MGE detailed information
MGE type: Conjugative plasmid MGE length: 99131 bp
Accession: NZ_AP023314 Location: 1..99131 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4605 Replicon: plasmid L-4605 strain 4[5]12:i:-
Accession: NZ_AP023314 Location: 1..99131 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4605 Replicon: plasmid L-4605 strain 4[5]12:i:-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5670_RS23830 () | 101..358 | + | 258 | WP_001541895.1 | replication regulatory protein RepA | - |
| K5670_RS23835 () | 590..664 | + | 75 | WP_061357229.1 | RepA leader peptide Tap | - |
| K5670_RS23840 () | 657..1514 | + | 858 | WP_039002220.1 | incFII family plasmid replication initiator RepA | - |
| K5670_RS23845 () | 2480..2731 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K5670_RS23850 () | 2728..3015 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K5670_RS23855 () | 3090..3278 | - | 189 | Protein_5 | IS3 family transposase | - |
| K5670_RS23860 () | 3312..3812 | - | 501 | Protein_6 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| K5670_RS23865 () | 3846..4892 | - | 1047 | Protein_7 | Tn3 family transposase TnpA_Tn3 | Transposase |
| K5670_RS24605 () | 4926..5006 | - | 81 | Protein_8 | MerR family transcriptional regulator | - |
| K5670_RS23870 () | 5067..5771 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| K5670_RS23875 () | 5965..6351 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| K5670_RS23880 () | 6671..6892 | - | 222 | WP_226909166.1 | hypothetical protein | - |
| K5670_RS23885 () | 6876..7697 | - | 822 | WP_039026397.1 | IS3 family transposase ISKpn40 | Transposase |
| K5670_RS23890 () | 7694..8008 | - | 315 | WP_039026396.1 | IS3 family transposase ISKpn40 | Transposase |
| K5670_RS23895 () | 8203..8583 | - | 381 | WP_039026395.1 | diacylglycerol kinase | - |
| K5670_RS23900 () | 8701..10326 | - | 1626 | WP_039026394.1 | Phosphoethanolamine transferase EptA | VF |
| K5670_RS23905 () | 10500..11354 | + | 855 | Protein_16 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| K5670_RS23910 () | 11389..11763 | + | 375 | Protein_17 | IS6 family transposase IS26 | Transposase |
| K5670_RS23915 () | 11906..12448 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| K5670_RS23920 () | 12461..13321 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| K5670_RS23925 () | 13464..13799 | + | 336 | Protein_20 | IS4 family transposase | - |
| K5670_RS23930 () | 13848..14552 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| K5670_RS23935 () | 14811..15368 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| K5670_RS23940 () | 15551..16411 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| K5670_RS23945 () | 16669..17460 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| K5670_RS23950 () | 17929..18174 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| K5670_RS23955 () | 18212..19075 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| K5670_RS23960 () | 19221..19472 | - | 252 | Protein_27 | hypothetical protein | - |
| K5670_RS23965 () | 19524..20228 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K5670_RS23970 () | 20291..20701 | + | 411 | Protein_29 | IS3 family transposase ISEhe3 | Transposase |
| K5670_RS23975 () | 20788..20983 | + | 196 | Protein_30 | serine/threonine protein kinase | - |
| K5670_RS23980 () | 21104..21844 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| K5670_RS23985 () | 22129..23106 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| K5670_RS23990 () | 23862..24834 | + | 973 | Protein_33 | hypothetical protein | - |
| K5670_RS24610 () | 24993..25151 | - | 159 | WP_228955855.1 | abortive infection family protein | - |
| K5670_RS24000 () | 25299..25996 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| K5670_RS24005 () | 26133..27026 | - | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| K5670_RS24010 () | 27069..28064 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| K5670_RS24015 () | 28529..30667 | + | 2139 | WP_039002805.1 | AAA family ATPase | - |
