MGE detailed information
MGE type: Conjugative plasmid MGE length: 127587 bp
Accession: NZ_AP024127 Location: 1..127587 Organism: Escherichia coli strain NS-NP030 Replicon: plasmid NS-NP030_P1
Accession: NZ_AP024127 Location: 1..127587 Organism: Escherichia coli strain NS-NP030 Replicon: plasmid NS-NP030_P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFJ14_RS25675 (1) | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| FFJ14_RS25680 (1263) | 1263..1643 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| FFJ14_RS25685 (1640) | 1640..1987 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| FFJ14_RS25690 (2037) | 2037..3575 | + | 1539 | WP_137546056.1 | IS66 family transposase ISEc8 | Transposase |
| FFJ14_RS25695 (3931) | 3931..4287 | + | 357 | WP_063113266.1 | conjugal transfer protein TrbA | - |
| FFJ14_RS25700 (4718) | 4718..5863 | - | 1146 | WP_063113265.1 | hypothetical protein | - |
| FFJ14_RS25705 (5920) | 5920..6201 | + | 282 | WP_063113264.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FFJ14_RS25710 (6188) | 6188..6733 | + | 546 | WP_063113263.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FFJ14_RS25715 (6663) | 6663..7004 | + | 342 | WP_074147414.1 | P-type conjugative transfer protein TrbJ | - |
| FFJ14_RS25720 (6991) | 6991..7383 | + | 393 | WP_063113261.1 | F-type conjugal transfer protein TrbF | - |
| FFJ14_RS25725 (7370) | 7370..8743 | + | 1374 | WP_063113260.1 | conjugal transfer pilus assembly protein TraH | - |
| FFJ14_RS25730 (8740) | 8740..11559 | + | 2820 | WP_063113259.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| FFJ14_RS25735 (11578) | 11578..12075 | + | 498 | WP_063113258.1 | entry exclusion protein | - |
| FFJ14_RS25740 (12107) | 12107..12838 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| FFJ14_RS25745 (13041) | 13041..13778 | + | 738 | WP_063113257.1 | hypothetical protein | - |
| FFJ14_RS25750 (13829) | 13829..15982 | + | 2154 | WP_063113256.1 | type IV conjugative transfer system coupling protein TraD | - |
| FFJ14_RS25755 (15991) | 15991..16389 | - | 399 | WP_000911317.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FFJ14_RS25760 (16389) | 16389..16616 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FFJ14_RS25765 (16698) | 16698..21968 | + | 5271 | WP_063113255.1 | Multifunctional conjugation protein TraI | Relaxase |
| FFJ14_RS25770 (21988) | 21988..22737 | + | 750 | WP_063113254.1 | conjugal transfer pilus acetylase TraX | - |
| FFJ14_RS25775 (22787) | 22787..23647 | + | 861 | WP_063113253.1 | putative protein YcjY | VF |
| FFJ14_RS25780 (23750) | 23750..24310 | + | 561 | WP_063113252.1 | fertility inhibition protein FinO | - |
| FFJ14_RS25785 (24450) | 24450..24662 | + | 213 | WP_063113251.1 | hypothetical protein | - |
| FFJ14_RS25790 (24906) | 24906..25367 | + | 462 | WP_063113250.1 | thermonuclease family protein | - |
| FFJ14_RS25795 (25413) | 25413..25622 | + | 210 | WP_063113249.1 | hemolysin expression modulator Hha | - |
| FFJ14_RS25800 (25752) | 25752..26132 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| FFJ14_RS25805 (26129) | 26129..26476 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| FFJ14_RS25810 (26526) | 26526..28064 | + | 1539 | WP_137546056.1 | IS66 family transposase ISEc8 | Transposase |
| FFJ14_RS25815 (28111) | 28111..28701 | + | 591 | Protein_28 | DUF2726 domain-containing protein | - |
| FFJ14_RS25820 (28855) | 28855..29328 | + | 474 | WP_063113281.1 | hypothetical protein | - |
| - (29471) | 29471..29530 | - | 60 | NuclAT_0 | - | - |
| - (29471) | 29471..29530 | - | 60 | NuclAT_0 | - | - |
| - (29471) | 29471..29530 | - | 60 | NuclAT_0 | - | - |
| - (29471) | 29471..29530 | - | 60 | NuclAT_0 | - | - |
| FFJ14_RS25825 (29575) | 29575..29724 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| FFJ14_RS25830 (30008) | 30008..30265 | + | 258 | WP_021553168.1 | replication regulatory protein RepA | - |
| FFJ14_RS25835 (30497) | 30497..30574 | + | 78 | WP_063113289.1 | RepA leader peptide Tap | - |
| FFJ14_RS25840 (30567) | 30567..31100 | + | 534 | WP_063113282.1 | plasmid replication initiator RepA | - |
| FFJ14_RS25845 (31090) | 31090..32112 | + | 1023 | WP_063113283.1 | plasmid replication initiator RepA | - |
| FFJ14_RS25850 (32819) | 32819..32977 | + | 159 | WP_063113284.1 | hypothetical protein | - |
| FFJ14_RS25855 (33032) | 33032..33301 | + | 270 | WP_000079930.1 | type II toxin-antitoxin system antitoxin YacA | - |
| FFJ14_RS25860 (33319) | 33319..33579 | + | 261 | Protein_37 | type II toxin-antitoxin system toxin YacB | - |
| FFJ14_RS27100 (33625) | 33625..33723 | + | 99 | Protein_38 | 3'-5' exonuclease | - |
| FFJ14_RS25865 (34032) | 34032..34271 | + | 240 | WP_042004543.1 | hypothetical protein | - |
| FFJ14_RS25870 (34558) | 34558..34809 | - | 252 | WP_033559377.1 | hypothetical protein | - |
| FFJ14_RS25875 (35415) | 35415..36579 | - | 1165 | Protein_41 | IS3 family transposase ISKpn37 | Transposase |
| FFJ14_RS25880 (36626) | 36626..36880 | + | 255 | Protein_42 | transposase | - |
| FFJ14_RS25885 (38131) | 38131..38643 | + | 513 | WP_032494174.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| FFJ14_RS25890 (38655) | 38655..41729 | + | 3075 | WP_063113286.1 | Hemolysin, chromosomal | VF |
| FFJ14_RS25895 (41800) | 41800..43923 | + | 2124 | WP_063113287.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| FFJ14_RS25900 (43942) | 43942..45378 | + | 1437 | WP_033559375.1 | Hemolysin secretion protein D, chromosomal | VF |
| FFJ14_RS25905 (45827) | 45827..46053 | + | 227 | Protein_47 | phosphoadenosine phosphosulfate reductase | - |
| FFJ14_RS25910 (46050) | 46050..46756 | + | 707 | Protein_48 | IS3 family transposase IS911 | Transposase |
| FFJ14_RS25915 (47428) | 47428..48930 | + | 1503 | Protein_49 | reverse transcriptase domain-containing protein | - |
| FFJ14_RS25920 (49011) | 49011..49472 | + | 462 | Protein_50 | IS3 family transposase ISEc17 | Transposase |
| FFJ14_RS25925 (49609) | 49609..52653 | + | 3045 | WP_057108870.1 | Dermonecrotic toxin | VF |
| FFJ14_RS27105 (52938) | 52938..53470 | + | 533 | Protein_52 | IS21 family transposase | - |
| FFJ14_RS25940 (53530) | 53530..53967 | - | 438 | Protein_53 | (Fe-S)-binding protein | - |
| FFJ14_RS25945 (54758) | 54758..55372 | + | 615 | WP_249517958.1 | helix-turn-helix domain-containing protein | - |
| FFJ14_RS25950 (55439) | 55439..55591 | + | 153 | WP_074147422.1 | IS3 family transposase ISEc17 | Transposase |
| FFJ14_RS25955 (55554) | 55554..55820 | + | 267 | Protein_56 | IS3 family transposase | - |
| FFJ14_RS27110 (56380) | 56380..56586 | + | 207 | Protein_57 | transcriptional regulator | - |
| FFJ14_RS25960 (56750) | 56750..57523 | - | 774 | WP_050938857.1 | YaiO family outer membrane beta-barrel protein | - |
| FFJ14_RS25965 (57525) | 57525..58106 | - | 582 | WP_063113291.1 | acetyltransferase | - |
| FFJ14_RS25970 (58084) | 58084..59280 | - | 1197 | WP_099746847.1 | glycosyltransferase family 2 protein | - |
| FFJ14_RS25975 (59283) | 59283..59948 | - | 666 | WP_097763994.1 | PIG-L deacetylase family protein | - |
| FFJ14_RS25980 (60044) | 60044..60193 | + | 150 | Protein_62 | IS21 family transposase | - |
| FFJ14_RS25985 (60457) | 60457..60626 | + | 170 | Protein_63 | IS110 family transposase | - |
| FFJ14_RS27115 (60665) | 60665..60884 | + | 220 | Protein_64 | hypothetical protein | - |
| FFJ14_RS25990 (60996) | 60996..61220 | - | 225 | WP_063113268.1 | hypothetical protein | - |
| FFJ14_RS25995 (61633) | 61633..62175 | - | 543 | WP_063113270.1 | chorismate mutase | - |
| FFJ14_RS26000 (62738) | 62738..62853 | - | 116 | Protein_67 | IS630 family transposase | - |
| FFJ14_RS26005 (62969) | 62969..63644 | + | 676 | Protein_68 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| FFJ14_RS26010 (63680) | 63680..64876 | + | 1197 | WP_063113271.1 | right-handed parallel beta-helix repeat-containing protein | - |
