MGE detailed information
MGE type: Conjugative plasmid MGE length: 114953 bp
Accession: NZ_AP022816 Location: 1..114953 Organism: Escherichia coli strain JE86-ST05 Replicon: plasmid JE86-ST05_p1
Accession: NZ_AP022816 Location: 1..114953 Organism: Escherichia coli strain JE86-ST05 Replicon: plasmid JE86-ST05_p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL003_RS26220 () | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| JL003_RS26225 () | 1257..1996 | - | 740 | Protein_1 | site-specific integrase | - |
| JL003_RS26230 () | 2117..2248 | - | 132 | WP_170989453.1 | transcriptional regulator | - |
| JL003_RS26235 () | 2709..2891 | - | 183 | Protein_3 | IS1 family transposase | - |
| JL003_RS26240 () | 3444..4457 | + | 1014 | Protein_4 | IS481 family transposase | - |
| JL003_RS26245 () | 4814..6022 | - | 1209 | WP_011666436.1 | AatD, apolipoprotein N-acyltransferase | - |
| JL003_RS26250 () | 6034..6663 | - | 630 | WP_011666435.1 | dispersin export ABC transporter ATP-binding protein AatC | - |
| JL003_RS26255 () | 6656..7477 | - | 822 | WP_011666434.1 | dispersin export-associated protein AatB | - |
| JL003_RS26260 () | 7374..8612 | - | 1239 | WP_011666433.1 | dispersin export ABC transporter outer membrane protein AatA | - |
| JL003_RS26265 () | 8609..9739 | - | 1131 | WP_032178543.1 | dispersin export ABC transporter permease subunit AatP | - |
| JL003_RS26270 () | 9905..10173 | - | 269 | Protein_10 | transposase | - |
| JL003_RS26275 () | 10255..10806 | - | 552 | WP_170883280.1 | integrase core domain-containing protein | - |
| JL003_RS26280 () | 10951..12564 | - | 1614 | WP_011666429.1 | IS66 family transposase | - |
| JL003_RS26285 () | 12595..12945 | - | 351 | WP_000624723.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| JL003_RS26290 () | 12942..13367 | - | 426 | WP_011666428.1 | IS66 family insertion sequence hypothetical protein | - |
| JL003_RS26295 () | 13454..14189 | - | 736 | Protein_15 | transposase | - |
| JL003_RS26300 () | 14402..15790 | - | 1389 | WP_011666425.1 | group II intron reverse transcriptase/maturase | - |
| JL003_RS26305 () | 16269..16781 | - | 513 | WP_011666424.1 | aggregative adherence fimbria 4 major subunit Agg4A/HdaA | - |
| JL003_RS26310 () | 16855..17282 | - | 428 | Protein_18 | aggregative adherence fimbria 4 minor subunit Agg4B/HdaB | - |
| JL003_RS26315 () | 17299..19827 | - | 2529 | WP_011666422.1 | aggregative adherence fimbria 4 usher protein Agg4C/HdaC | - |
| JL003_RS26320 () | 19876..20559 | - | 684 | WP_115199248.1 | aggregative adherence fimbria 4 chaperone Agg4D/HdaD | - |
| JL003_RS26325 () | 21021..21755 | + | 735 | Protein_21 | IS66 family transposase | - |
| JL003_RS26330 () | 22252..26346 | - | 4095 | WP_011666418.1 | serine protease autotransporter toxin SepA | - |
| JL003_RS26335 () | 26655..27293 | - | 639 | Protein_23 | recombinase family protein | - |
| JL003_RS26340 () | 27423..27711 | + | 289 | Protein_24 | DUF4158 domain-containing protein | - |
| JL003_RS26345 () | 27756..28967 | - | 1212 | Protein_25 | IS3 family transposase | - |
| JL003_RS26350 () | 29223..29413 | + | 191 | Protein_26 | IS630 family transposase | - |
| JL003_RS26355 () | 29475..30419 | - | 945 | WP_200974128.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| JL003_RS26360 () | 30484..31434 | - | 951 | WP_011666407.1 | virulence factor VirK | - |
| JL003_RS26365 () | 31439..32527 | - | 1089 | WP_011666408.1 | putative hexosyltransferase CapU | - |
