MGE detailed information
MGE type: Prophage MGE length: 24048 bp
Accession: NZ_AP023299 Location: 2080618..2104665 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4334 Replicon: chromosome
Accession: NZ_AP023299 Location: 2080618..2104665 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4334 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5616_RS10120 () | 2075914..2077725 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| K5616_RS10125 () | 2077763..2078404 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| K5616_RS10130 () | 2078504..2079682 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K5616_RS10135 () | 2079813..2080103 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K5616_RS10140 () | 2080171..2080524 | + | 354 | WP_001042119.1 | protein YebF | - |
| K5616_RS10145 () | 2080618..2081277 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| K5616_RS10150 () | 2081490..2083541 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| K5616_RS10155 () | 2083576..2084274 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| K5616_RS10160 () | 2084298..2084954 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| K5616_RS10165 () | 2085062..2085292 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K5616_RS10170 () | 2085430..2085804 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K5616_RS10175 () | 2085805..2086680 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| K5616_RS10180 () | 2086697..2087050 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2087150..2087295 | - | 146 | - | - | Antitoxin Detail |
| - | 2087190..2087293 | + | 104 | - | - | Toxin Detail |
| K5616_RS10185 () | 2087424..2088347 | - | 924 | Protein_2000 | Trehalose-6-phosphate phosphatase ; Integrase | Integrase |
| K5616_RS23960 () | 2088611..2089072 | - | 462 | Protein_2001 | DNA breaking-rejoining protein | - |
| K5616_RS10195 () | 2089061..2089252 | + | 192 | Protein_2002 | glycoside hydrolase family 19 protein | - |
| K5616_RS10200 () | 2089306..2089839 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| K5616_RS10205 () | 2090096..2090263 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| K5616_RS10210 () | 2090328..2090516 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| K5616_RS10215 () | 2090571..2090831 | + | 261 | Protein_2006 | DUF1441 family protein | - |
| K5616_RS10220 () | 2091046..2091390 | + | 345 | Protein_2007 | macro domain-containing protein | - |
| K5616_RS10225 () | 2091400..2091870 | + | 471 | Protein_2008 | tail fiber assembly protein | - |
| K5616_RS10230 () | 2091967..2092167 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| K5616_RS23965 () | 2092557..2092737 | - | 181 | Protein_2010 | IS3 family transposase | - |
| K5616_RS10235 () | 2092728..2092829 | + | 102 | Protein_2011 | arsenic transporter | - |
| K5616_RS23970 () | 2093451..2093683 | + | 233 | Protein_2012 | helix-turn-helix domain-containing protein | - |
| K5616_RS10250 () | 2094010..2094624 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| K5616_RS10255 () | 2094634..2094792 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K5616_RS10260 () | 2094925..2095839 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| K5616_RS10265 () | 2097152..2097574 | - | 423 | Protein_2016 | Chemotaxis protein methyltransferase ; Integrase | Integrase |
| K5616_RS10270 () | 2097644..2098838 | + | 1195 | Protein_2017 | IS256 family transposase IS285 | Transposase |
| K5616_RS10275 () | 2098984..2099124 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| K5616_RS10280 () | 2099290..2099559 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| K5616_RS10285 () | 2099929..2100348 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| K5616_RS10290 () | 2100736..2101212 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| K5616_RS10295 () | 2101542..2101937 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| K5616_RS10300 () | 2102620..2103342 | + | 723 | WP_000182072.1 | Flagellar protein FlhE | VF |
| K5616_RS10305 () | 2103627..2103791 | + | 165 | WP_001134856.1 | membrane protein | - |
| K5616_RS10310 () | 2104015..2104665 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| K5616_RS10315 () | 2104684..2104875 | - | 192 | WP_000457836.1 | YebW family protein | - |
| K5616_RS10320 () | 2104986..2105222 | - | 237 | WP_024131108.1 | YebV family protein | - |
| K5616_RS10325 () | 2105340..2106779 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K5616_RS10330 () | 2106857..2109490 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.008 |