MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 216341 bp
Accession: NZ_AP022571 Location: 1..216341 Organism: Mycolicibacterium poriferae strain JCM 12603 Replicon: plasmid pJCM12603
Accession: NZ_AP022571 Location: 1..216341 Organism: Mycolicibacterium poriferae strain JCM 12603 Replicon: plasmid pJCM12603
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
G6N39_RS27010 () | 1..552 | + | 552 | Protein_0 | hypothetical protein | - |
G6N39_RS27015 () | 559..1486 | - | 928 | Protein_1 | Immunogenic protein MPT63 | VF |
G6N39_RS27020 () | 1582..4398 | - | 2817 | Protein_2 | Multifunctional conjugation protein TraI | Relaxase |
G6N39_RS27025 () | 4929..5315 | - | 387 | WP_163680953.1 | hypothetical protein | - |
G6N39_RS27030 () | 5445..5732 | - | 288 | WP_011767732.1 | hypothetical protein | - |
G6N39_RS27035 () | 6114..7060 | - | 947 | Protein_5 | DUF4192 domain-containing protein | - |
G6N39_RS27040 () | 7457..7918 | - | 462 | WP_163680958.1 | hypothetical protein | - |
G6N39_RS27045 () | 7944..8237 | - | 294 | WP_006247759.1 | hypothetical protein | - |
G6N39_RS27050 () | 8618..8929 | - | 312 | WP_048469560.1 | hypothetical protein | - |
G6N39_RS27055 () | 9337..9879 | - | 543 | WP_163680961.1 | hypothetical protein | - |
G6N39_RS27060 () | 9946..10311 | - | 366 | WP_163680964.1 | hypothetical protein | - |
G6N39_RS27065 () | 10700..10951 | - | 252 | WP_013470231.1 | hypothetical protein | - |
G6N39_RS27070 () | 11341..11697 | - | 357 | WP_099962857.1 | helix-turn-helix domain-containing protein | - |
G6N39_RS27075 () | 11694..12083 | - | 390 | WP_163680969.1 | hypothetical protein | - |
G6N39_RS27080 () | 12246..12521 | - | 276 | WP_163680972.1 | hypothetical protein | - |
G6N39_RS27085 () | 12598..13056 | - | 459 | WP_163680974.1 | hypothetical protein | - |
G6N39_RS27090 () | 13440..14099 | - | 660 | WP_163680976.1 | hypothetical protein | - |
G6N39_RS27095 () | 14486..14971 | - | 486 | WP_163680978.1 | hypothetical protein | - |
G6N39_RS27100 () | 15051..15626 | - | 576 | WP_163680980.1 | hypothetical protein | - |
G6N39_RS27105 () | 16001..16288 | - | 288 | WP_163680982.1 | hypothetical protein | - |
G6N39_RS27110 () | 16366..16905 | - | 540 | WP_163680984.1 | hypothetical protein | - |
G6N39_RS27115 () | 17446..18117 | - | 672 | WP_163680986.1 | hypothetical protein | - |
G6N39_RS27120 () | 18197..18388 | - | 192 | WP_006247565.1 | hypothetical protein | - |
G6N39_RS27125 () | 18388..19008 | - | 621 | WP_006247566.1 | hypothetical protein | - |
G6N39_RS27130 () | 19005..19643 | - | 639 | WP_163680988.1 | hypothetical protein | - |
G6N39_RS27135 () | 19673..19918 | - | 246 | WP_006247568.1 | glutaredoxin-like protein NrdH | - |
G6N39_RS27140 () | 20516..22156 | - | 1641 | WP_163680991.1 | ParB N-terminal domain-containing protein | - |
G6N39_RS27145 () | 22601..23635 | - | 1035 | WP_163680994.1 | DUF945 domain-containing protein | - |
G6N39_RS28110 () | 23975..24142 | + | 168 | WP_170311245.1 | hypothetical protein | - |
G6N39_RS27150 () | 24165..25369 | - | 1205 | Protein_29 | hypothetical protein | - |
G6N39_RS27155 () | 25731..26186 | + | 456 | WP_006247573.1 | hypothetical protein | - |
G6N39_RS27160 () | 26202..27158 | + | 957 | WP_163680997.1 | hypothetical protein | - |
G6N39_RS27165 () | 27232..29109 | + | 1878 | WP_163681000.1 | hypothetical protein | - |
G6N39_RS27170 () | 29189..30175 | + | 987 | WP_163681002.1 | non-homologous end-joining DNA ligase | - |
G6N39_RS27175 () | 30176..31732 | - | 1557 | WP_163681005.1 | Serine/threonine-protein kinase PknJ | VF |
G6N39_RS27180 () | 31779..32189 | - | 411 | WP_163681009.1 | PIN domain nuclease | Toxin Detail |
G6N39_RS27185 () | 32180..32407 | - | 228 | WP_048471216.1 | hypothetical protein | Antitoxin Detail |
G6N39_RS27190 () | 32552..33508 | + | 957 | WP_048424157.1 | DUF4226 domain-containing protein | - |
G6N39_RS27195 () | 33540..33803 | - | 264 | WP_163681011.1 | hypothetical protein | - |
G6N39_RS27200 () | 33934..34266 | + | 333 | WP_084032489.1 | hypothetical protein | - |
G6N39_RS27205 () | 34345..35049 | - | 705 | WP_163681014.1 | hypothetical protein | - |
G6N39_RS27210 () | 35506..36705 | + | 1200 | WP_163681017.1 | helix-turn-helix transcriptional regulator | - |
G6N39_RS27215 () | 36711..37627 | + | 917 | Protein_42 | hypothetical protein | - |
G6N39_RS27220 () | 37733..38041 | + | 309 | WP_011767776.1 | hypothetical protein | - |
G6N39_RS27225 () | 38667..39872 | - | 1206 | WP_163681022.1 | MFS transporter | - |
G6N39_RS27230 () | 39910..40413 | - | 504 | WP_163681263.1 | chromate resistance protein ChrB | - |
G6N39_RS27235 () | 40619..41029 | - | 411 | WP_163681025.1 | heavy metal-responsive transcriptional regulator | - |
G6N39_RS27240 () | 41144..42496 | + | 1353 | WP_163681028.1 | NAD(P)/FAD-dependent oxidoreductase | - |
G6N39_RS27245 () | 42717..43193 | + | 477 | WP_163681031.1 | recombinase family protein | - |
G6N39_RS27250 () | 43673..44703 | + | 1031 | Protein_49 | tyrosine-type recombinase/integrase | - |
G6N39_RS27255 () | 45063..46832 | + | 1770 | WP_163681265.1 | hypothetical protein | - |
G6N39_RS27260 () | 47124..48176 | + | 1053 | WP_163681266.1 | DUF2637 domain-containing protein | - |
G6N39_RS27265 () | 48535..48723 | - | 189 | WP_153266298.1 | hypothetical protein | - |
G6N39_RS27270 () | 48918..49361 | + | 444 | WP_041321969.1 | hypothetical protein | - |
G6N39_RS27275 () | 49365..50201 | - | 837 | WP_115329203.1 | ParB N-terminal domain-containing protein | - |
G6N39_RS27280 () | 50201..50914 | - | 714 | WP_011767788.1 | ParA family protein | - |
G6N39_RS27285 () | 51667..52419 | + | 753 | WP_163681035.1 | hypothetical protein | - |
G6N39_RS27290 () | 53447..54376 | + | 930 | WP_115329205.1 | Chromosome-partitioning ATPase Soj | VF |
G6N39_RS27295 () | 54373..55065 | + | 693 | WP_163681037.1 | hypothetical protein | - |
G6N39_RS27300 () | 55099..55803 | - | 705 | WP_163681042.1 | WhiB family transcriptional regulator | - |
G6N39_RS27305 () | 55800..56996 | - | 1197 | WP_163681045.1 | helix-turn-helix domain-containing protein | - |
G6N39_RS27310 () | 57699..57989 | - | 291 | WP_083775475.1 | WhiB family transcriptional regulator | - |
G6N39_RS27315 () | 58201..58914 | + | 714 | WP_170311246.1 | transcriptional regulator | - |
G6N39_RS27320 () | 59002..59312 | + | 311 | Protein_63 | thermonuclease family protein | - |
