MGE detailed information
MGE type: Genomic_island MGE length: 10488 bp
Accession: NZ_AP022533 Location: 3952753..3963240 Organism: Escherichia coli strain THO-006 Replicon: chromosome
Accession: NZ_AP022533 Location: 3952753..3963240 Organism: Escherichia coli strain THO-006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF32_RS18970 () | 3948728..3949180 | + | 453 | WP_000682723.1 | hypothetical protein | - |
| JLF32_RS18975 () | 3949298..3949531 | + | 234 | WP_001213776.1 | DUF905 family protein | - |
| JLF32_RS18980 () | 3949631..3950452 | + | 822 | WP_001234359.1 | DUF945 domain-containing protein | - |
| JLF32_RS18985 () | 3950452..3950697 | + | 246 | WP_001164966.1 | hypothetical protein | - |
| JLF32_RS18990 () | 3950791..3951264 | + | 474 | WP_001313575.1 | antirestriction protein | - |
| JLF32_RS18995 () | 3951280..3951756 | + | 477 | WP_001313574.1 | RadC family protein | - |
| JLF32_RS19000 () | 3951819..3952040 | + | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| JLF32_RS19005 () | 3952059..3952703 | + | 645 | WP_000086761.1 | hypothetical protein | - |
| JLF32_RS19010 () | 3952753..3953127 | + | 375 | WP_001285481.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JLF32_RS19015 () | 3953174..3953551 | + | 378 | WP_000854730.1 | TA system toxin CbtA family protein | Toxin Detail |
| JLF32_RS19020 () | 3953548..3954040 | + | 493 | Protein_3728 | hypothetical protein | - |
| JLF32_RS19025 () | 3954119..3955107 | - | 989 | Protein_3729 | IS630 family transposase IS630 | Transposase |
| JLF32_RS19030 () | 3955255..3955443 | - | 189 | Protein_3730 | IS66 family transposase | - |
| JLF32_RS19035 () | 3955504..3956637 | + | 1134 | WP_000555401.1 | IS110 family transposase ISEc45 | Transposase |
| JLF32_RS19040 () | 3956891..3958295 | - | 1405 | Protein_3732 | IS66 family transposase ISEc47 | Transposase |
| JLF32_RS19045 () | 3958326..3958676 | - | 351 | WP_000624707.1 | IS66 family transposase IS682 | Transposase |
| JLF32_RS19050 () | 3958673..3958964 | - | 292 | Protein_3734 | IS66 family transposase ISEc43 | Transposase |
| JLF32_RS19055 () | 3959282..3960139 | + | 858 | Protein_3735 | DUF4942 domain-containing protein | - |
| JLF32_RS19065 () | 3960469..3961200 | - | 732 | WP_001308374.1 | DNA polymerase III subunit epsilon | - |
| JLF32_RS19070 () | 3961265..3961732 | + | 468 | WP_000917878.1 | ribonuclease HI | - |
| JLF32_RS19075 () | 3961729..3962451 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| JLF32_RS19080 () | 3962485..3963240 | + | 756 | WP_001052735.1 | hydroxyacylglutathione hydrolase | - |
| JLF32_RS19085 () | 3963312..3964670 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| JLF32_RS19090 () | 3964719..3965489 | - | 771 | WP_000211716.1 | class I SAM-dependent methyltransferase | - |
| JLF32_RS19095 () | 3965567..3966367 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| JLF32_RS19100 () | 3966608..3967522 | + | 915 | WP_000648563.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | Genomic island | TA47027 | NZ_CP007799 | 243683..255832 | 0.007 |