MGE detailed information
MGE type: Conjugative plasmid MGE length: 127580 bp
Accession: NZ_AP024124 Location: 1..127580 Organism: Escherichia coli strain KS-NP019 Replicon: plasmid KS-NP019_P1
Accession: NZ_AP024124 Location: 1..127580 Organism: Escherichia coli strain KS-NP019 Replicon: plasmid KS-NP019_P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFG67_RS25130 (1) | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| FFG67_RS25135 (1263) | 1263..1643 | + | 381 | WP_001171554.1 | transposase | - |
| FFG67_RS25140 (1640) | 1640..1987 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| FFG67_RS25145 (2037) | 2037..3575 | + | 1539 | WP_137546056.1 | IS66-like element ISEc8 family transposase | - |
| FFG67_RS25150 (3713) | 3713..4453 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| FFG67_RS25155 (4577) | 4577..4762 | - | 186 | Protein_5 | hypothetical protein | - |
| FFG67_RS25160 (5136) | 5136..6038 | - | 903 | WP_063113277.1 | antimicrobial resistance protein Mig-14 | - |
| FFG67_RS25165 (6107) | 6107..7216 | - | 1110 | WP_063113275.1 | SDR family oxidoreductase | - |
| FFG67_RS25170 (7653) | 7653..8595 | - | 943 | Protein_8 | omptin family outer membrane protease | - |
| FFG67_RS25175 (8939) | 8939..9105 | + | 167 | Protein_9 | IS110 family transposase | - |
| FFG67_RS25180 (9851) | 9851..10389 | - | 539 | Protein_10 | integrase core domain-containing protein | - |
| FFG67_RS25185 (11984) | 11984..12406 | + | 423 | Protein_11 | biotin/lipoyl-binding protein | - |
| FFG67_RS25190 (12408) | 12408..14201 | + | 1794 | Protein_12 | ABC transporter permease | - |
| FFG67_RS25195 (14205) | 14205..15575 | + | 1371 | WP_063113273.1 | efflux transporter outer membrane subunit | - |
| FFG67_RS25200 (16113) | 16113..23915 | - | 7803 | WP_063113272.1 | DUF3491 domain-containing protein | - |
| FFG67_RS25205 (24096) | 24096..24398 | + | 303 | Protein_15 | transposase | - |
| FFG67_RS25210 (24395) | 24395..24599 | + | 205 | Protein_16 | hypothetical protein | - |
| FFG67_RS25215 (24841) | 24841..26037 | - | 1197 | WP_063113271.1 | right-handed parallel beta-helix repeat-containing protein | - |
| FFG67_RS25220 (26073) | 26073..26748 | - | 676 | Protein_18 | EAL domain-containing protein | - |
| FFG67_RS25225 (26864) | 26864..26979 | + | 116 | Protein_19 | IS630 family transposase | - |
| FFG67_RS25230 (27542) | 27542..28084 | + | 543 | WP_063113270.1 | chorismate mutase | - |
| FFG67_RS25235 (28496) | 28496..28720 | + | 225 | WP_063113268.1 | hypothetical protein | - |
| FFG67_RS26570 (28832) | 28832..29051 | - | 220 | Protein_22 | hypothetical protein | - |
| FFG67_RS25240 (29090) | 29090..29259 | - | 170 | Protein_23 | IS110 family transposase | - |
| FFG67_RS25245 (29523) | 29523..29672 | - | 150 | Protein_24 | IS21 family transposase | - |
| FFG67_RS25250 (29768) | 29768..30433 | + | 666 | WP_097763994.1 | PIG-L deacetylase family protein | - |
| FFG67_RS25255 (30436) | 30436..31632 | + | 1197 | WP_099746847.1 | glycosyltransferase family 2 protein | - |
| FFG67_RS25260 (31610) | 31610..32191 | + | 582 | WP_063113291.1 | acetyltransferase | - |
| FFG67_RS25265 (32193) | 32193..32966 | + | 774 | WP_050938857.1 | YaiO family outer membrane beta-barrel protein | - |
| FFG67_RS26575 (33130) | 33130..33336 | - | 207 | Protein_29 | transcriptional regulator | - |
| FFG67_RS25270 (33896) | 33896..34162 | - | 267 | Protein_30 | IS3 family transposase | - |
| FFG67_RS25275 (34125) | 34125..34277 | - | 153 | WP_074147422.1 | transposase | - |
| FFG67_RS25280 (34344) | 34344..34958 | - | 615 | WP_249517958.1 | helix-turn-helix domain-containing protein | - |
| FFG67_RS25285 (35749) | 35749..36186 | + | 438 | Protein_33 | (Fe-S)-binding protein | - |
| FFG67_RS26580 (36246) | 36246..36778 | - | 533 | Protein_34 | IS21 family transposase | - |
| FFG67_RS25300 (37063) | 37063..40107 | - | 3045 | WP_057108870.1 | cytotoxic necrotizing factor CNF2 | - |
