MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023288 Location: 1045315..1055741 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3835 Replicon: chromosome
Accession: NZ_AP023288 Location: 1045315..1055741 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3835 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5610_RS05045 (1040428) | 1040428..1040808 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5610_RS05050 (1040864) | 1040864..1043431 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5610_RS05055 (1043590) | 1043590..1044111 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5610_RS05060 (1044283) | 1044283..1044939 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5610_RS05065 (1045286) | 1045286..1045491 | + | 206 | Protein_995 | IS5 family transposase ISEcl3 | Transposase |
| K5610_RS05070 (1045564) | 1045564..1046091 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5610_RS05075 (1046088) | 1046088..1046378 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5610_RS05080 (1046648) | 1046648..1046826 | - | 179 | Protein_998 | IS3 family transposase | - |
| K5610_RS05085 (1047067) | 1047067..1047393 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5610_RS05090 (1047666) | 1047666..1048013 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5610_RS05095 (1047998) | 1047998..1048447 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5610_RS05100 (1048878) | 1048878..1049321 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| K5610_RS05105 (1049778) | 1049778..1050428 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| K5610_RS05110 (1050425) | 1050425..1052113 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| K5610_RS05115 (1052110) | 1052110..1053228 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| K5610_RS05120 (1053253) | 1053253..1055310 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| K5610_RS05125 (1055334) | 1055334..1055741 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| K5610_RS05130 (1055738) | 1055738..1057033 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5610_RS05135 (1057011) | 1057011..1057454 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5610_RS05140 (1057454) | 1057454..1058464 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5610_RS05145 (1058464) | 1058464..1059375 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5610_RS05150 (1059365) | 1059365..1060039 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5610_RS05155 (1060065) | 1060065..1060325 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |