MGE detailed information
MGE type: Genomic_island MGE length: 89162 bp
Accession: NZ_AP022605 Location: 1883945..1973106 Organism: Mycolicibacterium doricum strain JCM 12405 Replicon: chromosome
Accession: NZ_AP022605 Location: 1883945..1973106 Organism: Mycolicibacterium doricum strain JCM 12405 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6N07_RS09315 () | 1879091..1879396 | - | 306 | WP_064872625.1 | DUF3703 domain-containing protein | - |
| G6N07_RS09320 () | 1879542..1881659 | - | 2118 | WP_064872627.1 | cation-translocating P-type ATPase | - |
| G6N07_RS09325 () | 1881652..1882038 | - | 387 | WP_064872630.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| G6N07_RS09330 () | 1882310..1883071 | + | 762 | WP_064872679.1 | hypothetical protein | - |
| G6N07_RS09335 () | 1883068..1883667 | - | 600 | WP_064872681.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| G6N07_RS09340 () | 1883909..1884256 | + | 348 | WP_082947874.1 | alkylmercury lyase | - |
| G6N07_RS09345 () | 1884547..1885230 | + | 684 | WP_064872634.1 | DUF305 domain-containing protein | - |
| G6N07_RS09350 () | 1885250..1886434 | - | 1185 | WP_064872636.1 | Signal transduction histidine-protein kinase BaeS | VF |
| G6N07_RS09355 () | 1886431..1887186 | - | 756 | WP_064872639.1 | Transcriptional regulatory protein WalR | VF |
| G6N07_RS09360 () | 1887315..1887551 | + | 237 | WP_163647379.1 | hypothetical protein | - |
| G6N07_RS09365 () | 1887556..1888965 | - | 1410 | WP_064872641.1 | Peptidoglycan endopeptidase RipA | VF |
| G6N07_RS09370 () | 1889399..1889755 | + | 357 | WP_064872643.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| G6N07_RS09375 () | 1889755..1890675 | + | 921 | WP_064872683.1 | M56 family metallopeptidase | - |
| G6N07_RS09380 () | 1890957..1891631 | + | 675 | WP_082947875.1 | Response regulator MprA | VF |
| G6N07_RS09385 () | 1891687..1892457 | - | 771 | WP_064872646.1 | Peptidoglycan endopeptidase RipB | VF |
| G6N07_RS09390 () | 1892978..1894201 | - | 1224 | WP_064872649.1 | L,D-transpeptidase family protein | - |
| G6N07_RS09395 () | 1894681..1895489 | - | 809 | Protein_1855 | alpha/beta hydrolase | - |
| G6N07_RS09400 () | 1895646..1895858 | + | 213 | WP_064872654.1 | heavy-metal-associated domain-containing protein | - |
| G6N07_RS09405 () | 1895855..1896814 | + | 960 | WP_064872656.1 | hypothetical protein | - |
| G6N07_RS09410 () | 1896855..1899161 | + | 2307 | WP_064872685.1 | Copper-exporting P-type ATPase | VF |
| G6N07_RS09415 () | 1899171..1899446 | + | 276 | WP_082947876.1 | hypothetical protein | - |
| G6N07_RS09420 () | 1899496..1899825 | + | 330 | WP_064872658.1 | metal-sensitive transcriptional regulator | - |
| G6N07_RS09425 () | 1899909..1902032 | + | 2124 | WP_064872661.1 | Copper-exporting P-type ATPase B | VF |
| G6N07_RS09430 () | 1902246..1903100 | - | 855 | WP_082947877.1 | hypothetical protein | - |
| G6N07_RS09435 () | 1903323..1904482 | + | 1160 | WP_099050155.1 | IS3 family transposase ISMsm7 | Transposase |
| G6N07_RS09440 () | 1904731..1905204 | + | 474 | WP_082947878.1 | MPT63 family protein | - |
| G6N07_RS09445 () | 1905549..1908038 | - | 2490 | WP_064872282.1 | AMP-binding protein | - |
| G6N07_RS09450 () | 1908049..1909128 | - | 1080 | WP_064872274.1 | Fe(3+) ions import ATP-binding protein FbpC 2 | VF |
| G6N07_RS09455 () | 1909125..1910690 | - | 1566 | WP_064872280.1 | Sulfate transport system permease protein CysW | VF |
| G6N07_RS09460 () | 1910740..1911762 | - | 1023 | WP_064872272.1 | Fe(3+)-binding periplasmic protein | VF |
| G6N07_RS09465 () | 1911907..1912863 | + | 957 | WP_082947858.1 | hypothetical protein | - |
| G6N07_RS09470 () | 1912850..1913626 | + | 777 | WP_165607516.1 | hypothetical protein | - |
| G6N07_RS09475 () | 1914404..1914745 | - | 342 | WP_064872268.1 | DUF3703 domain-containing protein | - |
| G6N07_RS09480 () | 1914758..1914922 | - | 165 | WP_179959970.1 | hypothetical protein | - |
| G6N07_RS09485 () | 1915064..1915687 | - | 624 | WP_064872266.1 | class I SAM-dependent methyltransferase | - |
| G6N07_RS09490 () | 1915978..1917591 | - | 1614 | WP_099050156.1 | apolipoprotein N-acyltransferase | - |
| G6N07_RS09495 () | 1917768..1918409 | - | 642 | WP_085188858.1 | TlpA family protein disulfide reductase | - |
| G6N07_RS09500 () | 1918797..1919195 | + | 399 | WP_179959971.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| G6N07_RS09505 () | 1919217..1919594 | + | 378 | WP_110807719.1 | Lipoprotein signal peptidase | VF |
