MGE detailed information
MGE type: IS/Tn MGE length: 1212 bp
Accession: NZ_AP024548 Location: 28784..29995 Organism: Vibrio cholerae strain BCH-01536 Replicon: chromosome
Accession: NZ_AP024548 Location: 28784..29995 Organism: Vibrio cholerae strain BCH-01536 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J77_RS14000 | 23874..24116 | - | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J77_RS14005 | 24360..24746 | + | 387 | WP_001015867.1 | NUDIX hydrolase | - |
| K6J77_RS14010 | 24803..24916 | + | 114 | WP_001900214.1 | hypothetical protein | - |
| K6J77_RS14015 | 24925..25146 | + | 222 | WP_032467793.1 | DUF1289 domain-containing protein | - |
| K6J77_RS14020 | 25404..25940 | + | 537 | WP_000469482.1 | GNAT family protein | - |
| K6J77_RS14025 | 26131..26592 | + | 462 | WP_001903091.1 | lipocalin family protein | - |
| K6J77_RS18940 | 26657..26725 | + | 69 | Protein_40 | acetyltransferase | - |
| K6J77_RS14030 | 26742..27238 | - | 497 | Protein_41 | GNAT family N-acetyltransferase | - |
| K6J77_RS14035 | 27235..27507 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | - |
| K6J77_RS14040 | 27900..28025 | + | 126 | WP_001900195.1 | DUF645 family protein | - |
| K6J77_RS14050 | 28275..28721 | + | 447 | WP_000006157.1 | hypothetical protein | - |
| K6J77_RS14055 | 28784..29995 | + | 1212 | WP_001122813.1 | IS256 family transposase ISSod18 | Transposase |
| K6J77_RS14060 | 30182..30451 | - | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| K6J77_RS14065 | 30444..30722 | - | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K6J77_RS18945 | 30773..30890 | + | 118 | Protein_48 | DUF3265 domain-containing protein | - |
| K6J77_RS14070 | 31008..31286 | + | 279 | WP_001921601.1 | DUF3709 domain-containing protein | - |
| K6J77_RS18950 | 31646..31744 | + | 99 | WP_223225486.1 | DUF3709 domain-containing protein | - |
| K6J77_RS14080 | 31944..32045 | + | 102 | WP_001921603.1 | hypothetical protein | - |
| K6J77_RS14085 | 32035..32421 | + | 387 | WP_000703163.1 | VOC family protein | - |
| K6J77_RS14090 | 32616..32867 | + | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| K6J77_RS18955 | 32840..32989 | + | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| K6J77_RS14095 | 33081..33323 | + | 243 | WP_000107461.1 | hypothetical protein | - |
| K6J77_RS14100 | 33575..33853 | + | 279 | WP_000280324.1 | DUF3709 domain-containing protein | - |
| K6J77_RS18960 | 34285..34328 | + | 44 | Protein_57 | hypothetical protein | - |
| K6J77_RS18965 | 34310..34403 | + | 94 | Protein_58 | ggdef family protein | - |
| K6J77_RS18970 | 34372..34503 | + | 132 | WP_001883067.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|