G6N39_RS27325 () | 59534..60664 | + | 1131 | WP_163681051.1 | lytic transglycosylase | - |
G6N39_RS27330 () | 61049..61609 | - | 561 | WP_163681054.1 | RES domain-containing protein | Toxin Detail |
G6N39_RS27335 () | 61606..61947 | - | 342 | WP_163681057.1 | DUF2384 domain-containing protein | Antitoxin Detail |
G6N39_RS27340 () | 62034..62328 | + | 295 | Protein_67 | hypothetical protein | - |
G6N39_RS27345 () | 62346..63185 | + | 840 | WP_163681060.1 | hypothetical protein | - |
G6N39_RS27350 () | 63300..63533 | + | 234 | WP_163681064.1 | DUF2188 domain-containing protein | - |
G6N39_RS27355 () | 63620..64027 | - | 408 | WP_163681067.1 | hypothetical protein | - |
G6N39_RS27360 () | 64313..64621 | + | 309 | WP_163681069.1 | hypothetical protein | - |
G6N39_RS27365 () | 64773..66089 | + | 1317 | WP_163681267.1 | L,D-transpeptidase family protein | - |
G6N39_RS27370 () | 66650..67315 | + | 666 | WP_163681073.1 | thioredoxin domain-containing protein | - |
G6N39_RS27375 () | 67480..68052 | - | 573 | WP_163681268.1 | copper resistance protein CopC | - |
G6N39_RS27380 () | 68319..69365 | - | 1047 | WP_163681270.1 | putative endopeptidase | VF |
G6N39_RS27385 () | 69706..70299 | + | 594 | WP_163681076.1 | heme-copper oxidase subunit III | - |
G6N39_RS27395 () | 71068..71688 | + | 621 | WP_163681082.1 | TlpA family protein disulfide reductase | - |
G6N39_RS27400 () | 71759..72754 | + | 996 | WP_163681085.1 | cytochrome c oxidase assembly protein | - |
G6N39_RS27405 () | 73529..74473 | - | 945 | WP_163681088.1 | M56 family metallopeptidase | - |
G6N39_RS27410 () | 74470..74856 | - | 387 | WP_163681092.1 | BlaI/MecI/CopY family transcriptional regulator | - |
G6N39_RS27415 () | 75145..76170 | - | 1026 | WP_163681272.1 | M23 family metallopeptidase | - |
G6N39_RS27420 () | 76681..78426 | + | 1746 | WP_163681095.1 | cytochrome c oxidase subunit I | - |
G6N39_RS27425 () | 78589..79071 | + | 483 | WP_163681098.1 | hypothetical protein | - |
G6N39_RS27430 () | 79249..80230 | + | 982 | Protein_84 | c-type cytochrome biogenesis protein CcsB | - |
G6N39_RS27435 () | 80804..81634 | + | 831 | WP_163681274.1 | L,D-transpeptidase family protein | - |
G6N39_RS27440 () | 82026..84584 | + | 2559 | WP_163681101.1 | heavy metal translocating P-type ATPase | - |
G6N39_RS28195 () | 84602..85120 | - | 519 | WP_179967680.1 | hypothetical protein | - |
G6N39_RS27450 () | 85424..85993 | - | 570 | WP_163681107.1 | hypothetical protein | - |
G6N39_RS27455 () | 86156..86509 | - | 354 | WP_163681110.1 | hypothetical protein | - |
G6N39_RS27460 () | 87283..88239 | - | 957 | WP_163681112.1 | L,D-transpeptidase | - |
G6N39_RS27465 () | 88379..89149 | + | 771 | WP_163681115.1 | cytochrome c biogenesis CcdA family protein | - |
G6N39_RS27470 () | 89258..91183 | + | 1926 | WP_163681119.1 | bifunctional copper resistance protein CopD/cytochrome c oxidase assembly protein | - |
G6N39_RS27475 () | 91519..92280 | + | 762 | WP_163681276.1 | serine hydrolase | - |
G6N39_RS27480 () | 92667..93848 | - | 1182 | WP_163681122.1 | NAD(P)/FAD-dependent oxidoreductase | - |
G6N39_RS27485 () | 93978..94709 | - | 732 | WP_163681125.1 | ZIP family metal transporter | - |
