MGE detailed information
MGE type: Genomic_island MGE length: 11650 bp
Accession: NZ_AP023299 Location: 3675934..3687583 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4334 Replicon: chromosome
Accession: NZ_AP023299 Location: 3675934..3687583 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4334 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K5616_RS18055 () | 3671734..3672501 | + | 768 | WP_000015789.1 | amidohydrolase | - |
K5616_RS18060 () | 3672872..3673279 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
K5616_RS18065 () | 3673610..3674329 | + | 720 | WP_022630913.1 | adhesin/invasin protein PagN | - |
K5616_RS18070 () | 3674333..3674548 | - | 216 | WP_001575654.1 | hypothetical protein | - |
K5616_RS18075 () | 3674665..3675612 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
K5616_RS18080 () | 3676104..3676344 | - | 241 | Protein_3554 | PerC family transcriptional regulator | - |
K5616_RS18085 () | 3676427..3677248 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
K5616_RS18090 () | 3677654..3678124 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
K5616_RS18095 () | 3678146..3680656 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
K5616_RS18100 () | 3680680..3681417 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
K5616_RS18105 () | 3681501..3682013 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
K5616_RS18110 () | 3682763..3683467 | - | 705 | Protein_3560 | integrase core domain-containing protein | - |
K5616_RS18115 () | 3683520..3683768 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
K5616_RS18120 () | 3683870..3684178 | - | 309 | WP_010988969.1 | hypothetical protein | - |
K5616_RS18125 () | 3684261..3684434 | - | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
- | 3684462..3684884 | - | 423 | - | - | Antitoxin Detail |
K5616_RS18130 () | 3684619..3684894 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
K5616_RS18135 () | 3684947..3685384 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
K5616_RS18140 () | 3685947..3686393 | - | 447 | WP_000935097.1 | protein SciX | - |
K5616_RS18145 () | 3686387..3687256 | - | 870 | Protein_3567 | Protein RhsC | VF |
K5616_RS18150 () | 3687320..3687583 | - | 264 | WP_000932531.1 | hypothetical protein | - |
K5616_RS18155 () | 3687577..3691671 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
K5616_RS18160 () | 3691690..3692136 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.006 | |
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.006 |