MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023309 Location: 995888..1006314 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578 Replicon: chromosome
Accession: NZ_AP023309 Location: 995888..1006314 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5680_RS04725 (991001) | 991001..991381 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5680_RS04730 (991437) | 991437..994004 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5680_RS04735 (994163) | 994163..994684 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5680_RS04740 (994856) | 994856..995512 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5680_RS04745 (995859) | 995859..996064 | + | 206 | Protein_932 | IS5 family transposase ISEcl3 | Transposase |
| K5680_RS04750 (996137) | 996137..996664 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5680_RS04755 (996661) | 996661..996951 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5680_RS04760 (997221) | 997221..997399 | - | 179 | Protein_935 | IS3 family transposase | - |
| K5680_RS04765 (997640) | 997640..997966 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5680_RS04770 (998239) | 998239..998586 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5680_RS04775 (998571) | 998571..999020 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5680_RS04780 (999451) | 999451..999894 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| K5680_RS04785 (1000351) | 1000351..1001001 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| K5680_RS04790 (1000998) | 1000998..1002686 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| K5680_RS04795 (1002683) | 1002683..1003801 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| K5680_RS04800 (1003826) | 1003826..1005883 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| K5680_RS04805 (1005907) | 1005907..1006314 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| K5680_RS04810 (1006311) | 1006311..1007606 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5680_RS04815 (1007584) | 1007584..1008027 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5680_RS04820 (1008027) | 1008027..1009037 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5680_RS04825 (1009037) | 1009037..1009948 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5680_RS04830 (1009938) | 1009938..1010612 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5680_RS04835 (1010638) | 1010638..1010898 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |