MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 129157 bp
Accession: NZ_AP024354 Location: 947520..1076676 Organism: Pseudomonas alcaligenes strain KAM426 Replicon: chromosome
Accession: NZ_AP024354 Location: 947520..1076676 Organism: Pseudomonas alcaligenes strain KAM426 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JUH08_RS04380 () | 942547..944916 | - | 2370 | WP_203790860.1 | DUF1631 domain-containing protein | - |
| JUH08_RS04400 () | 945462..946757 | - | 1296 | WP_203790862.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| JUH08_RS04405 () | 946818..946991 | - | 174 | WP_061905382.1 | DUF3094 domain-containing protein | - |
| JUH08_RS04410 () | 947033..947515 | - | 483 | WP_203790864.1 | MOSC domain-containing protein | - |
| JUH08_RS04415 () | 947512..948138 | - | 627 | WP_021702227.1 | DUF1780 domain-containing protein | - |
| JUH08_RS04420 () | 948210..948626 | + | 417 | WP_203790866.1 | GNAT family N-acetyltransferase | - |
| JUH08_RS04425 () | 948630..949106 | + | 477 | WP_203790868.1 | FAD/FMN-containing dehydrogenase | - |
| JUH08_RS04430 () | 949103..949798 | + | 696 | WP_021702224.1 | energy-coupling factor ABC transporter permease | - |
| JUH08_RS04435 () | 949888..950103 | + | 216 | WP_203790870.1 | hypothetical protein | - |
| JUH08_RS04440 () | 950107..950301 | - | 195 | WP_021702222.1 | DNA gyrase inhibitor YacG | - |
| JUH08_RS04445 () | 950298..950909 | - | 612 | WP_203790872.1 | dephospho-CoA kinase | - |
| JUH08_RS04450 () | 950906..951778 | - | 873 | WP_203790874.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JUH08_RS04455 () | 951780..953000 | - | 1221 | WP_203790876.1 | Type II secretion system protein F | VF |
| JUH08_RS04460 () | 953007..954707 | - | 1701 | WP_203790878.1 | Type II secretion system protein E | VF |
| JUH08_RS04465 () | 954933..955391 | + | 459 | WP_203790880.1 | pilin | - |
| JUH08_RS04470 () | 955454..956644 | + | 1191 | WP_203790882.1 | hypothetical protein | - |
| JUH08_RS04475 () | 956641..957741 | + | 1101 | WP_203790884.1 | serine hydrolase | - |
| JUH08_RS04480 () | 957893..958741 | - | 849 | WP_203790886.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| JUH08_RS04485 () | 959052..961400 | + | 2349 | WP_203790889.1 | DUF1631 domain-containing protein | - |
| JUH08_RS04490 () | 961492..962055 | + | 564 | WP_203790891.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| JUH08_RS04495 () | 962052..962873 | + | 822 | WP_203790893.1 | regulatory signaling modulator protein AmpE | - |
| JUH08_RS04500 () | 962874..963761 | - | 888 | WP_203790894.1 | ROK family protein | - |
| JUH08_RS04505 () | 963943..965973 | + | 2031 | WP_203790896.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| JUH08_RS04510 () | 966054..966842 | - | 789 | WP_203790898.1 | TatD family hydrolase | - |
| JUH08_RS04515 () | 967407..968750 | + | 1344 | WP_203790900.1 | DEAD/DEAH box helicase | - |
| JUH08_RS04520 () | 968756..969202 | - | 447 | WP_021702208.1 | PAS domain-containing protein | - |
| JUH08_RS04525 () | 969206..970216 | - | 1011 | WP_203790902.1 | Transcriptional regulatory protein ZraR | VF |
| JUH08_RS04530 () | 970262..971980 | - | 1719 | WP_203790909.1 | diguanylate cyclase | - |
| JUH08_RS04535 () | 971977..973014 | - | 1038 | WP_203790911.1 | extracellular solute-binding protein | - |
| JUH08_RS04540 () | 973138..973992 | + | 855 | WP_061905345.1 | mechanosensitive ion channel family protein | - |
| JUH08_RS04545 () | 974002..974769 | - | 768 | WP_203790913.1 | tetratricopeptide repeat protein | - |