| FFG67_RS25305 (40244) | 40244..40705 | - | 462 | Protein_36 | IS3 family transposase | - |
| FFG67_RS25310 (40786) | 40786..42288 | - | 1503 | Protein_37 | reverse transcriptase domain-containing protein | - |
| FFG67_RS25315 (42960) | 42960..43666 | - | 707 | Protein_38 | transposase | - |
| FFG67_RS25320 (43663) | 43663..43889 | - | 227 | Protein_39 | phosphoadenosine phosphosulfate reductase | - |
| FFG67_RS25325 (44338) | 44338..45774 | - | 1437 | WP_033559375.1 | alpha-hemolysin T1SS ABC transporter subunit HlyD | - |
| FFG67_RS25330 (45793) | 45793..47916 | - | 2124 | WP_063113287.1 | type I secretion system permease/ATPase | - |
| FFG67_RS25335 (47987) | 47987..51061 | - | 3075 | WP_063113286.1 | RTX toxin hemolysin HlyA | - |
| FFG67_RS25340 (51073) | 51073..51585 | - | 513 | WP_032494174.1 | alpha-hemolysin-activating lysine-acyltransferase HlyC | - |
| FFG67_RS25345 (52833) | 52833..53087 | - | 255 | Protein_44 | transposase | - |
| FFG67_RS25350 (53134) | 53134..54298 | + | 1165 | Protein_45 | IS3 family transposase | - |
| FFG67_RS25355 (54904) | 54904..55155 | + | 252 | WP_033559377.1 | hypothetical protein | - |
| FFG67_RS25360 (55210) | 55210..55461 | - | 252 | WP_042004542.1 | hypothetical protein | - |
| FFG67_RS25365 (55442) | 55442..55681 | - | 240 | WP_042004543.1 | hypothetical protein | - |
| FFG67_RS26585 (55990) | 55990..56088 | - | 99 | Protein_49 | 3'-5' exonuclease | - |
| FFG67_RS25370 (56134) | 56134..56394 | - | 261 | Protein_50 | type II toxin-antitoxin system toxin YacB | - |
| FFG67_RS25375 (56412) | 56412..56681 | - | 270 | WP_000079930.1 | type II toxin-antitoxin system antitoxin YacA | - |
| FFG67_RS25380 (56736) | 56736..56894 | - | 159 | WP_063113284.1 | hypothetical protein | - |
| FFG67_RS25385 (57601) | 57601..58623 | - | 1023 | WP_063113283.1 | plasmid replication initiator RepA | - |
| FFG67_RS25390 (58613) | 58613..59146 | - | 534 | WP_063113282.1 | plasmid replication initiator RepA | - |
| FFG67_RS26590 (59159) | 59159..59345 | - | 187 | Protein_55 | protein CopA/IncA | - |
| FFG67_RS25400 (59448) | 59448..59705 | - | 258 | WP_021553168.1 | replication regulatory protein RepA | - |
| FFG67_RS25405 (59989) | 59989..60138 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (60183) | 60183..60242 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (60183) | 60183..60242 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (60183) | 60183..60242 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| - (60183) | 60183..60242 | + | 60 | NuclAT_0 | - | Antitoxin Detail |
| FFG67_RS25410 (60385) | 60385..60858 | - | 474 | WP_063113281.1 | hypothetical protein | - |
| FFG67_RS25415 (61012) | 61012..61602 | - | 591 | Protein_59 | DUF2726 domain-containing protein | - |
| FFG67_RS25420 (61649) | 61649..63187 | - | 1539 | WP_137546056.1 | IS66-like element ISEc8 family transposase | - |
| FFG67_RS25425 (63237) | 63237..63584 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| FFG67_RS25430 (63581) | 63581..63961 | - | 381 | WP_001171554.1 | transposase | - |
| FFG67_RS25435 (64091) | 64091..64300 | - | 210 | WP_063113249.1 | hemolysin expression modulator Hha | - |
| FFG67_RS25440 (64346) | 64346..64807 | - | 462 | WP_063113250.1 | thermonuclease family protein | - |
| FFG67_RS25445 (65051) | 65051..65263 | - | 213 | WP_063113251.1 | hypothetical protein | - |
| FFG67_RS25450 (65403) | 65403..65963 | - | 561 | WP_063113252.1 | fertility inhibition protein FinO | - |
| FFG67_RS25455 (66066) | 66066..66926 | - | 861 | WP_063113253.1 | alpha/beta hydrolase | - |
| FFG67_RS25460 (66976) | 66976..67725 | - | 750 | WP_063113254.1 | conjugal transfer pilus acetylase TraX | - |
| FFG67_RS25465 (67745) | 67745..73015 | - | 5271 | WP_063113255.1 | conjugative transfer relaxase/helicase TraI | - |
| FFG67_RS25470 (73097) | 73097..73324 | + | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FFG67_RS25475 (73324) | 73324..73722 | + | 399 | WP_000911317.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FFG67_RS25480 (73731) | 73731..75884 | - | 2154 | WP_063113256.1 | type IV conjugative transfer system coupling protein TraD | - |
| FFG67_RS25485 (75935) | 75935..76672 | - | 738 | WP_063113257.1 | hypothetical protein | - |
| FFG67_RS25490 (76875) | 76875..77606 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| FFG67_RS25495 (77638) | 77638..78135 | - | 498 | WP_063113258.1 | entry exclusion protein | - |
| FFG67_RS25500 (78154) | 78154..80973 | - | 2820 | WP_063113259.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| FFG67_RS25505 (80970) | 80970..82343 | - | 1374 | WP_063113260.1 | conjugal transfer pilus assembly protein TraH | - |
| FFG67_RS25510 (82330) | 82330..82722 | - | 393 | WP_063113261.1 | F-type conjugal transfer protein TrbF | - |
| FFG67_RS25515 (82709) | 82709..83050 | - | 342 | WP_074147414.1 | P-type conjugative transfer protein TrbJ | - |
| FFG67_RS25520 (82980) | 82980..83525 | - | 546 | WP_063113263.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FFG67_RS25525 (83512) | 83512..83793 | - | 282 | WP_063113264.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FFG67_RS25530 (83850) | 83850..84995 | + | 1146 | WP_063113265.1 | hypothetical protein | - |
| FFG67_RS25535 (85426) | 85426..85782 | - | 357 | WP_063113266.1 | conjugal transfer protein TrbA | - |
| FFG67_RS25540 (86138) | 86138..87676 | - | 1539 | WP_137546056.1 | IS66-like element ISEc8 family transposase | - |
| FFG67_RS25545 (87726) | 87726..88073 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| FFG67_RS25550 (88070) | 88070..88450 | - | 381 | WP_001171554.1 | transposase | - |
| FFG67_RS25555 (88526) | 88526..88681 | - | 156 | WP_249517964.1 | hypothetical protein | - |
| FFG67_RS25560 (88743) | 88743..89486 | - | 744 | WP_063113355.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FFG67_RS25565 (89479) | 89479..89736 | - | 258 | WP_063113354.1 | conjugal transfer protein TrbE | - |
| FFG67_RS25570 (89763) | 89763..91613 | - | 1851 | WP_063113353.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FFG67_RS25575 (91610) | 91610..92032 | - | 423 | WP_063113352.1 | HNH endonuclease signature motif containing protein | - |
| FFG67_RS25580 (92058) | 92058..92429 | - | 372 | WP_063113351.1 | hypothetical protein | - |
| FFG67_RS25585 (92432) | 92432..93064 | - | 633 | WP_063113350.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FFG67_RS26595 (93378) | 93378..93608 | - | 231 | WP_243541706.1 | hypothetical protein | - |
| FFG67_RS25595 (94007) | 94007..94156 | - | 150 | Protein_95 | TraU family protein | - |
| FFG67_RS25600 (94160) | 94160..94606 | - | 447 | WP_033552959.1 | hypothetical protein | - |
| FFG67_RS25605 (95333) | 95333..95767 | - | 435 | WP_063113348.1 | hypothetical protein | - |
| FFG67_RS25610 (95889) | 95889..96881 | - | 993 | WP_063113347.1 | conjugal transfer pilus assembly protein TraU | - |
| FFG67_RS25615 (96878) | 96878..97510 | - | 633 | WP_063113346.1 | type-F conjugative transfer system protein TraW | - |
| FFG67_RS25620 (97507) | 97507..97893 | - | 387 | WP_000099693.1 | type-F conjugative transfer system protein TrbI | - |
| FFG67_RS25625 (97890) | 97890..100520 | - | 2631 | WP_063113345.1 | type IV secretion system protein TraC | - |
| FFG67_RS25630 (100651) | 100651..100998 | - | 348 | WP_063113344.1 | hypothetical protein | - |
| FFG67_RS25635 (100995) | 100995..101399 | - | 405 | WP_063113343.1 | hypothetical protein | - |
| FFG67_RS25640 (101396) | 101396..101614 | - | 219 | WP_063113342.1 | hypothetical protein | - |
| FFG67_RS25645 (101694) | 101694..102080 | - | 387 | WP_063113341.1 | hypothetical protein | - |
| FFG67_RS25650 (102077) | 102077..102550 | - | 474 | WP_063113340.1 | hypothetical protein | - |
