MGE detailed information
MGE type: Conjugative plasmid MGE length: 95339 bp
Accession: NZ_AP024116 Location: 1..95339 Organism: Escherichia coli strain JML285 Replicon: plasmid JML285_P2
Accession: NZ_AP024116 Location: 1..95339 Organism: Escherichia coli strain JML285 Replicon: plasmid JML285_P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFF71_RS24555 (1) | 1..858 | + | 858 | WP_040084616.1 | incFII family plasmid replication initiator RepA | - |
| FFF71_RS24560 (1853) | 1853..2779 | + | 927 | WP_016230921.1 | HTH-type transcriptional regulator CatM | VF |
| FFF71_RS24565 (2876) | 2876..4279 | + | 1404 | WP_016230922.1 | FAD-dependent tricarballylate dehydrogenase TcuA | - |
| FFF71_RS24570 (4266) | 4266..5405 | + | 1140 | WP_032179954.1 | tricarballylate utilization 4Fe-4S protein TcuB | - |
| FFF71_RS24575 (5460) | 5460..6755 | + | 1296 | WP_032190702.1 | tricarballylate/proton symporter TcuC | - |
| FFF71_RS24580 (7069) | 7069..7330 | + | 262 | Protein_5 | Tn3 family transposase | - |
| FFF71_RS24585 (7307) | 7307..9061 | - | 1755 | Protein_6 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FFF71_RS24590 (9062) | 9062..9454 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| FFF71_RS24595 (9592) | 9592..10476 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| FFF71_RS24600 (10508) | 10508..11707 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| FFF71_RS24605 (11813) | 11813..12463 | + | 651 | WP_031610707.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| FFF71_RS24610 (12495) | 12495..12737 | - | 243 | WP_000844627.1 | transposase | - |
| FFF71_RS24615 (12795) | 12795..15761 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FFF71_RS24620 (15765) | 15765..16325 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| FFF71_RS24625 (16550) | 16550..17563 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| FFF71_RS24630 (17821) | 17821..17907 | + | 87 | WP_012386611.1 | tetracycline resistance determinant leader peptide | - |
| FFF71_RS24635 (17923) | 17923..19842 | + | 1920 | WP_010729924.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| FFF71_RS24640 (19961) | 19961..20128 | + | 168 | WP_047655494.1 | cysteine-rich KTR domain-containing protein | - |
| FFF71_RS24645 (20188) | 20188..20250 | - | 63 | Protein_18 | XRE family transcriptional regulator | - |
| FFF71_RS24655 (20766) | 20766..21779 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| FFF71_RS24660 (22018) | 22018..22350 | + | 333 | WP_003830719.1 | quaternary ammonium compound efflux SMR transporter QacG2 | - |
| FFF71_RS24665 (22555) | 22555..23178 | - | 624 | WP_003155741.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| FFF71_RS24670 (23240) | 23240..24457 | - | 1218 | WP_006122485.1 | TniQ family protein | - |
| FFF71_RS24675 (24454) | 24454..25362 | - | 909 | WP_003155746.1 | TniB family NTP-binding protein | - |
| FFF71_RS24680 (25365) | 25365..27044 | - | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| FFF71_RS24685 (27119) | 27119..27184 | - | 66 | Protein_25 | EAL domain-containing protein | - |
| FFF71_RS24690 (27478) | 27478..29055 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| FFF71_RS24695 (29441) | 29441..29725 | + | 285 | WP_001674495.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| FFF71_RS24700 (29725) | 29725..30000 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FFF71_RS24705 (30148) | 30148..31116 | + | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| FFF71_RS24710 (31174) | 31174..31287 | + | 114 | Protein_30 | colicin-like pore-forming protein | - |
| FFF71_RS24715 (31309) | 31309..31644 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| FFF71_RS24720 (31773) | 31773..32120 | + | 348 | WP_016230895.1 | DUF6404 family protein | - |
| FFF71_RS24725 (32138) | 32138..32728 | - | 591 | WP_000194548.1 | hypothetical protein | - |
| FFF71_RS24730 (32728) | 32728..32985 | - | 258 | WP_000371887.1 | hypothetical protein | - |
| FFF71_RS24735 (33555) | 33555..33869 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| FFF71_RS24740 (33931) | 33931..34701 | + | 771 | WP_001499400.1 | hypothetical protein | - |
| FFF71_RS24745 (34746) | 34746..35531 | + | 786 | WP_077249540.1 | site-specific integrase | - |
| FFF71_RS24750 (35669) | 35669..35944 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| FFF71_RS24755 (35938) | 35938..36582 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| FFF71_RS24760 (36811) | 36811..37782 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| FFF71_RS24765 (37787) | 37787..38179 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| FFF71_RS24770 (38184) | 38184..39455 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| FFF71_RS24775 (39455) | 39455..39892 | - | 438 | WP_021553174.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FFF71_RS24780 (39889) | 39889..40137 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| FFF71_RS24785 (40555) | 40555..41457 | + | 903 | WP_077694323.1 | DUF1281 domain-containing protein | - |
| FFF71_RS24790 (41454) | 41454..41765 | + | 312 | WP_032145103.1 | hypothetical protein | - |
| FFF71_RS24795 (41842) | 41842..42525 | + | 684 | WP_040084049.1 | DNA methylase | - |
| FFF71_RS24800 (42526) | 42526..42747 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| FFF71_RS24805 (42728) | 42728..43195 | + | 468 | WP_223720015.1 | DUF1380 family protein | - |
| FFF71_RS24810 (43246) | 43246..44016 | + | 771 | WP_040084063.1 | hypothetical protein | - |
| FFF71_RS24815 (44429) | 44429..44854 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| FFF71_RS24820 (44901) | 44901..45323 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| FFF71_RS24825 (45320) | 45320..45511 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| FFF71_RS24830 (45784) | 45784..46032 | - | 249 | WP_071556315.1 | hypothetical protein | - |
| FFF71_RS24835 (46549) | 46549..46779 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| FFF71_RS24840 (46831) | 46831..48192 | + | 1362 | WP_001554356.1 | DUF3560 domain-containing protein | - |
| FFF71_RS24845 (48240) | 48240..48803 | + | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| FFF71_RS26020 (48955) | 48955..49182 | + | 228 | WP_071594011.1 | hypothetical protein | - |
| FFF71_RS24850 (49423) | 49423..49629 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| FFF71_RS24855 (49655) | 49655..50194 | + | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| FFF71_RS24860 (50256) | 50256..50489 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| FFF71_RS24865 (50554) | 50554..52518 | + | 1965 | WP_040085083.1 | ParB/RepB/Spo0J family partition protein | - |
| FFF71_RS24870 (52587) | 52587..53021 | + | 435 | WP_040085081.1 | conjugation system SOS inhibitor PsiB | - |
| FFF71_RS24875 (53018) | 53018..53737 | + | 720 | WP_021572183.1 | plasmid SOS inhibition protein A | - |
| FFF71_RS24880 (53737) | 53737..54254 | + | 518 | Protein_65 | hypothetical protein | - |
| FFF71_RS26025 (54372) | 54372..54524 | + | 153 | Protein_66 | FlmC family protein | - |
| FFF71_RS24885 (54469) | 54469..54591 | + | 123 | WP_243546677.1 | Hok/Gef family protein | - |
| FFF71_RS26030 (55045) | 55045..55218 | - | 174 | Protein_68 | hypothetical protein | - |
| FFF71_RS26035 (55288) | 55288..55494 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| FFF71_RS24890 (55518) | 55518..55814 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| FFF71_RS24895 (55925) | 55925..56746 | + | 822 | WP_021553189.1 | DUF932 domain-containing protein | - |
| FFF71_RS24900 (57042) | 57042..57611 | - | 570 | Protein_72 | hypothetical protein | VF |
| FFF71_RS24905 (57967) | 57967..58350 | + | 384 | WP_021572187.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FFF71_RS24910 (58545) | 58545..59216 | + | 672 | WP_021572188.1 | conjugal transfer transcriptional regulator TraJ | - |
| FFF71_RS24915 (59354) | 59354..59581 | + | 228 | WP_071780467.1 | conjugal transfer relaxosome protein TraY | - |
| FFF71_RS24920 (59615) | 59615..59980 | + | 366 | WP_021572189.1 | type IV conjugative transfer system pilin TraA | - |
| FFF71_RS24925 (59995) | 59995..60306 | + | 312 | WP_040084590.1 | type IV conjugative transfer system protein TraL | - |
| FFF71_RS24930 (60328) | 60328..60894 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| FFF71_RS24935 (60881) | 60881..61609 | + | 729 | WP_040084588.1 | type-F conjugative transfer system secretin TraK | - |
| FFF71_RS24940 (61609) | 61609..63036 | + | 1428 | WP_040084586.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| FFF71_RS24945 (63026) | 63026..63613 | + | 588 | WP_040084597.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| FFF71_RS24950 (63600) | 63600..63917 | + | 318 | WP_040084584.1 | conjugal transfer protein TrbD | - |
| FFF71_RS24955 (63914) | 63914..64165 | + | 252 | WP_040084582.1 | conjugal transfer protein TrbG | - |
| FFF71_RS24960 (64162) | 64162..64677 | + | 516 | WP_040084580.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FFF71_RS24965 (64860) | 64860..65033 | + | 174 | WP_040084578.1 | conjugal transfer protein TraR | - |
| FFF71_RS24970 (65026) | 65026..65499 | + | 474 | WP_040084576.1 | hypothetical protein | - |
| FFF71_RS24975 (65579) | 65579..65797 | + | 219 | WP_040084574.1 | hypothetical protein | - |
| FFF71_RS24980 (65794) | 65794..66198 | + | 405 | WP_040084572.1 | hypothetical protein | - |
| FFF71_RS24985 (66195) | 66195..66542 | + | 348 | WP_040084570.1 | hypothetical protein | - |
| FFF71_RS24990 (66668) | 66668..69298 | + | 2631 | WP_040084569.1 | type IV secretion system protein TraC | - |
| FFF71_RS24995 (69295) | 69295..69681 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| FFF71_RS25000 (69678) | 69678..70310 | + | 633 | WP_040084567.1 | type-F conjugative transfer system protein TraW | - |
| FFF71_RS25005 (70307) | 70307..71299 | + | 993 | WP_040084565.1 | conjugal transfer pilus assembly protein TraU | - |
| FFF71_RS25010 (71320) | 71320..71499 | + | 180 | WP_001750891.1 | hypothetical protein | - |
| FFF71_RS25015 (71496) | 71496..71735 | - | 240 | WP_021572675.1 | hypothetical protein | - |
| FFF71_RS25020 (71928) | 71928..72566 | + | 639 | WP_040084562.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FFF71_RS25025 (72563) | 72563..74413 | + | 1851 | WP_040084560.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FFF71_RS25030 (74440) | 74440..74697 | + | 258 | WP_040084558.1 | conjugal transfer protein TrbE | - |
| FFF71_RS25035 (74690) | 74690..75433 | + | 744 | WP_137515286.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FFF71_RS25040 (75447) | 75447..75812 | + | 366 | WP_040084553.1 | hypothetical protein | - |
| FFF71_RS25045 (75943) | 75943..76344 | + | 402 | WP_021572668.1 | hypothetical protein | - |
| FFF71_RS25050 (76411) | 76411..76692 | + | 282 | WP_040084551.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FFF71_RS25055 (76679) | 76679..77224 | + | 546 | WP_040084549.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FFF71_RS25060 (77154) | 77154..77516 | + | 363 | WP_072025066.1 | P-type conjugative transfer protein TrbJ | - |
| FFF71_RS25065 (77516) | 77516..78889 | + | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| FFF71_RS25070 (78886) | 78886..81708 | + | 2823 | WP_040084547.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| FFF71_RS25075 (81723) | 81723..82241 | + | 519 | WP_077782869.1 | surface exclusion protein | - |
| FFF71_RS25080 (82273) | 82273..83004 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| FFF71_RS25085 (83256) | 83256..85481 | + | 2226 | WP_021572214.1 | type IV conjugative transfer system coupling protein TraD | - |
| FFF71_RS25090 (85481) | 85481..90751 | + | 5271 | WP_040084632.1 | Multifunctional conjugation protein TraI | Relaxase |
| FFF71_RS25095 (90771) | 90771..91517 | + | 747 | WP_040084630.1 | conjugal transfer pilus acetylase TraX | - |
| FFF71_RS25100 (91572) | 91572..92132 | + | 561 | WP_040084627.1 | fertility inhibition protein FinO | - |
| FFF71_RS25105 (92268) | 92268..92480 | + | 213 | WP_040084624.1 | hypothetical protein | - |
| FFF71_RS25110 (92726) | 92726..93187 | + | 462 | WP_040084621.1 | thermonuclease family protein | - |
| FFF71_RS25115 (93256) | 93256..93441 | + | 186 | WP_040084637.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| FFF71_RS25120 (93480) | 93480..94070 | + | 591 | WP_040084619.1 | DUF2726 domain-containing protein | - |
| - (94245) | 94245..94301 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| - (94245) | 94245..94301 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| - (94245) | 94245..94301 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| - (94245) | 94245..94301 | - | 57 | NuclAT_0 | - | Antitoxin Detail |
| FFF71_RS25125 (94349) | 94349..94498 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| FFF71_RS25130 (94782) | 94782..95039 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| FFF71_RS26040 (95143) | 95143..95327 | + | 185 | Protein_119 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|