| JUH08_RS04550 () | 974843..975424 | - | 582 | WP_142136567.1 | TIGR00730 family Rossman fold protein | - |
| JUH08_RS04555 () | 975657..976538 | - | 882 | WP_203790915.1 | hypothetical protein | - |
| JUH08_RS04560 () | 976594..977166 | - | 573 | WP_021702200.1 | HupE/UreJ family protein | - |
| JUH08_RS04565 () | 977177..977791 | - | 615 | WP_061905341.1 | Urease accessory protein UreG | VF |
| JUH08_RS04570 () | 977808..978482 | - | 675 | WP_203790916.1 | urease accessory protein UreF | - |
| JUH08_RS04575 () | 978479..978979 | - | 501 | WP_021702197.1 | urease accessory protein UreE | - |
| JUH08_RS04580 () | 979133..979768 | - | 636 | WP_061905339.1 | HTH-type transcriptional repressor FabR | - |
| JUH08_RS04585 () | 979909..980991 | + | 1083 | WP_203790918.1 | iron-sulfur cluster-binding domain-containing protein | - |
| JUH08_RS04590 () | 980984..982081 | + | 1098 | WP_169919816.1 | fatty acid desaturase | - |
| JUH08_RS04595 () | 982127..982459 | - | 333 | WP_203790920.1 | hypothetical protein | - |
| JUH08_RS04600 () | 982593..983321 | - | 729 | WP_203790922.1 | class I SAM-dependent methyltransferase | - |
| JUH08_RS04605 () | 983344..984285 | - | 942 | WP_061905334.1 | flippase-like domain-containing protein | - |
| JUH08_RS04610 () | 984919..986358 | + | 1440 | WP_203790924.1 | sodium:solute symporter family protein | - |
| JUH08_RS04615 () | 986526..987107 | - | 582 | WP_203790926.1 | HutD family protein | - |
| JUH08_RS04620 () | 987290..988507 | + | 1218 | WP_203790928.1 | imidazolonepropionase | - |
| JUH08_RS04625 () | 988497..989432 | + | 936 | WP_203790930.1 | formimidoylglutamase | - |
| JUH08_RS04630 () | 989459..991123 | + | 1665 | WP_203790932.1 | urocanate hydratase | - |
| JUH08_RS04635 () | 991280..992815 | + | 1536 | WP_203790941.1 | histidine ammonia-lyase | - |
| JUH08_RS04640 () | 993105..993815 | + | 711 | WP_203790943.1 | histidine utilization repressor | - |
| JUH08_RS04645 () | 993903..994835 | + | 933 | WP_203790945.1 | ABC transporter ATP-binding protein | - |
| JUH08_RS04650 () | 994832..995593 | + | 762 | WP_021702182.1 | ABC transporter permease | - |
| JUH08_RS04655 () | 995658..997034 | - | 1377 | WP_203790956.1 | L-serine ammonia-lyase | - |
| JUH08_RS04660 () | 997129..998163 | - | 1035 | WP_203790964.1 | AraC family transcriptional regulator | - |
| JUH08_RS04665 () | 998174..999091 | - | 918 | WP_203790966.1 | GGDEF domain-containing protein | - |
| JUH08_RS04670 () | 999431..1001944 | + | 2514 | WP_203790974.1 | TonB-dependent receptor | - |
| JUH08_RS04675 () | 1002121..1004037 | + | 1917 | WP_203790981.1 | phytase | - |
| JUH08_RS04680 () | 1004162..1004866 | + | 705 | WP_203790983.1 | protein TolQ | - |
| JUH08_RS04685 () | 1004875..1005321 | + | 447 | WP_203790985.1 | protein TolR | - |
| JUH08_RS04690 () | 1005333..1006109 | + | 777 | WP_203792337.1 | IgA-specific serine endopeptidase autotransporter | VF |
| JUH08_RS04695 () | 1006207..1008159 | + | 1953 | WP_203790987.1 | PhoX family phosphatase | - |
| JUH08_RS04700 () | 1008273..1008686 | + | 414 | WP_169919733.1 | group II truncated hemoglobin | - |
| JUH08_RS04705 () | 1008697..1009209 | + | 513 | WP_203790990.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| JUH08_RS04710 () | 1009402..1011243 | + | 1842 | WP_203792339.1 | potassium transporter Kup | - |
| JUH08_RS04715 () | 1011307..1013658 | + | 2352 | WP_203790992.1 | DNA polymerase II | - |
