MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023317 Location: 1028617..1039043 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4681 Replicon: chromosome
Accession: NZ_AP023317 Location: 1028617..1039043 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4681 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5693_RS04930 (1023730) | 1023730..1024110 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5693_RS04935 (1024166) | 1024166..1026733 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5693_RS04940 (1026892) | 1026892..1027413 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5693_RS04945 (1027585) | 1027585..1028241 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5693_RS04950 (1028588) | 1028588..1028793 | + | 206 | Protein_972 | IS5 family transposase ISEcl3 | Transposase |
| K5693_RS04955 (1028866) | 1028866..1029393 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5693_RS04960 (1029390) | 1029390..1029680 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5693_RS04965 (1029950) | 1029950..1030128 | - | 179 | Protein_975 | IS3 family transposase | - |
| K5693_RS04970 (1030369) | 1030369..1030695 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5693_RS04975 (1030968) | 1030968..1031315 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5693_RS04980 (1031300) | 1031300..1031749 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5693_RS04985 (1032180) | 1032180..1032623 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| K5693_RS04990 (1033080) | 1033080..1033730 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| K5693_RS04995 (1033727) | 1033727..1035415 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| K5693_RS05000 (1035412) | 1035412..1036530 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| K5693_RS05005 (1036555) | 1036555..1038612 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| K5693_RS05010 (1038636) | 1038636..1039043 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| K5693_RS05015 (1039040) | 1039040..1040335 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5693_RS05020 (1040313) | 1040313..1040756 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5693_RS05025 (1040756) | 1040756..1041766 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5693_RS05030 (1041766) | 1041766..1042677 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5693_RS05035 (1042667) | 1042667..1043341 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5693_RS05040 (1043367) | 1043367..1043627 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |