MGE detailed information
MGE type: IS/Tn MGE length: 1221 bp
Accession: NZ_AP022533 Location: 4835392..4836612 Organism: Escherichia coli strain THO-006 Replicon: chromosome
Accession: NZ_AP022533 Location: 4835392..4836612 Organism: Escherichia coli strain THO-006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JLF32_RS23125 () | 4830917..4831552 | + | 636 | WP_000829013.1 | formate dehydrogenase cytochrome b556 subunit | - |
JLF32_RS23130 () | 4831549..4832478 | + | 930 | WP_000027720.1 | formate dehydrogenase accessory protein FdhE | - |
JLF32_RS23135 () | 4832694..4832912 | - | 219 | WP_001314326.1 | ribbon-helix-helix domain-containing protein | - |
JLF32_RS23140 () | 4833308..4833586 | - | 279 | WP_001296612.1 | hypothetical protein | - |
JLF32_RS23145 () | 4833945..4834235 | - | 291 | WP_000356397.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
JLF32_RS23150 () | 4834236..4834547 | - | 312 | WP_000897302.1 | hypothetical protein | Toxin Detail |
JLF32_RS23155 () | 4834855..4835373 | + | 519 | WP_000115885.1 | ClbS/DfsB family four-helix bundle protein | - |
JLF32_RS23160 () | 4835392..4836612 | + | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
JLF32_RS23165 () | 4836670..4837578 | + | 909 | WP_001305059.1 | alpha/beta hydrolase | - |
JLF32_RS23170 () | 4837642..4838583 | - | 942 | WP_001297068.1 | fatty acid biosynthesis protein FabY | - |
JLF32_RS23175 () | 4838628..4839065 | - | 438 | WP_000560983.1 | D-tyrosyl-tRNA(Tyr) deacylase | - |
JLF32_RS23180 () | 4839062..4839934 | - | 873 | WP_000920762.1 | virulence factor BrkB family protein | - |
JLF32_RS23185 () | 4839928..4840527 | - | 600 | WP_001443191.1 | glucose-1-phosphatase | - |
JLF32_RS23190 () | 4840668..4841555 | - | 888 | WP_001327311.1 | aldose 1-epimerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Escherichia coli Nissle 1917 | IS/Tn | TA47049 | NZ_CP007799 | 4503424..4504644 | 0.001 |