| JUH08_RS04720 () | 1013599..1015008 | - | 1410 | WP_203792343.1 | diguanylate cyclase | - |
| JUH08_RS04725 () | 1015978..1016247 | + | 270 | WP_203790994.1 | hypothetical protein | - |
| JUH08_RS04730 () | 1016244..1016804 | + | 561 | WP_203790996.1 | zeta toxin family protein | - |
| JUH08_RS04735 () | 1016816..1017978 | + | 1163 | WP_128688142.1 | IS3 family transposase IS222 | Transposase |
| JUH08_RS04740 () | 1018262..1018822 | - | 561 | WP_203790998.1 | hypothetical protein | - |
| JUH08_RS04745 () | 1018908..1019123 | - | 216 | WP_203791000.1 | hypothetical protein | - |
| JUH08_RS04750 () | 1019395..1019601 | + | 207 | WP_203791002.1 | hypothetical protein | - |
| JUH08_RS04755 () | 1019944..1020447 | - | 504 | WP_088177213.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| JUH08_RS04760 () | 1020444..1020770 | - | 327 | WP_088177212.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| JUH08_RS04765 () | 1021026..1022351 | + | 1326 | WP_088177214.1 | HipA domain-containing protein | Toxin Detail |
| JUH08_RS04770 () | 1022352..1022618 | + | 267 | WP_088177211.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| JUH08_RS04775 () | 1022666..1022869 | - | 204 | WP_088177210.1 | hypothetical protein | - |
| JUH08_RS04780 () | 1022955..1023086 | - | 132 | WP_143492042.1 | DUF4113 domain-containing protein | - |
| JUH08_RS04785 () | 1023650..1024630 | - | 981 | Protein_937 | IS5 family transposase ISPa16 | Transposase |
| JUH08_RS04790 () | 1025746..1026459 | - | 714 | WP_203791004.1 | hypothetical protein | - |
| JUH08_RS04795 () | 1026744..1027298 | + | 555 | WP_203791006.1 | hypothetical protein | - |
| JUH08_RS04800 () | 1027237..1027992 | - | 756 | WP_203788694.1 | IS21 family transposase ISPpu23 | Transposase |
| JUH08_RS04805 () | 1028010..1029524 | - | 1515 | WP_203788696.1 | IS21 family transposase ISPpu23 | Transposase |
| JUH08_RS04810 () | 1029570..1029983 | + | 414 | WP_203791008.1 | hypothetical protein | - |
| JUH08_RS04815 () | 1030397..1031665 | - | 1269 | WP_058173932.1 | hypothetical protein ; Integrase | Integrase |
| JUH08_RS04820 () | 1031821..1034268 | - | 2448 | WP_203791010.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JUH08_RS04825 () | 1034530..1035198 | - | 669 | WP_203791012.1 | hypothetical protein | - |
| JUH08_RS04830 () | 1035405..1036883 | + | 1479 | WP_203791014.1 | hypothetical protein | - |
| JUH08_RS04835 () | 1036932..1037159 | + | 228 | WP_203791016.1 | AlpA family transcriptional regulator | - |
| JUH08_RS04840 () | 1037648..1038349 | + | 702 | WP_203791018.1 | inovirus Gp2 family protein | - |
| JUH08_RS04845 () | 1038433..1039386 | + | 954 | WP_203791020.1 | inovirus-type Gp2 protein | - |
| JUH08_RS04850 () | 1039958..1040161 | + | 204 | WP_203791022.1 | DUF2790 domain-containing protein | - |
| JUH08_RS04855 () | 1040213..1041511 | - | 1299 | WP_203791024.1 | MFS transporter | - |
| JUH08_RS04860 () | 1041734..1042459 | - | 726 | WP_203791026.1 | conjugal transfer protein TraX | - |
| JUH08_RS04865 () | 1042456..1042893 | - | 438 | WP_203791027.1 | DedA family protein | - |
| JUH08_RS04870 () | 1042903..1044039 | - | 1137 | WP_203791029.1 | nickel/cobalt efflux transporter RcnA | - |
| JUH08_RS04875 () | 1044512..1044757 | + | 246 | WP_203791031.1 | hypothetical protein | - |
| JUH08_RS04880 () | 1044864..1045538 | + | 675 | WP_203792345.1 | HupE/UreJ family protein | - |
| JUH08_RS04885 () | 1045551..1046255 | + | 705 | WP_203791033.1 | transmembrane anchor protein | - |
