MGE detailed information
MGE type: Prophage MGE length: 21300 bp
Accession: NZ_AP023311 Location: 2084392..2105691 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4596 Replicon: chromosome
Accession: NZ_AP023311 Location: 2084392..2105691 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4596 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5674_RS10145 () | 2080629..2080919 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K5674_RS10150 () | 2080987..2081340 | + | 354 | WP_001042119.1 | protein YebF | - |
| K5674_RS10155 () | 2081434..2082093 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| K5674_RS10160 () | 2082306..2084357 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| K5674_RS10165 () | 2084392..2085090 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| K5674_RS10170 () | 2085114..2085770 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| K5674_RS10175 () | 2085878..2086108 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K5674_RS10180 () | 2086246..2086620 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K5674_RS10185 () | 2086621..2087496 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| K5674_RS10190 () | 2087513..2087866 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2087966..2088111 | - | 146 | - | - | Antitoxin Detail |
| - | 2088006..2088109 | + | 104 | - | - | Toxin Detail |
| K5674_RS10195 () | 2088240..2089163 | - | 924 | Protein_2003 | Thiamine-monophosphate kinase ; Integrase | Integrase |
| K5674_RS25215 () | 2089427..2089888 | - | 462 | Protein_2004 | DNA breaking-rejoining protein | - |
| K5674_RS10205 () | 2089877..2090068 | + | 192 | Protein_2005 | glycoside hydrolase family 19 protein | - |
| K5674_RS10210 () | 2090122..2090655 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| K5674_RS10215 () | 2090912..2091079 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| K5674_RS10220 () | 2091144..2091332 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| K5674_RS10225 () | 2091387..2091647 | + | 261 | Protein_2009 | DUF1441 family protein | - |
| K5674_RS10230 () | 2091862..2092206 | + | 345 | Protein_2010 | macro domain-containing protein | - |
| K5674_RS10235 () | 2092216..2092686 | + | 471 | Protein_2011 | tail fiber assembly protein | - |
| K5674_RS10240 () | 2092783..2092983 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| K5674_RS25220 () | 2093373..2093553 | - | 181 | Protein_2013 | IS3 family transposase | - |
| K5674_RS10245 () | 2093544..2093645 | + | 102 | Protein_2014 | arsenic transporter | - |
| K5674_RS25225 () | 2094267..2094499 | + | 233 | Protein_2015 | helix-turn-helix domain-containing protein | - |
| K5674_RS10260 () | 2094826..2095440 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| K5674_RS10265 () | 2095450..2095608 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K5674_RS10270 () | 2095741..2096655 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| K5674_RS10275 () | 2097968..2098390 | - | 423 | Protein_2019 | endonuclease 4 ; Integrase | Integrase |
| K5674_RS10280 () | 2098460..2099654 | + | 1195 | Protein_2020 | IS256 family transposase IS285 | Transposase |
| K5674_RS10285 () | 2099800..2099940 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| K5674_RS10290 () | 2100106..2100375 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| K5674_RS10295 () | 2100745..2101164 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| K5674_RS10300 () | 2101552..2102028 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| K5674_RS10305 () | 2102358..2102753 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| K5674_RS10310 () | 2103436..2104158 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| K5674_RS10315 () | 2104443..2104607 | + | 165 | WP_001134856.1 | membrane protein | - |
| K5674_RS10320 () | 2104831..2105481 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| K5674_RS10325 () | 2105500..2105691 | - | 192 | WP_000457836.1 | YebW family protein | - |
| K5674_RS10330 () | 2105802..2106038 | - | 237 | WP_024131108.1 | YebV family protein | - |
| K5674_RS10335 () | 2106156..2107595 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K5674_RS10340 () | 2107673..2110306 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.009 |