| G6N07_RS09510 () | 1919591..1920193 | + | 603 | WP_064875957.1 | cadmium resistance transporter | - |
| G6N07_RS09515 () | 1920261..1920389 | + | 129 | Protein_1879 | TlpA family protein disulfide reductase | - |
| G6N07_RS09520 () | 1920631..1921041 | - | 411 | WP_085192573.1 | PIN domain nuclease | Toxin Detail |
| G6N07_RS09525 () | 1921032..1921259 | - | 228 | WP_064876252.1 | hypothetical protein | Antitoxin Detail |
| G6N07_RS09530 () | 1921893..1923620 | + | 1728 | WP_082947967.1 | O-acetyl-ADP-ribose deacetylase | - |
| G6N07_RS09535 () | 1923884..1924862 | + | 979 | Protein_1883 | hypothetical protein | - |
| G6N07_RS09540 () | 1925477..1925947 | - | 471 | WP_085192470.1 | hypothetical protein | - |
| G6N07_RS09545 () | 1926060..1926972 | - | 913 | Protein_1885 | Serine protease Do-like HtrA | VF |
| G6N07_RS09550 () | 1926965..1927480 | - | 516 | WP_064874676.1 | YbjN domain-containing protein | - |
| G6N07_RS09555 () | 1927514..1930882 | - | 3369 | WP_179959972.1 | DUF499 domain-containing protein | - |
| G6N07_RS09560 () | 1930882..1932723 | - | 1842 | WP_085192659.1 | DUF262 domain-containing protein | - |
| G6N07_RS09565 () | 1932725..1935551 | - | 2827 | Protein_1889 | DUF1156 domain-containing protein | - |
| G6N07_RS09570 () | 1935551..1938961 | - | 3411 | WP_064874045.1 | DUF3883 domain-containing protein | - |
| G6N07_RS09575 () | 1939088..1942642 | + | 3555 | WP_082947931.1 | helicase SNF2 | - |
| G6N07_RS09580 () | 1942653..1942967 | - | 315 | WP_064874043.1 | hypothetical protein | - |
| G6N07_RS09585 () | 1942964..1943461 | - | 498 | WP_131810932.1 | hypothetical protein | - |
| G6N07_RS09590 () | 1943884..1944915 | - | 1032 | WP_064874038.1 | ATP-binding protein | - |
| G6N07_RS09595 () | 1944923..1946902 | - | 1980 | WP_064874062.1 | hypothetical protein ; Integrase | Integrase |
| G6N07_RS09600 () | 1946983..1947897 | - | 915 | WP_082947930.1 | TnsA-like heteromeric transposase endonuclease subunit | - |
| G6N07_RS09605 () | 1948099..1948743 | + | 645 | WP_064874036.1 | hypothetical protein | - |
| G6N07_RS09610 () | 1948905..1949873 | + | 969 | WP_064874034.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| G6N07_RS09615 () | 1949866..1952415 | + | 2550 | WP_064874032.1 | S8 family peptidase | - |
| G6N07_RS09620 () | 1953293..1954048 | + | 756 | WP_085192657.1 | TnsA-like heteromeric transposase endonuclease subunit | - |
| G6N07_RS09625 () | 1954045..1956096 | + | 2052 | WP_085192661.1 | hypothetical protein ; Integrase | Integrase |
| G6N07_RS09630 () | 1956099..1957136 | + | 1038 | WP_085192656.1 | ATP-binding protein | - |
| G6N07_RS19830 () | 1957133..1957978 | + | 846 | WP_179959973.1 | hypothetical protein | - |
| G6N07_RS09640 () | 1958097..1960997 | + | 2901 | WP_085192654.1 | DEAD/DEAH box helicase | - |
| G6N07_RS09645 () | 1961059..1963095 | + | 2037 | WP_085192653.1 | site-specific DNA-methyltransferase | - |
| G6N07_RS09650 () | 1963095..1966082 | + | 2988 | WP_085192652.1 | DEAD/DEAH box helicase family protein | - |
| G6N07_RS09655 () | 1966183..1969023 | + | 2841 | WP_163784164.1 | AAA family ATPase | - |
| G6N07_RS09660 () | 1969188..1969586 | - | 399 | WP_085192650.1 | type II toxin-antitoxin system VapC family toxin | - |
| G6N07_RS09665 () | 1969607..1969843 | - | 237 | WP_085192649.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| G6N07_RS09670 () | 1969980..1970312 | - | 333 | WP_085192648.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| G6N07_RS09675 () | 1970309..1970515 | - | 207 | WP_085192647.1 | antitoxin MazE family protein | Antitoxin Detail |
| G6N07_RS09680 () | 1970692..1971003 | - | 312 | WP_085192646.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| G6N07_RS09685 () | 1970993..1971226 | - | 234 | WP_085192645.1 | hypothetical protein | - |
| G6N07_RS09690 () | 1971707..1973106 | - | 1400 | Protein_1914 | IS1380 family transposase ISStr1 | Transposase |
| G6N07_RS19890 () | 1973714..1973812 | + | 99 | WP_197913023.1 | DUF2254 domain-containing protein | - |
| G6N07_RS19895 () | 1973853..1974215 | + | 363 | WP_197913024.1 | hypothetical protein | - |
| G6N07_RS09700 () | 1974260..1975141 | - | 882 | WP_197913038.1 | glycosyltransferase | - |
| G6N07_RS09705 () | 1975174..1976034 | - | 861 | WP_085187300.1 | polysaccharide pyruvyl transferase family protein | - |
| G6N07_RS09710 () | 1976076..1976861 | - | 786 | WP_163784166.1 | FkbM family methyltransferase | - |
| G6N07_RS09715 () | 1977216..1977740 | - | 525 | WP_085187295.1 | DUF421 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|