| FFG67_RS25655 (102543) | 102543..102764 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| FFG67_RS25660 (102899) | 102899..103414 | - | 516 | WP_063113339.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FFG67_RS25665 (103411) | 103411..103662 | - | 252 | WP_063113338.1 | conjugal transfer protein TrbG | - |
| FFG67_RS26600 (103655) | 103655..103975 | - | 321 | Protein_110 | conjugal transfer protein TrbD | - |
| FFG67_RS25680 (103962) | 103962..104549 | - | 588 | WP_063113336.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| FFG67_RS25685 (104539) | 104539..105969 | - | 1431 | WP_063113335.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| FFG67_RS25690 (105969) | 105969..106697 | - | 729 | WP_021572191.1 | type-F conjugative transfer system secretin TraK | - |
| FFG67_RS25695 (106684) | 106684..107250 | - | 567 | WP_063113334.1 | type IV conjugative transfer system protein TraE | - |
| FFG67_RS25700 (107272) | 107272..107583 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FFG67_RS25705 (107598) | 107598..107963 | - | 366 | WP_021572189.1 | type IV conjugative transfer system pilin TraA | - |
| FFG67_RS25710 (107997) | 107997..108224 | - | 228 | WP_074147437.1 | conjugal transfer relaxosome protein TraY | - |
| FFG67_RS25715 (108362) | 108362..109033 | - | 672 | WP_063113333.1 | conjugal transfer transcriptional regulator TraJ | - |
| FFG67_RS25720 (109228) | 109228..109611 | - | 384 | WP_021572187.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FFG67_RS25725 (109889) | 109889..110536 | + | 648 | WP_137516539.1 | transglycosylase SLT domain-containing protein | - |
| FFG67_RS25730 (110832) | 110832..111653 | - | 822 | Protein_121 | DUF945 domain-containing protein | - |
| FFG67_RS25735 (111772) | 111772..112059 | - | 288 | WP_000107543.1 | hypothetical protein | - |
| FFG67_RS25740 (112848) | 112848..113039 | - | 192 | WP_001027514.1 | hypothetical protein | - |
| FFG67_RS25745 (113036) | 113036..113500 | - | 465 | WP_063113332.1 | DUF1380 family protein | - |
| FFG67_RS25750 (113500) | 113500..113925 | - | 426 | WP_063113331.1 | antirestriction protein | - |
| FFG67_RS25755 (114338) | 114338..115108 | - | 771 | WP_063113330.1 | hypothetical protein | - |
| FFG67_RS25760 (115153) | 115153..115707 | - | 555 | WP_077880571.1 | DUF1380 family protein | - |
| FFG67_RS25765 (115601) | 115601..115822 | - | 222 | WP_063113328.1 | hypothetical protein | - |
| FFG67_RS25770 (115823) | 115823..116506 | - | 684 | WP_063113327.1 | DNA methylase | - |
| FFG67_RS25775 (116583) | 116583..116894 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| FFG67_RS25780 (116891) | 116891..117793 | - | 903 | WP_077875977.1 | DUF1281 domain-containing protein | - |
| FFG67_RS25785 (118211) | 118211..118390 | + | 180 | WP_000618107.1 | hypothetical protein | - |
| FFG67_RS25790 (118474) | 118474..118866 | - | 393 | WP_000272015.1 | plasmid partitioning/stability family protein | - |
| FFG67_RS25795 (118870) | 118870..119844 | - | 975 | WP_033559514.1 | plasmid segregation protein ParM | - |
| FFG67_RS25800 (120088) | 120088..120462 | - | 375 | WP_033559513.1 | hypothetical protein | - |
| FFG67_RS25805 (120462) | 120462..121094 | - | 633 | WP_033559512.1 | ParA family protein | - |
| FFG67_RS25810 (121942) | 121942..122697 | - | 756 | WP_000807692.1 | replication initiation protein RepE | - |
| FFG67_RS25815 (123255) | 123255..124061 | - | 807 | WP_063113326.1 | site-specific integrase | - |
| FFG67_RS25820 (124062) | 124062..124367 | - | 306 | WP_063113325.1 | type II toxin-antitoxin system toxin CcdB | - |
| FFG67_RS25825 (124369) | 124369..124587 | - | 219 | WP_063113324.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| FFG67_RS25830 (125175) | 125175..125405 | + | 231 | WP_063113323.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| FFG67_RS25835 (125402) | 125402..125818 | + | 417 | WP_063113322.1 | type II toxin-antitoxin system VapC family toxin | - |
| FFG67_RS25840 (126034) | 126034..126823 | - | 790 | Protein_143 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|