| JUH08_RS04890 () | 1046380..1046673 | + | 294 | WP_203791041.1 | metal-sensing transcriptional repressor | - |
| JUH08_RS04895 () | 1046819..1047706 | - | 888 | WP_203791043.1 | alpha/beta hydrolase | - |
| JUH08_RS04900 () | 1047706..1050267 | - | 2562 | WP_203791051.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| JUH08_RS04905 () | 1050474..1050737 | - | 264 | WP_052165135.1 | hypothetical protein | - |
| JUH08_RS04910 () | 1050747..1051106 | - | 360 | WP_196643222.1 | hypothetical protein | - |
| JUH08_RS04915 () | 1051136..1051582 | - | 447 | WP_203791053.1 | hypothetical protein | - |
| JUH08_RS04920 () | 1052004..1053275 | - | 1272 | WP_203788979.1 | IS4 family transposase ISPa45 | Transposase |
| JUH08_RS04925 () | 1053390..1053590 | + | 201 | WP_203791055.1 | helix-turn-helix transcriptional regulator | - |
| JUH08_RS04930 () | 1053596..1054144 | - | 549 | WP_203791057.1 | hypothetical protein | - |
| JUH08_RS04935 () | 1054214..1054402 | - | 189 | WP_203791059.1 | hypothetical protein | - |
| JUH08_RS04940 () | 1054427..1054606 | - | 180 | WP_114072062.1 | carbon storage regulator CsrA | - |
| JUH08_RS04945 () | 1054671..1055606 | - | 936 | WP_203791061.1 | hydrolase or metal-binding protein | - |
| JUH08_RS04950 () | 1055685..1056689 | - | 1005 | WP_203791063.1 | YqaJ viral recombinase family protein | - |
| JUH08_RS04955 () | 1056817..1057218 | - | 402 | WP_203791065.1 | hypothetical protein | - |
| JUH08_RS04960 () | 1057374..1058342 | - | 969 | WP_203791067.1 | DUF932 domain-containing protein | - |
| JUH08_RS04965 () | 1058440..1058769 | - | 330 | WP_203791069.1 | hypothetical protein | - |
| JUH08_RS04970 () | 1058977..1059969 | + | 993 | WP_203791071.1 | hypothetical protein | - |
| JUH08_RS04975 () | 1059966..1061048 | + | 1083 | WP_203791073.1 | hypothetical protein | - |
| JUH08_RS04980 () | 1061051..1061719 | + | 669 | WP_203791075.1 | hypothetical protein | - |
| JUH08_RS04985 () | 1061749..1063005 | - | 1257 | WP_203791085.1 | Prophage integrase IntA ; Integrase | Integrase |
| JUH08_RS04995 () | 1063694..1066612 | + | 2919 | WP_203791087.1 | Sensor protein TorS | VF |
| JUH08_RS05000 () | 1066617..1066862 | - | 246 | WP_021700452.1 | hypothetical protein | - |
| JUH08_RS05005 () | 1066962..1069760 | - | 2799 | WP_203791089.1 | FAD-binding oxidoreductase | - |
| JUH08_RS05010 () | 1069904..1071049 | - | 1146 | WP_203791097.1 | FMN-dependent L-lactate dehydrogenase LldD | - |
| JUH08_RS05015 () | 1071117..1072811 | - | 1695 | WP_203791099.1 | L-lactate permease | - |
| JUH08_RS05020 () | 1073100..1073867 | + | 768 | WP_203791101.1 | FCD domain-containing protein | - |
| JUH08_RS05025 () | 1073904..1074386 | - | 483 | WP_203791109.1 | SsrA-binding protein SmpB | - |
| JUH08_RS05030 () | 1074515..1074949 | + | 435 | WP_061905293.1 | type II toxin-antitoxin system RatA family toxin | - |
| JUH08_RS05035 () | 1074942..1075247 | + | 306 | WP_021700444.1 | RnfH family protein | - |
| JUH08_RS05040 () | 1075301..1075816 | - | 516 | WP_021700443.1 | outer membrane protein assembly factor BamE | - |
| JUH08_RS05045 () | 1075914..1076324 | + | 411 | WP_021700442.1 | ferric iron uptake transcriptional regulator | - |
| JUH08_RS05050 () | 1076387..1078057 | - | 1671 | WP_203791111.1 | DNA repair protein RecN | - |
| JUH08_RS05055 () | 1078205..1078771 | + | 567 | WP_203791113.1 | nucleotide exchange factor GrpE | - |
| JUH08_RS05060 () | 1078880..1080796 | + | 1917 | WP_061905289.1 | molecular chaperone DnaK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|