MGE detailed information
MGE type: Genomic_island MGE length: 33783 bp
Accession: NZ_AP024114 Location: 4482372..4516154 Organism: Escherichia coli strain JML285 Replicon: chromosome
Accession: NZ_AP024114 Location: 4482372..4516154 Organism: Escherichia coli strain JML285 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFF71_RS21520 (4478332) | 4478332..4479195 | + | 864 | Protein_4220 | integrase arm-type DNA-binding domain-containing protein | - |
| FFF71_RS21525 (4479283) | 4479283..4480305 | + | 1023 | WP_000255956.1 | IS21-like element IS100 family transposase | - |
| FFF71_RS21530 (4480302) | 4480302..4481084 | + | 783 | WP_001317493.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| FFF71_RS21535 (4481135) | 4481135..4481551 | - | 417 | WP_243543815.1 | nuclease-related domain-containing protein | - |
| FFF71_RS21540 (4481839) | 4481839..4482132 | - | 294 | Protein_4224 | GPW/gp25 family protein | - |
| FFF71_RS21545 (4482135) | 4482135..4482392 | + | 258 | Protein_4225 | PTS ascorbate transporter subunit IIC | - |
| FFF71_RS21550 (4482691) | 4482691..4482891 | - | 201 | Protein_4226 | IS66 family transposase IS682 | Transposase |
| FFF71_RS21555 (4483298) | 4483298..4483531 | - | 234 | WP_001129783.1 | hypothetical protein | - |
| FFF71_RS21560 (4483628) | 4483628..4484251 | - | 624 | WP_001490980.1 | hypothetical protein | - |
| FFF71_RS21565 (4484756) | 4484756..4484983 | - | 228 | WP_157898391.1 | hypothetical protein | - |
| FFF71_RS21570 (4485308) | 4485308..4485787 | + | 480 | WP_000258200.1 | ProQ/FinO family protein | - |
| FFF71_RS21575 (4485806) | 4485806..4486354 | - | 549 | WP_001167447.1 | hypothetical protein | - |
| FFF71_RS21580 (4486442) | 4486442..4486600 | - | 159 | WP_000831911.1 | hypothetical protein | - |
| FFF71_RS21585 (4486883) | 4486883..4487901 | - | 1019 | Protein_4233 | IS110 family transposase ISEc11 | Transposase |
| FFF71_RS21590 (4488046) | 4488046..4488276 | - | 231 | WP_000958092.1 | AlpA family transcriptional regulator | - |
| FFF71_RS21595 (4488345) | 4488345..4488920 | - | 576 | WP_089551351.1 | hypothetical protein | - |
| FFF71_RS21600 (4488935) | 4488935..4489084 | + | 150 | WP_163424175.1 | hypothetical protein | - |
| FFF71_RS21605 (4489205) | 4489205..4489771 | - | 567 | WP_001126813.1 | inovirus-type Gp2 protein | - |
| FFF71_RS21610 (4491313) | 4491313..4492917 | - | 1605 | WP_001083417.1 | YfjI family protein | - |
| FFF71_RS21615 (4493244) | 4493244..4493975 | - | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| FFF71_RS21620 (4494645) | 4494645..4495175 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| FFF71_RS21625 (4496339) | 4496339..4497562 | - | 1224 | WP_001107213.1 | hypothetical protein | - |
| FFF71_RS21630 (4497663) | 4497663..4498547 | + | 885 | WP_001116800.1 | YfjP family GTPase | - |
| FFF71_RS21635 (4498750) | 4498750..4499430 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| FFF71_RS21640 (4499578) | 4499578..4500255 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| FFF71_RS21645 (4500261) | 4500261..4500494 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| FFF71_RS21650 (4500584) | 4500584..4501402 | + | 819 | WP_001175148.1 | DUF932 domain-containing protein | - |
| FFF71_RS21655 (4501484) | 4501484..4501963 | + | 480 | WP_000844100.1 | antirestriction protein | - |
| FFF71_RS21660 (4501979) | 4501979..4502455 | + | 477 | WP_001366855.1 | RadC family protein | - |
| FFF71_RS21665 (4502518) | 4502518..4502739 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| FFF71_RS21670 (4502819) | 4502819..4503193 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FFF71_RS21675 (4503240) | 4503240..4503617 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| FFF71_RS21680 (4503614) | 4503614..4504102 | + | 489 | WP_000761676.1 | DUF5983 family protein | - |
| FFF71_RS21685 (4504114) | 4504114..4504311 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| FFF71_RS21690 (4504396) | 4504396..4505262 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| FFF71_RS21695 (4505334) | 4505334..4505597 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| FFF71_RS21700 (4505594) | 4505594..4505920 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FFF71_RS21705 (4506803) | 4506803..4508341 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| FFF71_RS21710 (4508707) | 4508707..4510041 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| FFF71_RS21715 (4510121) | 4510121..4512268 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| FFF71_RS21720 (4512327) | 4512327..4513784 | + | 1458 | WP_040090433.1 | dipeptide/tripeptide permease DtpC | - |
| FFF71_RS21725 (4514021) | 4514021..4515538 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| FFF71_RS21730 (4515657) | 4515657..4515830 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| FFF71_RS21735 (4515858) | 4515858..4516154 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| FFF71_RS21740 (4516381) | 4516381..4516653 | - | 273 | WP_000405649.1 | GNAT family N-acetyltransferase | - |
| FFF71_RS21745 (4516665) | 4516665..4516895 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| FFF71_RS21750 (4517076) | 4517076..4518707 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| FFF71_RS21755 (4518704) | 4518704..4519423 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|