G6N39_RS27490 () | 94754..95293 | - | 540 | WP_163681128.1 | hypothetical protein | - |
G6N39_RS27495 () | 95560..96345 | + | 786 | WP_163681132.1 | YHS domain-containing protein | - |
G6N39_RS27500 () | 96390..97013 | + | 624 | WP_163681135.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
G6N39_RS27505 () | 97177..97956 | + | 780 | WP_163681138.1 | hypothetical protein | VF |
G6N39_RS27510 () | 98004..98972 | + | 969 | WP_163681141.1 | sterol desaturase family protein | - |
G6N39_RS27515 () | 99099..99485 | + | 387 | WP_163681143.1 | metalloregulator ArsR/SmtB family transcription factor | - |
G6N39_RS27520 () | 99478..101604 | + | 2127 | WP_163681146.1 | cadmium-translocating P-type ATPase | - |
G6N39_RS27525 () | 101640..101981 | + | 342 | WP_163681149.1 | DUF3703 domain-containing protein | - |
G6N39_RS27530 () | 102101..102559 | + | 459 | WP_163681152.1 | hypothetical protein | - |
G6N39_RS27535 () | 103342..105732 | + | 2391 | WP_163681155.1 | heavy metal translocating P-type ATPase | - |
G6N39_RS27540 () | 105769..106182 | - | 414 | WP_011780861.1 | DUF302 domain-containing protein | - |
G6N39_RS27545 () | 106403..107116 | + | 714 | WP_163681158.1 | DUF305 domain-containing protein | - |
G6N39_RS27550 () | 107178..108323 | - | 1146 | WP_163681161.1 | Signal transduction histidine-protein kinase BaeS | VF |
G6N39_RS27555 () | 108320..109060 | - | 741 | WP_137149486.1 | Transcriptional regulatory protein WalR | VF |
G6N39_RS27560 () | 109189..109416 | + | 228 | WP_163681278.1 | hypothetical protein | - |
G6N39_RS27565 () | 109413..110951 | + | 1539 | WP_163681280.1 | multicopper oxidase family protein | - |
G6N39_RS27570 () | 111093..111347 | + | 255 | WP_011767898.1 | hypothetical protein | - |
G6N39_RS27575 () | 111429..113777 | - | 2349 | WP_163681164.1 | heavy metal translocating P-type ATPase | - |
G6N39_RS27580 () | 113816..114058 | - | 243 | WP_163681167.1 | cation transporter | - |
G6N39_RS27585 () | 114212..114505 | - | 294 | WP_163681171.1 | metal-sensitive transcriptional regulator | - |
G6N39_RS27590 () | 115903..116103 | + | 201 | WP_163681174.1 | hypothetical protein | - |
G6N39_RS27595 () | 116145..117554 | - | 1410 | WP_163681177.1 | Peptidoglycan endopeptidase RipA | VF |
G6N39_RS27600 () | 117934..118299 | + | 366 | WP_163681180.1 | BlaI/MecI/CopY family transcriptional regulator | - |
G6N39_RS27605 () | 118296..119216 | + | 921 | WP_159232845.1 | M56 family metallopeptidase | - |
G6N39_RS27610 () | 119605..120336 | + | 732 | WP_163681282.1 | DNA-binding response regulator MtrA | VF |
G6N39_RS27615 () | 120400..121170 | - | 771 | WP_163681183.1 | Peptidoglycan endopeptidase RipB | VF |
G6N39_RS27620 () | 121689..122911 | - | 1223 | Protein_122 | L,D-transpeptidase family protein | - |
G6N39_RS27625 () | 123324..124405 | + | 1082 | Protein_123 | IS110 family transposase ISEc45 | Transposase |
G6N39_RS27630 () | 124712..125695 | - | 984 | WP_163681185.1 | IS481 family transposase ISMav3 | Transposase |
G6N39_RS27635 () | 126114..127196 | - | 1083 | WP_170311247.1 | IS110 family transposase ISSso6 | Transposase |
G6N39_RS27640 () | 127359..128320 | - | 962 | Protein_126 | sterol desaturase family protein | - |
G6N39_RS27645 () | 128477..129334 | - | 858 | WP_163681191.1 | hypothetical protein | - |
G6N39_RS27650 () | 129759..130994 | - | 1236 | WP_159233604.1 | IS256 family transposase IS1512 | Transposase |
G6N39_RS27660 () | 131515..131763 | - | 249 | WP_163681193.1 | hypothetical protein | - |
G6N39_RS27670 () | 133403..134494 | + | 1092 | WP_115329250.1 | hypothetical protein | - |
G6N39_RS27675 () | 134535..135623 | + | 1089 | WP_115329229.1 | putative endopeptidase | VF |
G6N39_RS27680 () | 135920..137839 | + | 1920 | WP_115329230.1 | DUF4226 domain-containing protein | - |
G6N39_RS27685 () | 137902..138210 | + | 309 | WP_115329231.1 | hypothetical protein | - |
G6N39_RS27690 () | 138197..138505 | + | 309 | WP_115329232.1 | DUF2694 family protein | - |
G6N39_RS27695 () | 138510..140174 | + | 1665 | WP_115329233.1 | PPE domain-containing protein | - |
G6N39_RS27700 () | 140174..140506 | + | 333 | WP_115329234.1 | hypothetical protein | - |
G6N39_RS27705 () | 140988..141644 | + | 657 | WP_115329235.1 | hypothetical protein | - |
G6N39_RS27710 () | 141666..144194 | + | 2529 | WP_115329251.1 | chemotaxis protein | - |
G6N39_RS27715 () | 144209..144724 | + | 516 | WP_011767961.1 | hypothetical protein | - |
G6N39_RS27720 () | 144841..148998 | + | 4158 | WP_163681197.1 | type VII secretion protein EccCa | - |
G6N39_RS27725 () | 149202..149510 | + | 309 | WP_163681199.1 | PE domain-containing protein | - |
G6N39_RS27730 () | 149526..150767 | + | 1242 | WP_163681202.1 | PPE domain-containing protein | - |
G6N39_RS27735 () | 150849..151169 | + | 321 | WP_163681204.1 | hypothetical protein | - |
G6N39_RS27740 () | 151211..151507 | + | 297 | WP_048424368.1 | hypothetical protein | - |
G6N39_RS27745 () | 151607..152473 | + | 867 | WP_163681206.1 | ESX secretion-associated protein EspG | - |
G6N39_RS27750 () | 152551..154068 | + | 1518 | WP_163681208.1 | ESX-2 secretion system ATPase EccB2 | VF |
G6N39_RS27755 () | 154135..155742 | + | 1608 | WP_163681209.1 | chromosome partitioning protein | - |
G6N39_RS27760 () | 155799..157256 | + | 1458 | WP_170311248.1 | type VII secretion integral membrane protein EccD | - |
G6N39_RS27765 () | 157256..158923 | + | 1668 | WP_163681213.1 | Mycosin-2 | VF |
G6N39_RS27770 () | 158920..160623 | + | 1704 | WP_163681216.1 | type VII secretion protein EccE | - |
G6N39_RS27775 () | 160620..161480 | + | 861 | WP_163681219.1 | hypothetical protein | - |
G6N39_RS27780 () | 161538..161804 | + | 267 | WP_163681222.1 | hypothetical protein | - |
G6N39_RS27785 () | 161861..163273 | + | 1413 | WP_163681225.1 | TraM recognition domain-containing protein | - |
G6N39_RS27790 () | 163270..163599 | + | 330 | WP_163681228.1 | hypothetical protein | - |
G6N39_RS27795 () | 163765..164421 | + | 657 | WP_163681232.1 | hypothetical protein | - |
G6N39_RS27800 () | 164436..164942 | - | 507 | WP_170311249.1 | hypothetical protein | - |
G6N39_RS27805 () | 165032..165391 | + | 360 | WP_163681238.1 | hypothetical protein | - |
G6N39_RS27810 () | 165384..166505 | + | 1122 | WP_163681240.1 | hypothetical protein | - |
G6N39_RS27815 () | 166520..167434 | + | 915 | WP_163681242.1 | conjugal transfer protein | - |