| K5670_RS24020 () | 30829..31245 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K5670_RS24025 () | 31242..31472 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K5670_RS24615 () | 31778..32326 | + | 549 | WP_039002808.1 | hypothetical protein | - |
| K5670_RS24620 () | 32378..33208 | + | 831 | WP_223201786.1 | hypothetical protein | - |
| K5670_RS24625 () | 33259..34896 | + | 1638 | WP_223201785.1 | hypothetical protein | - |
| K5670_RS24035 () | 35159..36292 | + | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| K5670_RS24040 () | 36312..36596 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| K5670_RS24045 () | 37021..37170 | - | 150 | Protein_46 | IS30 family transposase | - |
| K5670_RS24050 () | 37249..38462 | + | 1214 | WP_162841971.1 | IS3 family transposase IS629 | Transposase |
| K5670_RS24055 () | 38505..39323 | - | 819 | Protein_48 | IS30 family transposase IS30D | Transposase |
| K5670_RS24060 () | 39391..40284 | + | 894 | Protein_49 | IS3 family transposase ISEhe3 | Transposase |
| K5670_RS24065 () | 40386..40667 | + | 282 | WP_000639434.1 | hypothetical protein | - |
| K5670_RS24075 () | 41575..42900 | + | 1326 | WP_021512928.1 | reactive chlorine resistance oxidoreductase RclA | - |
| K5670_RS24080 () | 43049..43753 | - | 705 | WP_065304467.1 | IS6 family transposase IS26 | Transposase |
| K5670_RS24085 () | 43744..44250 | + | 507 | WP_001505085.1 | hypothetical protein | - |
| K5670_RS24090 () | 44247..45023 | + | 777 | Protein_55 | site-specific integrase | - |
| K5670_RS24095 () | 45175..45450 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| K5670_RS24100 () | 45444..46088 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| K5670_RS24105 () | 46310..47281 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| K5670_RS24110 () | 47286..47678 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| K5670_RS24115 () | 47683..48954 | - | 1272 | WP_000457518.1 | Y-family DNA polymerase | - |
| K5670_RS24120 () | 48954..49391 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K5670_RS24125 () | 49388..49636 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| K5670_RS24130 () | 50054..50956 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| K5670_RS24135 () | 50953..51264 | + | 312 | WP_011254640.1 | hypothetical protein | - |
| K5670_RS24140 () | 51341..52024 | + | 684 | WP_000086185.1 | DNA methylase | - |
| K5670_RS24145 () | 52025..52246 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| K5670_RS24150 () | 52176..52694 | + | 519 | WP_123325260.1 | DUF1380 family protein | - |
| K5670_RS24155 () | 52745..53521 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| K5670_RS24160 () | 53938..54363 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| K5670_RS24165 () | 54410..54832 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| K5670_RS24170 () | 54829..55020 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| K5670_RS24175 () | 56055..56285 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| K5670_RS24180 () | 56337..57698 | + | 1362 | WP_038999961.1 | DUF3560 domain-containing protein | - |
| K5670_RS24185 () | 57746..58309 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| K5670_RS24630 () | 58461..58688 | + | 228 | WP_071961421.1 | hypothetical protein | - |
| K5670_RS24190 () | 58929..59135 | + | 207 | WP_000275853.1 | hypothetical protein | - |
| K5670_RS24195 () | 59161..59700 | + | 540 | WP_032332913.1 | single-stranded DNA-binding protein | - |
| K5670_RS24200 () | 59757..59990 | + | 234 | WP_000005987.1 | DUF905 family protein | - |
| K5670_RS24205 () | 60055..62013 | + | 1959 | WP_039000998.1 | ParB/RepB/Spo0J family partition protein | - |
| K5670_RS24210 () | 62068..62502 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| K5670_RS24215 () | 62499..63218 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| - () | 63230..63454 | + | 225 | NuclAT_0 | - | - |
| - () | 63230..63454 | + | 225 | NuclAT_0 | - | - |
| - () | 63230..63454 | + | 225 | NuclAT_0 | - | - |
| - () | 63230..63454 | + | 225 | NuclAT_0 | - | - |
| - | 63387..63452 | + | 66 | - | - | Antitoxin Detail |
| K5670_RS24635 () | 63440..63589 | + | 150 | Protein_82 | plasmid maintenance protein Mok | - |
