MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023294 Location: 995814..1006240 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4261 Replicon: chromosome
Accession: NZ_AP023294 Location: 995814..1006240 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4261 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5635_RS04720 (990927) | 990927..991307 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5635_RS04725 (991363) | 991363..993930 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5635_RS04730 (994089) | 994089..994610 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5635_RS04735 (994782) | 994782..995438 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5635_RS04740 (995785) | 995785..995990 | + | 206 | Protein_931 | IS5 family transposase ISEcl3 | Transposase |
| K5635_RS04745 (996063) | 996063..996590 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5635_RS04750 (996587) | 996587..996877 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5635_RS04755 (997147) | 997147..997325 | - | 179 | Protein_934 | IS3 family transposase | - |
| K5635_RS04760 (997566) | 997566..997892 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5635_RS04765 (998165) | 998165..998512 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5635_RS04770 (998497) | 998497..998946 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5635_RS04775 (999377) | 999377..999820 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| K5635_RS04780 (1000277) | 1000277..1000927 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| K5635_RS04785 (1000924) | 1000924..1002612 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| K5635_RS04790 (1002609) | 1002609..1003727 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| K5635_RS04795 (1003752) | 1003752..1005809 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| K5635_RS04800 (1005833) | 1005833..1006240 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| K5635_RS04805 (1006237) | 1006237..1007532 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5635_RS04810 (1007510) | 1007510..1007953 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5635_RS04815 (1007953) | 1007953..1008963 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5635_RS04820 (1008963) | 1008963..1009874 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5635_RS04825 (1009864) | 1009864..1010538 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5635_RS04830 (1010564) | 1010564..1010824 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |