MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_AP023289 Location: 2545459..2557544 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3837 Replicon: chromosome
Accession: NZ_AP023289 Location: 2545459..2557544 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3837 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5612_RS12495 (2541380) | 2541380..2542582 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| K5612_RS12500 (2542595) | 2542595..2544046 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| K5612_RS12505 (2544190) | 2544190..2545197 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| K5612_RS12510 (2545456) | 2545456..2546922 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| K5612_RS12515 (2547730) | 2547730..2548444 | + | 715 | Protein_2463 | helix-turn-helix domain-containing protein | - |
| K5612_RS12520 (2548500) | 2548500..2549408 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| K5612_RS12525 (2549551) | 2549551..2549883 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| K5612_RS12530 (2549873) | 2549873..2550088 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| K5612_RS12535 (2550240) | 2550240..2550488 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K5612_RS12540 (2550478) | 2550478..2550762 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K5612_RS12545 (2550933) | 2550933..2551322 | + | 390 | WP_000194089.1 | RidA family protein | - |
| K5612_RS12550 (2551374) | 2551374..2552453 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| K5612_RS12555 (2552646) | 2552646..2553134 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| K5612_RS12560 (2553179) | 2553179..2554687 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| K5612_RS12565 (2554677) | 2554677..2555918 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| K5612_RS12570 (2555988) | 2555988..2557544 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| K5612_RS12575 (2557721) | 2557721..2559007 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| K5612_RS12580 (2558982) | 2558982..2560007 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| K5612_RS12585 (2560066) | 2560066..2560857 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| K5612_RS12590 (2560903) | 2560903..2561994 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |