MGE detailed information
MGE type: Conjugative plasmid MGE length: 109993 bp
Accession: NZ_AP024115 Location: 1..109993 Organism: Escherichia coli strain JML285 Replicon: plasmid JML285_P1
Accession: NZ_AP024115 Location: 1..109993 Organism: Escherichia coli strain JML285 Replicon: plasmid JML285_P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFF71_RS23945 (46) | 46..1077 | + | 1032 | WP_000907852.1 | plasmid replication initiator RepA | - |
| FFF71_RS23950 (1981) | 1981..2265 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| FFF71_RS23955 (2265) | 2265..2540 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FFF71_RS23960 (2646) | 2646..2849 | + | 204 | Protein_3 | hypothetical protein | - |
| FFF71_RS23965 (3351) | 3351..5150 | - | 1800 | Protein_4 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| FFF71_RS23970 (5245) | 5245..6675 | + | 1431 | Protein_5 | IS4 family transposase IS50R | Transposase |
| FFF71_RS23975 (6704) | 6704..7498 | + | 795 | WP_000572405.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| FFF71_RS23980 (7519) | 7519..7899 | + | 381 | WP_000131935.1 | bleomycin binding protein BLMT | - |
| FFF71_RS23985 (7938) | 7938..8714 | + | 777 | WP_227457005.1 | aminoglycoside phosphotransferase family protein | - |
| FFF71_RS23990 (8801) | 8801..9676 | + | 876 | WP_078081115.1 | SDR family oxidoreductase | - |
| FFF71_RS23995 (9768) | 9768..11384 | + | 1617 | WP_157918524.1 | ABC-F type ribosomal protection protein | - |
| FFF71_RS24000 (11708) | 11708..12472 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| FFF71_RS24005 (12590) | 12590..12658 | - | 69 | Protein_12 | EAL domain-containing protein | - |
| FFF71_RS24010 (12979) | 12979..13479 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| FFF71_RS24015 (13607) | 13607..14446 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| FFF71_RS24020 (14440) | 14440..14787 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| FFF71_RS24025 (14986) | 14986..15966 | - | 981 | WP_137515411.1 | SAM-dependent methyltransferase | - |
| FFF71_RS24030 (16069) | 16069..16917 | - | 849 | WP_137515412.1 | alpha/beta fold hydrolase | - |
| FFF71_RS24035 (17081) | 17081..18094 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| FFF71_RS24040 (18297) | 18297..18647 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| FFF71_RS24045 (18823) | 18823..19383 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| FFF71_RS24050 (19387) | 19387..22353 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FFF71_RS24055 (22522) | 22522..22794 | + | 273 | WP_061586528.1 | hypothetical protein | - |
| FFF71_RS24060 (22957) | 22957..23376 | + | 420 | WP_061586529.1 | hypothetical protein | - |
| FFF71_RS24065 (23755) | 23755..24117 | - | 363 | Protein_24 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| FFF71_RS24070 (24243) | 24243..24857 | + | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| FFF71_RS24075 (24922) | 24922..26051 | + | 1130 | WP_085959879.1 | IS3 family transposase IS1133 | Transposase |
| FFF71_RS24080 (26158) | 26158..26961 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| FFF71_RS24085 (26961) | 26961..27797 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| FFF71_RS24090 (27976) | 27976..28470 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| FFF71_RS24095 (28526) | 28526..29128 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| FFF71_RS24100 (29304) | 29304..30356 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| FFF71_RS24105 (30569) | 30569..31159 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| FFF71_RS24110 (31159) | 31159..31413 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| FFF71_RS24115 (31946) | 31946..32326 | + | 381 | WP_000465035.1 | hypothetical protein | - |
| FFF71_RS24120 (32328) | 32328..33107 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| FFF71_RS24125 (33287) | 33287..33931 | + | 645 | WP_001144036.1 | ParA family protein | - |
| FFF71_RS24130 (34018) | 34018..34326 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| FFF71_RS24135 (34740) | 34740..35720 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| FFF71_RS24140 (35713) | 35713..36129 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| FFF71_RS24145 (36131) | 36131..37405 | - | 1275 | WP_220571837.1 | Y-family DNA polymerase | - |
| FFF71_RS24150 (37405) | 37405..37842 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FFF71_RS24155 (37839) | 37839..38087 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| FFF71_RS24160 (38505) | 38505..39407 | + | 903 | WP_001442863.1 | DUF1281 domain-containing protein | - |
| FFF71_RS24165 (39411) | 39411..39716 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| FFF71_RS24170 (39792) | 39792..40475 | + | 684 | WP_000086144.1 | DNA methylase | - |
| FFF71_RS24175 (40476) | 40476..40697 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| FFF71_RS24180 (40678) | 40678..41145 | + | 468 | WP_223720015.1 | DUF1380 family protein | - |
| FFF71_RS24185 (41196) | 41196..41966 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| FFF71_RS24190 (42383) | 42383..42808 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| FFF71_RS24195 (42855) | 42855..43277 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| FFF71_RS24200 (43274) | 43274..43465 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| FFF71_RS24205 (43603) | 43603..43884 | + | 282 | WP_162713425.1 | hypothetical protein | - |
| FFF71_RS24210 (44235) | 44235..44762 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| FFF71_RS24215 (44820) | 44820..45053 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| FFF71_RS24220 (45112) | 45112..47070 | + | 1959 | WP_001145471.1 | ParB/RepB/Spo0J family partition protein | - |
| FFF71_RS24225 (47125) | 47125..47559 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| FFF71_RS24230 (47556) | 47556..48275 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| FFF71_RS24235 (48272) | 48272..48868 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| FFF71_RS24240 (49331) | 49331..49831 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| FFF71_RS24245 (50560) | 50560..50994 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| FFF71_RS24250 (51087) | 51087..51353 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| FFF71_RS24255 (51418) | 51418..52332 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| FFF71_RS24260 (52332) | 52332..52577 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| FFF71_RS24265 (52608) | 52608..52859 | - | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| FFF71_RS24275 (53439) | 53439..54286 | + | 848 | Protein_65 | DUF4942 domain-containing protein | - |
| FFF71_RS24280 (54369) | 54369..54703 | - | 335 | Protein_66 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| FFF71_RS24285 (54936) | 54936..55268 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| FFF71_RS24290 (55279) | 55279..57978 | + | 2700 | WP_039005629.1 | Protein TraI | Relaxase |
| FFF71_RS24295 (58004) | 58004..58576 | + | 573 | WP_000332079.1 | hypothetical protein | - |
| FFF71_RS24300 (58626) | 58626..60815 | - | 2190 | WP_000443942.1 | peptidase domain-containing ABC transporter | - |
| FFF71_RS24305 (60815) | 60815..62068 | - | 1254 | WP_001685252.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| FFF71_RS26015 (62171) | 62171..62533 | - | 363 | WP_085004988.1 | CPBP family intramembrane metalloprotease | - |
| FFF71_RS24315 (63591) | 63591..65882 | - | 2292 | WP_001289270.1 | F-type conjugative transfer protein TrbC | - |
| FFF71_RS24320 (65875) | 65875..66945 | - | 1071 | WP_000151592.1 | IncI1-type conjugal transfer protein TrbB | - |
| FFF71_RS24325 (66964) | 66964..68172 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (68352) | 68352..68412 | - | 61 | NuclAT_1 | - | - |
| - (68352) | 68352..68412 | - | 61 | NuclAT_1 | - | - |
| - (68352) | 68352..68412 | - | 61 | NuclAT_1 | - | - |
| - (68352) | 68352..68412 | - | 61 | NuclAT_1 | - | - |
| FFF71_RS24330 (68479) | 68479..69564 | - | 1086 | WP_000080543.1 | protein finQ | - |
| - (69773) | 69773..69835 | - | 63 | NuclAT_0 | - | - |
| - (69773) | 69773..69835 | - | 63 | NuclAT_0 | - | - |
| - (69773) | 69773..69835 | - | 63 | NuclAT_0 | - | - |
| - (69773) | 69773..69835 | - | 63 | NuclAT_0 | - | - |
| FFF71_RS24335 (69885) | 69885..70037 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| FFF71_RS24340 (70109) | 70109..70360 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - (70747) | 70747..70798 | - | 52 | NuclAT_2 | - | - |
| - (70747) | 70747..70798 | - | 52 | NuclAT_2 | - | - |
| - (70747) | 70747..70798 | - | 52 | NuclAT_2 | - | - |
| - (70747) | 70747..70798 | - | 52 | NuclAT_2 | - | - |
| FFF71_RS24345 (71284) | 71284..71460 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| FFF71_RS24350 (71669) | 71669..71878 | - | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| FFF71_RS24355 (71976) | 71976..72590 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| FFF71_RS24360 (72666) | 72666..74834 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| FFF71_RS24365 (74931) | 74931..75515 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| FFF71_RS24370 (75544) | 75544..76746 | - | 1203 | WP_001189154.1 | IncI1-type conjugal transfer protein TraW | - |
| FFF71_RS24375 (76713) | 76713..77327 | - | 615 | WP_137515392.1 | IncI1-type conjugal transfer protein TraV | - |
| FFF71_RS24380 (77327) | 77327..80371 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| FFF71_RS24385 (80461) | 80461..81261 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| FFF71_RS24390 (81245) | 81245..81433 | - | 189 | WP_001277252.1 | putative conjugal transfer protein TraS | - |
| FFF71_RS24395 (81497) | 81497..81901 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| FFF71_RS24400 (81952) | 81952..82479 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| FFF71_RS24405 (82479) | 82479..83183 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| FFF71_RS24410 (83183) | 83183..84472 | - | 1290 | WP_001271996.1 | conjugal transfer protein TraO | - |
| FFF71_RS24415 (84475) | 84475..85458 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| FFF71_RS24420 (85469) | 85469..86161 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| FFF71_RS24425 (86158) | 86158..86505 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| FFF71_RS24430 (86523) | 86523..90290 | - | 3768 | WP_137515391.1 | DUF5710 domain-containing protein | - |
| FFF71_RS24435 (90380) | 90380..90931 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| FFF71_RS24440 (90946) | 90946..91236 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| FFF71_RS24445 (91233) | 91233..92381 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| FFF71_RS24450 (92378) | 92378..93196 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| FFF71_RS24455 (93193) | 93193..93651 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| FFF71_RS24460 (94046) | 94046..94342 | - | 297 | Protein_102 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| FFF71_RS24465 (94397) | 94397..95101 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FFF71_RS24470 (95162) | 95162..95452 | - | 291 | Protein_104 | hypothetical protein | VF |
| FFF71_RS24475 (95469) | 95469..96554 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| FFF71_RS24480 (96567) | 96567..98120 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| FFF71_RS24485 (98131) | 98131..98583 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| FFF71_RS24490 (98570) | 98570..99865 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| FFF71_RS24495 (99858) | 99858..101540 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| FFF71_RS24500 (101597) | 101597..103135 | - | 1539 | WP_000998071.1 | IS66 family transposase ISEc8 | Transposase |
| FFF71_RS24505 (103185) | 103185..103532 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| FFF71_RS24510 (103529) | 103529..103909 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| FFF71_RS24515 (104004) | 104004..104441 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| FFF71_RS24520 (104441) | 104441..105508 | - | 1068 | WP_001442752.1 | hypothetical protein | VF |
| FFF71_RS24525 (106260) | 106260..106514 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| FFF71_RS24530 (106686) | 106686..107369 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| FFF71_RS24535 (107623) | 107623..108156 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| FFF71_RS24540 (108598) | 108598..108885 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| FFF71_RS24545 (108803) | 108803..109033 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|