MGE detailed information
MGE type: Genomic_island MGE length: 47477 bp
Accession: NZ_AP022569 Location: 4338838..4386314 Organism: Mycobacterium cookii strain JCM 12404 Replicon: chromosome
Accession: NZ_AP022569 Location: 4338838..4386314 Organism: Mycobacterium cookii strain JCM 12404 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6N27_RS20370 () | 4334541..4335956 | - | 1416 | WP_163779548.1 | wax ester/triacylglycerol synthase family O-acyltransferase | - |
| G6N27_RS20375 () | 4336109..4336663 | - | 555 | WP_163779550.1 | hypothetical protein | - |
| G6N27_RS20380 () | 4336690..4338362 | - | 1673 | Protein_4027 | NERD domain-containing protein | - |
| G6N27_RS20385 () | 4338844..4339728 | + | 885 | WP_163779552.1 | HNH endonuclease | - |
| G6N27_RS20390 () | 4339725..4340153 | - | 429 | WP_163779554.1 | DNA mismatch endonuclease Vsr | - |
| G6N27_RS20395 () | 4340134..4341282 | - | 1149 | WP_163782092.1 | DNA cytosine methyltransferase | - |
| G6N27_RS20400 () | 4341300..4342013 | - | 714 | WP_163779556.1 | DISARM system phospholipase D-like protein DrmC | - |
| G6N27_RS20405 () | 4342010..4344079 | - | 2070 | WP_163779559.1 | DUF1998 domain-containing protein | - |
| G6N27_RS20410 () | 4344076..4347747 | - | 3672 | WP_163779561.1 | DISARM system helicase DrmA | - |
| G6N27_RS20415 () | 4347744..4351775 | - | 4032 | WP_163779563.1 | SAM-dependent DNA methyltransferase | - |
| G6N27_RS20420 () | 4351772..4355419 | - | 3648 | WP_163779565.1 | DISARM system SNF2-like helicase DrmD | - |
| G6N27_RS20425 () | 4355475..4355894 | - | 420 | WP_163779567.1 | hypothetical protein | - |
| G6N27_RS20430 () | 4356137..4359892 | - | 3756 | WP_163779570.1 | ATP-dependent RecD-like DNA helicase | - |
| G6N27_RS20435 () | 4359899..4361845 | - | 1947 | WP_163779572.1 | AAA family ATPase | - |
| G6N27_RS20440 () | 4361842..4365189 | - | 3348 | WP_163779574.1 | DEAD/DEAH box helicase | - |
| G6N27_RS20445 () | 4365186..4366901 | - | 1716 | WP_163779576.1 | exodeoxyribonuclease V subunit alpha | - |
| G6N27_RS20450 () | 4366898..4370173 | - | 3276 | WP_163782094.1 | exodeoxyribonuclease V subunit beta | - |
| G6N27_RS20455 () | 4370173..4373457 | - | 3285 | WP_163779578.1 | exodeoxyribonuclease V subunit gamma | - |
| G6N27_RS20460 () | 4373627..4375144 | + | 1518 | WP_163779580.1 | SIR2 family protein | - |
| G6N27_RS20465 () | 4375378..4376871 | - | 1494 | WP_163779582.1 | ADP-ribosylglycohydrolase family protein | - |
| G6N27_RS20470 () | 4376903..4377592 | - | 690 | WP_163782096.1 | ankyrin repeat domain-containing protein | - |
| G6N27_RS20475 () | 4377747..4378643 | + | 897 | WP_163779585.1 | Helicase associated domain protein | - |
| G6N27_RS20480 () | 4378650..4379741 | - | 1092 | WP_163779587.1 | metallophosphoesterase | - |
| G6N27_RS20485 () | 4379680..4380219 | + | 540 | WP_163779589.1 | nitroreductase family protein | - |
| G6N27_RS20490 () | 4380321..4380566 | + | 246 | WP_163779591.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| G6N27_RS20495 () | 4380563..4380958 | + | 396 | WP_163779593.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| G6N27_RS20500 () | 4381135..4381650 | + | 516 | WP_163779595.1 | nitroreductase family protein | - |
| G6N27_RS20505 () | 4381651..4382226 | - | 576 | WP_163779597.1 | zeta toxin family protein | Toxin Detail |
| G6N27_RS20510 () | 4382223..4382654 | - | 432 | WP_163779599.1 | hypothetical protein | Antitoxin Detail |
| G6N27_RS20515 () | 4382851..4383888 | + | 1038 | WP_163779601.1 | hypothetical protein | VF |
| G6N27_RS20520 () | 4383885..4384691 | - | 807 | WP_163779603.1 | adenylate/guanylate cyclase domain-containing protein | - |
| G6N27_RS20525 () | 4384962..4386314 | + | 1353 | WP_163779605.1 | serine hydrolase | - |
| G6N27_RS20530 () | 4386365..4387129 | + | 765 | WP_163779607.1 | class I SAM-dependent methyltransferase | - |
| G6N27_RS20535 () | 4387229..4388164 | + | 936 | WP_163779609.1 | alpha/beta hydrolase | - |
| G6N27_RS25145 () | 4388224..4389921 | + | 1698 | WP_163779611.1 | N-acetylmuramic acid 6-phosphate etherase | - |
| G6N27_RS20545 () | 4389958..4390833 | - | 876 | WP_163779613.1 | polyhydroxybutyrate depolymerase | - |
| G6N27_RS20550 () | 4390932..4391216 | + | 285 | WP_163779615.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|