MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023289 Location: 1108472..1118898 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3837 Replicon: chromosome
Accession: NZ_AP023289 Location: 1108472..1118898 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3837 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5612_RS05350 (1103585) | 1103585..1103965 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5612_RS05355 (1104021) | 1104021..1106588 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5612_RS05360 (1106747) | 1106747..1107268 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5612_RS05365 (1107440) | 1107440..1108096 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5612_RS05370 (1108443) | 1108443..1108648 | + | 206 | Protein_1057 | IS5 family transposase ISEcl3 | Transposase |
| K5612_RS05375 (1108721) | 1108721..1109248 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5612_RS05380 (1109245) | 1109245..1109535 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5612_RS05385 (1109805) | 1109805..1109983 | - | 179 | Protein_1060 | IS3 family transposase | - |
| K5612_RS05390 (1110224) | 1110224..1110550 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5612_RS05395 (1110823) | 1110823..1111170 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5612_RS05400 (1111155) | 1111155..1111604 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5612_RS05405 (1112035) | 1112035..1112478 | - | 444 | WP_000715092.1 | Bifunctional autolysin | VF |
| K5612_RS05410 (1112935) | 1112935..1113585 | + | 651 | WP_001674874.1 | Acetyltransferase | VF |
| K5612_RS05415 (1113582) | 1113582..1115270 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| K5612_RS05420 (1115267) | 1115267..1116385 | + | 1119 | WP_000612171.1 | Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagT | VF |
| K5612_RS05425 (1116410) | 1116410..1118467 | + | 2058 | WP_000927219.1 | Protein FmtA | VF |
| K5612_RS05430 (1118491) | 1118491..1118898 | + | 408 | WP_001164066.1 | Quinol oxidase subunit 4 | VF |
| K5612_RS05435 (1118895) | 1118895..1120190 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5612_RS05440 (1120168) | 1120168..1120611 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5612_RS05445 (1120611) | 1120611..1121621 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5612_RS05450 (1121621) | 1121621..1122532 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5612_RS05455 (1122522) | 1122522..1123196 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5612_RS05460 (1123222) | 1123222..1123482 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |