WP_015988674.1 | hypothetical protein | - |
| OCX22_RS07650 (1587482) | 1587482..1587688 | - | 207 | WP_261921358.1 | DUF1381 domain-containing protein | - |
| OCX22_RS07655 (1587725) | 1587725..1588252 | - | 528 | WP_000181816.1 | dUTP pyrophosphatase | - |
| OCX22_RS07660 (1588245) | 1588245..1588487 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| OCX22_RS07665 (1588477) | 1588477..1588713 | - | 237 | WP_000370296.1 | DUF1024 family protein | - |
| OCX22_RS07670 (1588706) | 1588706..1588873 | - | 168 | WP_001813803.1 | hypothetical protein | - |
| OCX22_RS07675 (1588885) | 1588885..1589133 | - | 249 | WP_000178883.1 | phi PVL orf 51-like protein | - |
| OCX22_RS07680 (1589142) | 1589142..1589342 | - | 201 | WP_261921359.1 | hypothetical protein | - |
| OCX22_RS07685 (1589345) | 1589345..1589602 | - | 258 | WP_021285985.1 | DUF3310 domain-containing protein | - |
| OCX22_RS07690 (1589602) | 1589602..1590003 | - | 402 | WP_261921360.1 | SA1788 family PVL leukocidin-associated protein | - |
| OCX22_RS07695 (1590003) | 1590003..1590188 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| OCX22_RS07700 (1590201) | 1590201..1592153 | - | 1953 | WP_261921361.1 | DNA polymerase | - |
| OCX22_RS07705 (1592222) | 1592222..1592779 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| OCX22_RS07710 (1592805) | 1592805..1593971 | - | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| OCX22_RS07715 (1593968) | 1593968..1594330 | - | 363 | WP_000985984.1 | hypothetical protein | - |
| OCX22_RS07720 (1594345) | 1594345..1594668 | - | 324 | WP_000175001.1 | hypothetical protein | - |
| OCX22_RS07725 (1594747) | 1594747..1594908 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| OCX22_RS07730 (1594921) | 1594921..1595184 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| OCX22_RS07735 (1595209) | 1595209..1595424 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| OCX22_RS07740 (1595479) | 1595479..1595844 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| OCX22_RS07745 (1595813) | 1595813..1596058 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| OCX22_RS07750 (1596114) | 1596114..1596323 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| OCX22_RS07755 (1596313) | 1596313..1596456 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| OCX22_RS07760 (1596485) | 1596485..1597261 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| OCX22_RS07765 (1597275) | 1597275..1597511 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| OCX22_RS07770 (1597663) | 1597663..1597977 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| OCX22_RS07775 (1597990) | 1597990..1598451 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| OCX22_RS07780 (1598469) | 1598469..1599053 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| OCX22_RS07785 (1599283) | 1599283..1599429 | + | 147 | WP_261921362.1 | hypothetical protein | - |
| OCX22_RS07790 (1599426) | 1599426..1600040 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| OCX22_RS07795 (1600166) | 1600166..1601371 | + | 1206 | WP_031864865.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| OCX22_RS07800 (1601414) | 1601414..1603441 | - | 2028 | WP_001793477.1 | hypothetical protein | - |
| OCX22_RS07805 (1603453) | 1603453..1604361 | - | 909 | WP_001793476.1 | DUF1672 domain-containing protein | - |
| OCX22_RS07810 (1604606) | 1604606..1606357 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| OCX22_RS07815 (1606338) | 1606338..1607063 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| OCX22_RS07820 (1607196) | 1607196..1607933 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| OCX22_RS07825 (1607926) | 1607926..1608468 | - | 543 | WP_000368657.1 | SMC-Scp complex subunit ScpB | - |
| OCX22_RS07830 (1608461) | 1608461..1609192 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| OCX22_RS07835 (1609284) | 1609284..1609790 | + | 507 | WP_001183427.1 | DUF309 domain-containing protein | - |
| OCX22_RS07840 (1609868) | 1609868..1610755 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| OCX22_RS07845 (1610804) | 1610804..1611253 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| OCX22_RS07850 (1611358) | 1611358..1611900 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| OCX22_RS07855 (1611982) | 1611982..1612890 | + | 909 | WP_001171352.1 | aldo/keto reductase | - |
| OCX22_RS07860 (1613106) | 1613106..1613354 | - | 249 | WP_000995799.1 | hypothetical protein | - |
| OCX22_RS07865 (1613370) | 1613370..1614125 | - | 756 | WP_117200966.1 | SDR family oxidoreductase | - |
| OCX22_RS07870 (1614267) | 1614267..1615082 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| OCX22_RS07875 (1615185) | 1615185..1616105 | - | 921 | WP_000454068.1 | ribonuclease Z | - |
| OCX22_RS07880 (1616418) | 1616418..1617902 | + | 1485 | WP_117200968.1 | glucose-6-phosphate dehydrogenase | - |
| OCX22_RS07885 (1618132) | 1618132..1618998 | + | 867 | WP_000382586.1 | AraC family transcriptional regulator | - |
| OCX22_RS07890 (1619080) | 1619080..1620729 | - | 1650 | WP_001041916.1 | alpha-glucosidase | - |
| OCX22_RS07895 (1620745) | 1620745..1621764 | - | 1020 | WP_000256340.1 | LacI family DNA-binding transcriptional regulator | - |
| OCX22_RS07900 (1621765) | 1621765..1622019 | - | 255 | WP_001837949.1 | hypothetical protein | - |
| OCX22_RS07905 (1621958) | 1621958..1622329 | - | 372 | WP_000413427.1 | VOC family protein | - |
| OCX22_RS07910 (1622548) | 1622548..1623954 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|