| FFJ14_RS26015 (65118) | 65118..65322 | - | 205 | Protein_70 | hypothetical protein | - |
| FFJ14_RS26020 (65319) | 65319..65621 | - | 303 | Protein_71 | transposase | - |
| FFJ14_RS26025 (65802) | 65802..73604 | + | 7803 | WP_063113272.1 | hypothetical protein | VF |
| FFJ14_RS26030 (74142) | 74142..75512 | - | 1371 | WP_063113273.1 | efflux transporter outer membrane subunit | - |
| FFJ14_RS26035 (75516) | 75516..77309 | - | 1794 | Protein_74 | Macrolide export ATP-binding/permease protein MacB | VF |
| FFJ14_RS26040 (77311) | 77311..77733 | - | 423 | Protein_75 | Macrolide export protein MacA | VF |
| FFJ14_RS26045 (79328) | 79328..79866 | + | 539 | Protein_76 | IS3 family transposase IS1351 | Transposase |
| FFJ14_RS26050 (80612) | 80612..80778 | - | 167 | Protein_77 | IS110 family transposase | - |
| FFJ14_RS26055 (81122) | 81122..82064 | + | 943 | Protein_78 | omptin family outer membrane protease | - |
| FFJ14_RS26060 (82501) | 82501..83610 | + | 1110 | WP_063113275.1 | SDR family oxidoreductase | - |
| FFJ14_RS26065 (83679) | 83679..84581 | + | 903 | WP_063113277.1 | hypothetical protein | VF |
| FFJ14_RS26070 (84955) | 84955..85140 | + | 186 | Protein_81 | hypothetical protein | - |
| FFJ14_RS26075 (85264) | 85264..86004 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| FFJ14_RS26080 (86142) | 86142..87680 | - | 1539 | WP_137546056.1 | IS66 family transposase ISEc8 | Transposase |
| FFJ14_RS26085 (87730) | 87730..88077 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| FFJ14_RS26090 (88074) | 88074..88454 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| FFJ14_RS26095 (88530) | 88530..88685 | - | 156 | WP_249517964.1 | hypothetical protein | - |
| FFJ14_RS26100 (88747) | 88747..89490 | - | 744 | WP_063113355.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FFJ14_RS26105 (89483) | 89483..89740 | - | 258 | WP_063113354.1 | conjugal transfer protein TrbE | - |
| FFJ14_RS26110 (89767) | 89767..91617 | - | 1851 | WP_063113353.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FFJ14_RS26115 (91614) | 91614..92036 | - | 423 | WP_063113352.1 | HNH endonuclease signature motif containing protein | - |
| FFJ14_RS26120 (92062) | 92062..92433 | - | 372 | WP_063113351.1 | hypothetical protein | - |
| FFJ14_RS26125 (92436) | 92436..93068 | - | 633 | WP_063113350.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FFJ14_RS27120 (93382) | 93382..93612 | - | 231 | WP_243541706.1 | hypothetical protein | - |
| FFJ14_RS26135 (94011) | 94011..94160 | - | 150 | Protein_94 | TraU family protein | - |
| FFJ14_RS26140 (94164) | 94164..94610 | - | 447 | WP_033552959.1 | hypothetical protein | - |
| FFJ14_RS26145 (95337) | 95337..95879 | - | 543 | WP_252099012.1 | hypothetical protein | - |
| FFJ14_RS26150 (95893) | 95893..96885 | - | 993 | WP_063113347.1 | conjugal transfer pilus assembly protein TraU | - |
| FFJ14_RS26155 (96882) | 96882..97514 | - | 633 | WP_063113346.1 | type-F conjugative transfer system protein TraW | - |
| FFJ14_RS26160 (97511) | 97511..97897 | - | 387 | WP_000099693.1 | type-F conjugative transfer system protein TrbI | - |
| FFJ14_RS26165 (97894) | 97894..100524 | - | 2631 | WP_063113345.1 | type IV secretion system protein TraC | - |
| FFJ14_RS26170 (100655) | 100655..101002 | - | 348 | WP_063113344.1 | hypothetical protein | - |
| FFJ14_RS26175 (100999) | 100999..101403 | - | 405 | WP_063113343.1 | hypothetical protein | - |
| FFJ14_RS26180 (101400) | 101400..101618 | - | 219 | WP_063113342.1 | hypothetical protein | - |
| FFJ14_RS26185 (101698) | 101698..102084 | - | 387 | WP_063113341.1 | hypothetical protein | - |
| FFJ14_RS26190 (102081) | 102081..102554 | - | 474 | WP_063113340.1 | hypothetical protein | - |