| K5670_RS24220 () | 63531..63656 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| K5670_RS24640 () | 63876..64106 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| K5670_RS24645 () | 64104..64277 | - | 174 | Protein_85 | hypothetical protein | - |
| K5670_RS24650 () | 64347..64553 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| K5670_RS24225 () | 64578..64865 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| K5670_RS24230 () | 64987..65808 | + | 822 | WP_072795862.1 | DUF932 domain-containing protein | - |
| K5670_RS24235 () | 66105..66707 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| K5670_RS24240 () | 67028..67411 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K5670_RS24245 () | 67598..68287 | + | 690 | WP_039002187.1 | conjugal transfer transcriptional regulator TraJ | - |
| K5670_RS24250 () | 68380..68781 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| K5670_RS24255 () | 68814..69176 | + | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| K5670_RS24260 () | 69181..69492 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| K5670_RS24265 () | 69514..70080 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| K5670_RS24270 () | 70067..70795 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| K5670_RS24275 () | 70795..72222 | + | 1428 | WP_000146690.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K5670_RS24280 () | 72212..72799 | + | 588 | WP_000002772.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K5670_RS24285 () | 72786..73106 | + | 321 | WP_063078087.1 | conjugal transfer protein TrbD | - |
| K5670_RS24290 () | 73103..73618 | + | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| K5670_RS24295 () | 73753..73974 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| K5670_RS24300 () | 74134..76761 | + | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| K5670_RS24305 () | 76758..77144 | + | 387 | WP_039002198.1 | type-F conjugative transfer system protein TrbI | - |
| K5670_RS24310 () | 77141..77773 | + | 633 | WP_001749440.1 | type-F conjugative transfer system protein TraW | - |
| K5670_RS24315 () | 77770..78762 | + | 993 | WP_023148235.1 | conjugal transfer pilus assembly protein TraU | - |
| K5670_RS24320 () | 78771..79409 | + | 639 | WP_000777691.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| K5670_RS24325 () | 79406..81214 | + | 1809 | WP_000821844.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| K5670_RS24330 () | 81241..81501 | + | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| K5670_RS24335 () | 81494..82237 | + | 744 | WP_039002205.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K5670_RS24340 () | 82353..82634 | + | 282 | WP_039002206.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| K5670_RS24345 () | 82621..83166 | + | 546 | WP_000052613.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| K5670_RS24350 () | 83096..83458 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| K5670_RS24355 () | 83455..84831 | + | 1377 | WP_000982842.1 | conjugal transfer pilus assembly protein TraH | - |
| K5670_RS24360 () | 84828..87650 | + | 2823 | WP_001007048.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| K5670_RS24365 () | 87665..88168 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| K5670_RS24370 () | 88200..88931 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| K5670_RS24375 () | 89184..91373 | + | 2190 | WP_039002212.1 | type IV conjugative transfer system coupling protein TraD | - |
| K5670_RS24380 () | 91373..96643 | + | 5271 | WP_054377139.1 | Multifunctional conjugation protein TraI | Relaxase |
| K5670_RS24385 () | 96663..97406 | + | 744 | WP_039002216.1 | conjugal transfer pilus acetylase TraX | - |
| K5670_RS24390 () | 97461..98021 | + | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| K5670_RS24395 () | 98156..98368 | + | 213 | WP_001541896.1 | ANR family transcriptional regulator | - |
| - () | 98710..98771 | - | 62 | NuclAT_1 | - | - |
| - () | 98710..98771 | - | 62 | NuclAT_1 | - | - |
| - () | 98710..98771 | - | 62 | NuclAT_1 | - | - |
| - () | 98710..98771 | - | 62 | NuclAT_1 | - | - |
| K5670_RS24400 () | 98815..98964 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|