MGE detailed information
MGE type: Prophage MGE length: 42338 bp
Accession: NZ_AP023304 Location: 2106149..2148486 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4551 Replicon: chromosome
Accession: NZ_AP023304 Location: 2106149..2148486 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4551 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5676_RS10255 () | 2102342..2103238 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| K5676_RS10260 () | 2103658..2104269 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| K5676_RS10265 () | 2104278..2105288 | + | 1011 | WP_000568508.1 | Holliday junction branch migration DNA helicase RuvB | - |
| K5676_RS10270 () | 2105367..2106152 | - | 786 | WP_000571508.1 | zinc ABC transporter permease subunit ZnuB | - |
| K5676_RS10275 () | 2106149..2106904 | - | 756 | WP_000203014.1 | Zinc import ATP-binding protein ZnuC | VF |
| K5676_RS10280 () | 2106983..2107927 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| K5676_RS10285 () | 2107943..2109262 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| K5676_RS10290 () | 2109379..2110350 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| K5676_RS10295 () | 2110423..2111865 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| K5676_RS10300 () | 2111989..2112858 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| K5676_RS10305 () | 2113200..2114675 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| K5676_RS10310 () | 2114910..2116721 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| K5676_RS10315 () | 2116759..2117400 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| K5676_RS10320 () | 2117500..2118678 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K5676_RS10325 () | 2118809..2119099 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K5676_RS10330 () | 2119167..2119520 | + | 354 | WP_001042119.1 | protein YebF | - |
| K5676_RS10335 () | 2119614..2120273 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| K5676_RS10340 () | 2120486..2122537 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| K5676_RS10345 () | 2122572..2123270 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| K5676_RS10350 () | 2123294..2123950 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| K5676_RS10355 () | 2124058..2124288 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K5676_RS10360 () | 2124426..2124800 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K5676_RS10365 () | 2124801..2125676 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| K5676_RS10370 () | 2125693..2126046 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2126146..2126291 | - | 146 | - | - | Antitoxin Detail |
| - | 2126186..2126289 | + | 104 | - | - | Toxin Detail |
| K5676_RS10375 () | 2126420..2127343 | - | 924 | Protein_2038 | hypothetical protein ; Integrase | Integrase |
| K5676_RS25025 () | 2127607..2128068 | - | 462 | Protein_2039 | DNA breaking-rejoining protein | - |
| K5676_RS10385 () | 2128057..2128248 | + | 192 | Protein_2040 | glycoside hydrolase family 19 protein | - |
| K5676_RS10390 () | 2128302..2128835 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| K5676_RS10395 () | 2129092..2129259 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| K5676_RS10400 () | 2129324..2129512 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| K5676_RS10405 () | 2129567..2129827 | + | 261 | Protein_2044 | DUF1441 family protein | - |
| K5676_RS10410 () | 2130042..2130386 | + | 345 | Protein_2045 | macro domain-containing protein | - |
| K5676_RS10415 () | 2130396..2130866 | + | 471 | Protein_2046 | tail fiber assembly protein | - |
| K5676_RS10420 () | 2130963..2131163 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| K5676_RS25030 () | 2131553..2131733 | - | 181 | Protein_2048 | IS3 family transposase | - |
| K5676_RS10425 () | 2131724..2131825 | + | 102 | Protein_2049 | arsenic transporter | - |
| K5676_RS25035 () | 2132447..2132679 | + | 233 | Protein_2050 | helix-turn-helix domain-containing protein | - |
| K5676_RS10440 () | 2133006..2133620 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| K5676_RS10445 () | 2133630..2133788 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K5676_RS10450 () | 2133921..2134835 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| K5676_RS10455 () | 2136148..2136570 | - | 423 | Protein_2054 | hypothetical protein ; Integrase | Integrase |
| K5676_RS10460 () | 2136640..2137834 | + | 1195 | Protein_2055 | IS256 family transposase IS285 | Transposase |
| K5676_RS10465 () | 2137980..2138120 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| K5676_RS10470 () | 2138286..2138555 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| K5676_RS10475 () | 2138925..2139344 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| K5676_RS10480 () | 2139732..2140208 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| K5676_RS10485 () | 2140538..2140933 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| K5676_RS10490 () | 2141616..2142338 | + | 723 | WP_125670228.1 | Guanine nucleotide exchange factor sopE2 | VF |
| K5676_RS10495 () | 2142623..2142787 | + | 165 | WP_001134856.1 | membrane protein | - |
| K5676_RS10500 () | 2143011..2143661 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| K5676_RS10505 () | 2143680..2143871 | - | 192 | WP_000457836.1 | YebW family protein | - |
| K5676_RS10510 () | 2143982..2144218 | - | 237 | WP_024131108.1 | YebV family protein | - |
| K5676_RS10515 () | 2144336..2145775 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K5676_RS10520 () | 2145853..2148486 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| K5676_RS10525 () | 2148455..2149738 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| K5676_RS10530 () | 2149867..2150364 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| K5676_RS10535 () | 2150462..2151148 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| K5676_RS10540 () | 2151168..2153216 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25947 | NC_016810 | 1910986..1947632 | 0.006 |