G6N39_RS27820 () | 167461..167751 | + | 291 | WP_011767719.1 | hypothetical protein | - |
G6N39_RS27825 () | 167756..168103 | + | 348 | WP_163681245.1 | hypothetical protein | - |
G6N39_RS27830 () | 168117..170705 | + | 2589 | WP_163681247.1 | ATP-binding protein | - |
G6N39_RS27835 () | 170702..172729 | + | 2028 | WP_163681249.1 | hypothetical protein | - |
G6N39_RS27840 () | 172754..174535 | + | 1782 | WP_163681251.1 | ESX-2 secretion system protein EccA2 | VF |
G6N39_RS27845 () | 174637..174843 | + | 207 | WP_163681284.1 | transcriptional regulator | - |
G6N39_RS27850 () | 174854..177832 | - | 2979 | WP_163681286.1 | DEAD/DEAH box helicase | - |
G6N39_RS27855 () | 178018..179964 | - | 1947 | WP_163681253.1 | helicase | - |
G6N39_RS27860 () | 179885..181939 | - | 2055 | WP_163681255.1 | DUF87 domain-containing protein | - |
G6N39_RS28200 () | 181951..183417 | - | 1467 | WP_079869509.1 | SIR2 family protein | - |
G6N39_RS27870 () | 183780..184502 | - | 723 | WP_074338999.1 | M48 family metallopeptidase | - |
G6N39_RS27875 () | 184489..187575 | - | 3087 | WP_074339000.1 | HsdR family type I site-specific deoxyribonuclease | - |
G6N39_RS27880 () | 187572..188798 | - | 1227 | WP_074339001.1 | restriction endonuclease subunit S | - |
G6N39_RS27885 () | 188795..191230 | - | 2436 | WP_074339002.1 | type I restriction-modification system subunit M | - |
G6N39_RS27890 () | 191372..191785 | - | 414 | WP_074339003.1 | hypothetical protein | - |
G6N39_RS27895 () | 191782..193926 | - | 2145 | WP_074339004.1 | hypothetical protein | - |
G6N39_RS27900 () | 193923..195743 | - | 1821 | WP_074339005.1 | hypothetical protein | - |
G6N39_RS27905 () | 195829..196626 | - | 798 | WP_044482876.1 | IS21 family transposase ISMt2 | Transposase |
G6N39_RS27910 () | 196628..198250 | - | 1623 | WP_074338941.1 | IS21 family transposase ISMt2 | Transposase |
G6N39_RS27915 () | 198375..199847 | - | 1473 | WP_074338825.1 | tyrosine-type recombinase/integrase | - |
G6N39_RS27920 () | 199825..202860 | - | 3036 | WP_163681288.1 | DEAD/DEAH box helicase family protein | - |
G6N39_RS27925 () | 203037..203522 | - | 486 | WP_163681257.1 | hypothetical protein | - |
G6N39_RS27930 () | 203646..205229 | + | 1584 | WP_163681259.1 | putative DNA binding domain-containing protein | - |
G6N39_RS27935 () | 205234..206184 | - | 951 | WP_163681261.1 | MPT63 family protein | - |
G6N39_RS27940 () | 206280..209116 | - | 2837 | Protein_184 | ATP-dependent RecD-like DNA helicase | Relaxase |
G6N39_RS27950 () | 210275..210562 | - | 288 | WP_011767732.1 | hypothetical protein | - |
G6N39_RS27955 () | 210941..211852 | - | 912 | Protein_186 | DUF4192 family protein | - |
G6N39_RS27960 () | 212278..212723 | - | 446 | Protein_187 | hypothetical protein | - |
G6N39_RS27965 () | 212749..213043 | - | 295 | Protein_188 | hypothetical protein | - |
G6N39_RS27975 () | 214112..214649 | - | 538 | Protein_189 | hypothetical protein | - |
G6N39_RS27980 () | 214709..215068 | - | 360 | Protein_190 | hypothetical protein | - |
G6N39_RS27985 () | 215400..215642 | - | 243 | Protein_191 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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