MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_AP023313 Location: 3665651..3679624 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4605 Replicon: chromosome
Accession: NZ_AP023313 Location: 3665651..3679624 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4605 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5670_RS18000 () | 3661222..3663666 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| K5670_RS18005 () | 3663775..3664542 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| K5670_RS18010 () | 3664913..3665320 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| K5670_RS18015 () | 3665651..3666370 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| K5670_RS18020 () | 3666374..3666589 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| K5670_RS18025 () | 3666706..3667653 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| K5670_RS18030 () | 3668145..3668385 | - | 241 | Protein_3545 | PerC family transcriptional regulator | - |
| K5670_RS18035 () | 3668468..3669289 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| K5670_RS18040 () | 3669695..3670165 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| K5670_RS18045 () | 3670187..3672697 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| K5670_RS18050 () | 3672721..3673458 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| K5670_RS18055 () | 3673542..3674054 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| K5670_RS18060 () | 3674804..3675508 | - | 705 | Protein_3551 | integrase core domain-containing protein | - |
| K5670_RS18065 () | 3675561..3675809 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| K5670_RS18070 () | 3675911..3676219 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| K5670_RS18075 () | 3676302..3676475 | - | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| - | 3676503..3676925 | - | 423 | - | - | Antitoxin Detail |
| K5670_RS18080 () | 3676660..3676935 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| K5670_RS18085 () | 3676988..3677425 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| K5670_RS18090 () | 3677988..3678434 | - | 447 | WP_000935097.1 | protein SciX | - |
| K5670_RS18095 () | 3678428..3679297 | - | 870 | Protein_3558 | Protein RhsC | VF |
| K5670_RS18100 () | 3679361..3679624 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| K5670_RS18105 () | 3679618..3683712 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| K5670_RS18110 () | 3683731..3684177 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |