MGE detailed information
MGE type: IScluster/Tn MGE length: 28440 bp
Accession: NZ_AP022550 Location: 44070..72509 Organism: Escherichia coli strain THO-015 Replicon: plasmid pTHO-015-1
Accession: NZ_AP022550 Location: 44070..72509 Organism: Escherichia coli strain THO-015 Replicon: plasmid pTHO-015-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF69_RS24670 () | 41807..42553 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| JLF69_RS24675 () | 42608..43168 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| JLF69_RS24680 () | 43299..43511 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| JLF69_RS24685 () | 44070..44495 | + | 426 | WP_000422741.1 | IS66 family insertion sequence hypothetical protein | - |
| JLF69_RS24690 () | 44492..44842 | + | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| JLF69_RS24695 () | 44873..46486 | + | 1614 | WP_000080195.1 | IS66-like element ISEc23 family transposase | - |
| JLF69_RS24700 () | 46564..46850 | + | 287 | Protein_53 | DUF2726 domain-containing protein | - |
| - () | 46817..46877 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 46817..46877 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 46817..46877 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 46817..46877 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| JLF69_RS24705 () | 46922..47056 | + | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JLF69_RS24710 () | 47353..47607 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| JLF69_RS24715 () | 47713..47847 | + | 135 | Protein_56 | protein CopA/IncA | - |
| JLF69_RS24720 () | 47844..47918 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| JLF69_RS24725 () | 47911..48768 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| JLF69_RS24730 () | 49708..50361 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| JLF69_RS24735 () | 50454..50711 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| JLF69_RS24740 () | 50644..51045 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| JLF69_RS24745 () | 51294..51709 | + | 416 | Protein_62 | IS1 family transposase | - |
| JLF69_RS24750 () | 51745..52290 | - | 546 | Protein_63 | Tn3 family transposase | - |
| JLF69_RS24755 () | 52356..53060 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JLF69_RS24760 () | 53374..54249 | + | 876 | WP_032277257.1 | class A extended-spectrum beta-lactamase CTX-M-27 | - |
| JLF69_RS24765 () | 54284..54646 | + | 363 | Protein_66 | transposase | - |
| JLF69_RS24770 () | 54706..55410 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| JLF69_RS24775 () | 55463..55795 | + | 333 | Protein_68 | EamA family transporter | - |
| JLF69_RS24780 () | 55827..57026 | - | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| JLF69_RS24785 () | 57132..57758 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JLF69_RS24790 () | 57790..58026 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| JLF69_RS24795 () | 58080..58916 | - | 837 | WP_000480972.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| JLF69_RS24800 () | 58916..59719 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| JLF69_RS24805 () | 59780..60595 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| JLF69_RS24810 () | 60903..61079 | - | 177 | Protein_75 | replication protein C | - |
| JLF69_RS24815 () | 61140..61844 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JLF69_RS24820 () | 61966..62871 | + | 906 | WP_000219391.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| JLF69_RS24825 () | 62868..64106 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| JLF69_RS24830 () | 64106..64690 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| JLF69_RS24835 () | 65183..65947 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| JLF69_RS24840 () | 66065..66130 | - | 66 | Protein_81 | EAL domain-containing protein | - |
| JLF69_RS24845 () | 66174..66479 | - | 306 | WP_000130000.1 | PadR family transcriptional regulator | - |
| JLF69_RS24850 () | 66490..67695 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| JLF69_RS24855 () | 67851..68054 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| JLF69_RS24860 () | 68182..69021 | - | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| JLF69_RS24865 () | 69015..69362 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| JLF69_RS24870 () | 69568..70356 | - | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| JLF69_RS24875 () | 70487..70960 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| JLF69_RS24880 () | 71242..71946 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| JLF69_RS24885 () | 72135..72548 | - | 414 | Protein_90 | DDE-type integrase/transposase/recombinase | - |
| JLF69_RS24890 () | 72472..72831 | - | 360 | WP_001513660.1 | hypothetical protein | - |
| JLF69_RS24895 () | 72859..73038 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| JLF69_RS24900 () | 73043..73423 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JLF69_RS24905 () | 73423..73644 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JLF69_RS24910 () | 73827..75383 | + | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| JLF69_RS24915 () | 75380..76651 | + | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|