| FFJ14_RS26195 (102547) | 102547..102768 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| FFJ14_RS26200 (102903) | 102903..103418 | - | 516 | WP_063113339.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FFJ14_RS26205 (103415) | 103415..103666 | - | 252 | WP_063113338.1 | conjugal transfer protein TrbG | - |
| FFJ14_RS27125 (103659) | 103659..103979 | - | 321 | Protein_109 | conjugal transfer protein TrbD | - |
| FFJ14_RS26220 (103966) | 103966..104553 | - | 588 | WP_063113336.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| FFJ14_RS26225 (104543) | 104543..105973 | - | 1431 | WP_063113335.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| FFJ14_RS26230 (105973) | 105973..106701 | - | 729 | WP_021572191.1 | type-F conjugative transfer system secretin TraK | - |
| FFJ14_RS26235 (106688) | 106688..107254 | - | 567 | WP_063113334.1 | type IV conjugative transfer system protein TraE | - |
| FFJ14_RS26240 (107276) | 107276..107587 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FFJ14_RS26245 (107602) | 107602..107967 | - | 366 | WP_021572189.1 | type IV conjugative transfer system pilin TraA | - |
| FFJ14_RS26250 (108001) | 108001..108228 | - | 228 | WP_074147437.1 | conjugal transfer relaxosome protein TraY | - |
| FFJ14_RS26255 (108366) | 108366..109037 | - | 672 | WP_063113333.1 | conjugal transfer transcriptional regulator TraJ | - |
| FFJ14_RS26260 (109232) | 109232..109615 | - | 384 | WP_021572187.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FFJ14_RS26265 (109893) | 109893..110540 | + | 648 | WP_137516539.1 | hypothetical protein | VF |
| FFJ14_RS26270 (110836) | 110836..111657 | - | 822 | Protein_120 | DUF945 domain-containing protein | - |
| FFJ14_RS26275 (111776) | 111776..112063 | - | 288 | WP_000107543.1 | hypothetical protein | - |
| FFJ14_RS26280 (112852) | 112852..113043 | - | 192 | WP_001027514.1 | hypothetical protein | - |
| FFJ14_RS26285 (113040) | 113040..113504 | - | 465 | WP_063113332.1 | DUF1380 family protein | - |
| FFJ14_RS26290 (113504) | 113504..113929 | - | 426 | WP_063113331.1 | antirestriction protein | - |
| FFJ14_RS26295 (114342) | 114342..115112 | - | 771 | WP_063113330.1 | hypothetical protein | - |
| FFJ14_RS26300 (115157) | 115157..115711 | - | 555 | WP_077880571.1 | DUF1380 family protein | - |
| FFJ14_RS26305 (115605) | 115605..115826 | - | 222 | WP_063113328.1 | hypothetical protein | - |
| FFJ14_RS26310 (115827) | 115827..116510 | - | 684 | WP_063113327.1 | DNA methylase | - |
| FFJ14_RS26315 (116587) | 116587..116898 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| FFJ14_RS26320 (116895) | 116895..117797 | - | 903 | WP_077875977.1 | DUF1281 domain-containing protein | - |
| FFJ14_RS26325 (118215) | 118215..118394 | + | 180 | WP_000618107.1 | hypothetical protein | - |
| FFJ14_RS26330 (118478) | 118478..118870 | - | 393 | WP_000272015.1 | plasmid partitioning/stability family protein | - |
| FFJ14_RS26335 (118874) | 118874..119848 | - | 975 | WP_033559514.1 | plasmid segregation protein ParM | - |
| FFJ14_RS26340 (120089) | 120089..120463 | - | 375 | WP_033559513.1 | hypothetical protein | - |
| FFJ14_RS26345 (120463) | 120463..121095 | - | 633 | WP_033559512.1 | ParA family protein | - |
| FFJ14_RS26350 (121943) | 121943..122698 | - | 756 | WP_000807692.1 | replication initiation protein RepE | - |
| FFJ14_RS26355 (123256) | 123256..124062 | - | 807 | WP_063113326.1 | site-specific integrase | - |
| FFJ14_RS26360 (124063) | 124063..124368 | - | 306 | WP_063113325.1 | type II toxin-antitoxin system toxin CcdB | - |
| FFJ14_RS26365 (124370) | 124370..124588 | - | 219 | WP_063113324.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| FFJ14_RS26370 (125182) | 125182..125412 | + | 231 | WP_063113323.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| FFJ14_RS26375 (125409) | 125409..125825 | + | 417 | WP_063113322.1 | type II toxin-antitoxin system VapC family toxin | - |
| FFJ14_RS26380 (126041) | 126041..126830 | - | 790 | Protein_142 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|