| JL003_RS26370 () | 32530..33372 | - | 843 | WP_170884673.1 | polysaccharide deacetylase family protein | - |
| JL003_RS26375 () | 34052..34297 | - | 246 | WP_011666412.1 | hypothetical protein | - |
| JL003_RS26380 () | 34591..35006 | - | 416 | Protein_32 | transposase | - |
| JL003_RS26385 () | 35106..35903 | - | 798 | WP_011666414.1 | aggregative adherence transcriptional regulator AggR | - |
| JL003_RS26390 () | 36429..37631 | + | 1203 | Protein_34 | IS3 family transposase | - |
| JL003_RS26395 () | 38133..38672 | - | 540 | WP_011666517.1 | NUDIX domain-containing protein | - |
| JL003_RS26400 () | 38682..39704 | - | 1023 | WP_011666516.1 | class 1 isoprenoid biosynthesis enzyme | - |
| JL003_RS26405 () | 39952..40437 | + | 486 | Protein_37 | IS3 family transposase | - |
| JL003_RS26410 () | 40529..40822 | + | 294 | Protein_38 | transposase | - |
| JL003_RS26415 () | 41416..41766 | + | 351 | WP_011666513.1 | dispersin Aap | - |
| JL003_RS26420 () | 41889..42621 | - | 733 | Protein_40 | transposase zinc-binding domain-containing protein | - |
| JL003_RS26425 () | 43021..43964 | - | 944 | Protein_41 | IS3 family transposase | - |
| JL003_RS26430 () | 43966..44850 | + | 885 | Protein_42 | IS21 family transposase | - |
| JL003_RS26435 () | 44847..45116 | + | 270 | Protein_43 | IS21-like element IS100kyp family helper ATPase IstB | - |
| JL003_RS26440 () | 45322..45609 | - | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JL003_RS26445 () | 45606..45857 | - | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JL003_RS26450 () | 45930..46121 | - | 192 | WP_000829597.1 | hypothetical protein | - |
| JL003_RS26455 () | 46822..47679 | - | 858 | WP_011666504.1 | incFII family plasmid replication initiator RepA | - |
| JL003_RS26460 () | 47672..47746 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JL003_RS26465 () | 47971..48231 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| JL003_RS26470 () | 48471..49061 | - | 591 | WP_000766812.1 | DUF2726 domain-containing protein | - |
| JL003_RS26475 () | 49099..49308 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| JL003_RS26480 () | 49354..49809 | - | 456 | WP_137519678.1 | thermonuclease family protein | - |
| JL003_RS26485 () | 49879..50313 | + | 435 | WP_001309734.1 | IS66 family insertion sequence hypothetical protein | - |
| JL003_RS26490 () | 50310..50660 | + | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| JL003_RS26495 () | 50691..52304 | + | 1614 | WP_000080172.1 | IS66-like element ISEc43 family transposase | - |
| JL003_RS26500 () | 52611..52823 | - | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| JL003_RS26505 () | 52955..53515 | - | 561 | WP_011666502.1 | fertility inhibition protein FinO | - |
| JL003_RS26510 () | 53570..54316 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| JL003_RS26515 () | 54336..59606 | - | 5271 | WP_011666501.1 | conjugative transfer relaxase/helicase TraI | - |
| JL003_RS26520 () | 59606..61867 | - | 2262 | WP_200974126.1 | type IV conjugative transfer system coupling protein TraD | - |
| JL003_RS26525 () | 62149..62628 | - | 480 | WP_001473214.1 | hypothetical protein | - |
| JL003_RS26530 () | 62832..63563 | - | 732 | WP_001403424.1 | complement resistance protein TraT | - |
| JL003_RS26535 () | 63612..64097 | - | 486 | WP_077513832.1 | surface exclusion protein | - |
| JL003_RS26540 () | 64113..66935 | - | 2823 | WP_011666497.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JL003_RS26545 () | 66932..68305 | - | 1374 | WP_137519651.1 | conjugal transfer protein TraH | - |
