MGE detailed information
MGE type: Prophage MGE length: 42338 bp
Accession: NZ_AP023319 Location: 2066210..2108547 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4741 Replicon: chromosome
Accession: NZ_AP023319 Location: 2066210..2108547 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4741 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5619_RS10060 () | 2062403..2063299 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| K5619_RS10065 () | 2063719..2064330 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| K5619_RS10070 () | 2064339..2065349 | + | 1011 | WP_000568508.1 | Holliday junction branch migration DNA helicase RuvB | - |
| K5619_RS10075 () | 2065428..2066213 | - | 786 | WP_000571508.1 | zinc ABC transporter permease subunit ZnuB | - |
| K5619_RS10080 () | 2066210..2066965 | - | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| K5619_RS10085 () | 2067044..2067988 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| K5619_RS10090 () | 2068004..2069323 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| K5619_RS10095 () | 2069440..2070411 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| K5619_RS10100 () | 2070484..2071926 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| K5619_RS10105 () | 2072050..2072919 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| K5619_RS10110 () | 2073261..2074736 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| K5619_RS10115 () | 2074971..2076782 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| K5619_RS10120 () | 2076820..2077461 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| K5619_RS10125 () | 2077561..2078739 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K5619_RS10130 () | 2078870..2079160 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K5619_RS10135 () | 2079228..2079581 | + | 354 | WP_001042119.1 | protein YebF | - |
| K5619_RS10140 () | 2079675..2080334 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| K5619_RS10145 () | 2080547..2082598 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| K5619_RS10150 () | 2082633..2083331 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| K5619_RS10155 () | 2083355..2084011 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| K5619_RS10160 () | 2084119..2084349 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K5619_RS10165 () | 2084487..2084861 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K5619_RS10170 () | 2084862..2085737 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| K5619_RS10175 () | 2085754..2086107 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2086207..2086352 | - | 146 | - | - | Antitoxin Detail |
| - | 2086247..2086350 | + | 104 | - | - | Toxin Detail |
| K5619_RS10180 () | 2086481..2087404 | - | 924 | Protein_2000 | hypothetical protein ; Integrase | Integrase |
| K5619_RS24260 () | 2087668..2088129 | - | 462 | Protein_2001 | DNA breaking-rejoining protein | - |
| K5619_RS10190 () | 2088118..2088309 | + | 192 | Protein_2002 | glycoside hydrolase family 19 protein | - |
| K5619_RS10195 () | 2088363..2088896 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| K5619_RS10200 () | 2089153..2089320 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| K5619_RS10205 () | 2089385..2089573 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| K5619_RS10210 () | 2089628..2089888 | + | 261 | Protein_2006 | DUF1441 family protein | - |
| K5619_RS10215 () | 2090103..2090447 | + | 345 | Protein_2007 | macro domain-containing protein | - |
| K5619_RS10220 () | 2090457..2090927 | + | 471 | Protein_2008 | tail fiber assembly protein | - |
| K5619_RS10225 () | 2091024..2091224 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| K5619_RS24265 () | 2091614..2091794 | - | 181 | Protein_2010 | IS3 family transposase | - |
| K5619_RS10230 () | 2091785..2091886 | + | 102 | Protein_2011 | arsenic transporter | - |
| K5619_RS24270 () | 2092508..2092740 | + | 233 | Protein_2012 | helix-turn-helix domain-containing protein | - |
| K5619_RS10245 () | 2093067..2093681 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| K5619_RS10250 () | 2093691..2093849 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K5619_RS10255 () | 2093982..2094896 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| K5619_RS10260 () | 2096209..2096631 | - | 423 | Protein_2016 | hypothetical protein ; Integrase | Integrase |
| K5619_RS10265 () | 2096701..2097895 | + | 1195 | Protein_2017 | IS256 family transposase IS285 | Transposase |
| K5619_RS10270 () | 2098041..2098181 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| K5619_RS10275 () | 2098347..2098616 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| K5619_RS10280 () | 2098986..2099405 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| K5619_RS10285 () | 2099793..2100269 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| K5619_RS10290 () | 2100599..2100994 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| K5619_RS10295 () | 2101677..2102399 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| K5619_RS10300 () | 2102684..2102848 | + | 165 | WP_001134856.1 | membrane protein | - |
| K5619_RS10305 () | 2103072..2103722 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| K5619_RS10310 () | 2103741..2103932 | - | 192 | WP_000457836.1 | YebW family protein | - |
| K5619_RS10315 () | 2104043..2104279 | - | 237 | WP_024131108.1 | YebV family protein | - |
| K5619_RS10320 () | 2104397..2105836 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K5619_RS10325 () | 2105914..2108547 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| K5619_RS10330 () | 2108516..2109799 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| K5619_RS10335 () | 2109928..2110425 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| K5619_RS10340 () | 2110523..2111209 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| K5619_RS10345 () | 2111229..2113277 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.006 |