| JL003_RS26550 () | 68292..68717 | - | 426 | WP_011666495.1 | F-type conjugal transfer protein TrbF | - |
| JL003_RS26555 () | 68665..69012 | - | 348 | WP_011666494.1 | P-type conjugative transfer protein TrbJ | - |
| JL003_RS26560 () | 68942..69487 | - | 546 | WP_011666493.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JL003_RS26565 () | 69474..69758 | - | 285 | WP_011666492.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JL003_RS26570 () | 69877..70224 | - | 348 | WP_011666491.1 | conjugal transfer protein TrbA | - |
| JL003_RS26575 () | 70240..70983 | - | 744 | WP_011666490.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JL003_RS26580 () | 70976..71233 | - | 258 | WP_032269641.1 | conjugal transfer protein TrbE | - |
| JL003_RS26585 () | 71260..73110 | - | 1851 | WP_011666488.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JL003_RS26590 () | 73107..73745 | - | 639 | WP_011666487.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JL003_RS26595 () | 73754..74059 | - | 306 | WP_137519650.1 | hypothetical protein | - |
| JL003_RS26600 () | 74089..75081 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| JL003_RS26605 () | 75078..75710 | - | 633 | WP_011666485.1 | type-F conjugative transfer system protein TraW | - |
| JL003_RS26610 () | 75707..76093 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JL003_RS26615 () | 76090..78717 | - | 2628 | WP_011666484.1 | type IV secretion system protein TraC | - |
| JL003_RS26620 () | 78877..79098 | - | 222 | WP_011666483.1 | conjugal transfer protein TraR | - |
| JL003_RS26625 () | 79233..79748 | - | 516 | WP_011666482.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JL003_RS26630 () | 79748..80113 | - | 366 | WP_115189142.1 | conjugal transfer protein TrbD | - |
| JL003_RS26635 () | 80052..80639 | - | 588 | WP_115189141.1 | conjugal transfer protein TraP | - |
| JL003_RS26640 () | 80608..82059 | - | 1452 | WP_011666480.1 | conjugal transfer protein TraB | - |
| JL003_RS26645 () | 82059..82763 | - | 705 | WP_152075267.1 | type-F conjugative transfer system secretin TraK | - |
| JL003_RS26650 () | 82774..83340 | - | 567 | WP_000399805.1 | type IV conjugative transfer system protein TraE | - |
| JL003_RS26655 () | 83362..83673 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| JL003_RS26660 () | 83688..84047 | - | 360 | WP_011666478.1 | type IV conjugative transfer system pilin TraA | - |
| JL003_RS26665 () | 84080..84307 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| JL003_RS26670 () | 84444..85115 | - | 672 | WP_011666477.1 | conjugal transfer transcriptional regulator TraJ | - |
| JL003_RS26675 () | 85309..85692 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| JL003_RS26680 () | 86015..86617 | + | 603 | WP_115189140.1 | transglycosylase SLT domain-containing protein | - |
| JL003_RS26685 () | 86913..87734 | - | 822 | WP_011666475.1 | DUF945 domain-containing protein | - |
| JL003_RS26690 () | 87853..88140 | - | 288 | WP_011666474.1 | hypothetical protein | - |
| JL003_RS26695 () | 88296..88598 | - | 303 | WP_001272235.1 | hypothetical protein | - |
| JL003_RS26700 () | 88898..89210 | + | 313 | Protein_96 | hypothetical protein | - |
| JL003_RS26705 () | 89448..89609 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 89662..89872 | - | 211 | NuclAT_0 | - | - |
| - () | 89662..89872 | - | 211 | NuclAT_0 | - | - |
| - () | 89662..89872 | - | 211 | NuclAT_0 | - | - |
| - () | 89662..89872 | - | 211 | NuclAT_0 | - | - |
| JL003_RS26710 () | 89884..90603 | - | 720 | WP_011666471.1 | plasmid SOS inhibition protein A | - |
| JL003_RS26715 () | 90600..91034 | - | 435 | WP_011666470.1 | conjugation system SOS inhibitor PsiB | - |
| JL003_RS26720 () | 91089..93047 | - | 1959 | WP_011666469.1 | ParB/RepB/Spo0J family partition protein | - |
| JL003_RS26725 () | 93106..93339 | - | 234 | WP_115189135.1 | DUF905 family protein | - |
| JL003_RS26730 () | 93397..93924 | - | 528 | WP_011666467.1 | single-stranded DNA-binding protein | - |
| JL003_RS26735 () | 94281..94493 | + | 213 | WP_176451258.1 | hypothetical protein | - |
| JL003_RS26740 () | 94397..94663 | - | 267 | WP_200974127.1 | hypothetical protein | - |
| JL003_RS26745 () | 94815..95378 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| JL003_RS26750 () | 95425..96786 | - | 1362 | WP_011666465.1 | DUF3560 domain-containing protein | - |
| JL003_RS26755 () | 96838..97068 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| JL003_RS26760 () | 97584..97832 | + | 249 | WP_115199249.1 | hypothetical protein | - |
| JL003_RS26765 () | 98108..98299 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| JL003_RS26770 () | 98296..98718 | - | 423 | WP_011666462.1 | DUF1380 family protein | - |
| JL003_RS26775 () | 98765..99067 | - | 303 | WP_072126845.1 | antirestriction protein | - |
| JL003_RS26780 () | 99605..100381 | - | 777 | WP_170989444.1 | hypothetical protein | - |
| JL003_RS26785 () | 100432..100866 | - | 435 | Protein_113 | DUF1380 domain-containing protein | - |
| JL003_RS26790 () | 100880..101101 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| JL003_RS26795 () | 101102..101785 | - | 684 | WP_011666458.1 | DNA methylase | - |
| JL003_RS26800 () | 101861..102172 | - | 312 | WP_011666457.1 | hypothetical protein | - |
| JL003_RS26805 () | 102169..103071 | - | 903 | WP_137519515.1 | DUF1281 domain-containing protein | - |
| JL003_RS26810 () | 103489..103737 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| JL003_RS26815 () | 103734..104171 | + | 438 | WP_011666454.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JL003_RS26820 () | 104171..105441 | + | 1271 | Protein_120 | translesion error-prone DNA polymerase V subunit UmuC | - |
| JL003_RS26825 () | 105446..105838 | - | 393 | WP_000340833.1 | plasmid partitioning/stability family protein | - |
| JL003_RS26830 () | 105843..106814 | - | 972 | WP_001103694.1 | hypothetical protein | - |
| JL003_RS26835 () | 107043..107687 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| JL003_RS26840 () | 107681..107956 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| JL003_RS26845 () | 108067..108903 | - | 837 | WP_011666452.1 | site-specific integrase | - |
| JL003_RS26850 () | 108904..109209 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JL003_RS26855 () | 109211..109429 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JL003_RS26860 () | 109990..110241 | + | 252 | WP_115189130.1 | hypothetical protein | - |
| JL003_RS26865 () | 110241..110831 | + | 591 | WP_011666449.1 | hypothetical protein | - |
| JL003_RS26870 () | 110849..111196 | - | 348 | WP_024234846.1 | hypothetical protein | - |
| JL003_RS26875 () | 111370..111660 | + | 291 | WP_011666447.1 | hypothetical protein | - |
| JL003_RS26880 () | 111682..112167 | - | 486 | Protein_132 | hypothetical protein | - |
| JL003_RS26885 () | 112253..112596 | - | 344 | Protein_133 | transposase | - |
| JL003_RS26890 () | 112709..113770 | - | 1062 | WP_011666443.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|