MGE detailed information
MGE type: Genomic_island MGE length: 65120 bp
Accession: NZ_AP022378 Location: 3855390..3920509 Organism: Citrobacter portucalensis strain IOMTU157 Replicon: chromosome
Accession: NZ_AP022378 Location: 3855390..3920509 Organism: Citrobacter portucalensis strain IOMTU157 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IOMTU157_RS18575 () | 3852201..3853184 | - | 984 | WP_164563073.1 | helix-turn-helix transcriptional regulator | - |
| IOMTU157_RS18580 () | 3853309..3854214 | - | 906 | WP_164563074.1 | LysR family transcriptional regulator | - |
| IOMTU157_RS18585 () | 3854324..3854953 | + | 630 | WP_063941265.1 | LysE family translocator | - |
| IOMTU157_RS18590 () | 3855055..3855291 | - | 237 | WP_003830891.1 | hypothetical protein | - |
| IOMTU157_RS18595 () | 3855390..3855893 | - | 504 | WP_164563326.1 | DUF2913 family protein | - |
| IOMTU157_RS18600 () | 3856004..3856701 | + | 698 | Protein_3650 | IS1 family transposase | - |
| IOMTU157_RS18605 () | 3856698..3857033 | + | 336 | Protein_3651 | GNAT family N-acetyltransferase | - |
| IOMTU157_RS18610 () | 3857202..3858206 | + | 1005 | WP_164563075.1 | LacI family DNA-binding transcriptional regulator | - |
| IOMTU157_RS18615 () | 3858360..3859811 | + | 1452 | WP_003830858.1 | Na+/H+ antiporter NhaC | - |
| IOMTU157_RS18620 () | 3859824..3861005 | + | 1182 | WP_003830857.1 | pyridoxal phosphate-dependent aminotransferase | - |
| IOMTU157_RS18625 () | 3861409..3861777 | - | 369 | WP_164563076.1 | TA system toxin CbtA family protein | Toxin Detail |
| IOMTU157_RS18630 () | 3861798..3862115 | - | 318 | WP_125289438.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IOMTU157_RS18635 () | 3862133..3862354 | - | 222 | WP_164563077.1 | DUF987 domain-containing protein | - |
| IOMTU157_RS18640 () | 3862363..3862839 | - | 477 | WP_164563078.1 | RadC family protein | - |
| IOMTU157_RS18645 () | 3862855..3863313 | - | 459 | WP_164563079.1 | antirestriction protein | - |
| IOMTU157_RS18650 () | 3863410..3863649 | - | 240 | WP_164563080.1 | DUF905 domain-containing protein | - |
| IOMTU157_RS18655 () | 3863727..3864199 | - | 473 | Protein_3661 | hypothetical protein | - |
| IOMTU157_RS18660 () | 3864221..3864916 | - | 696 | WP_164563081.1 | hypothetical protein | - |
| IOMTU157_RS18665 () | 3865099..3865800 | - | 702 | WP_130235807.1 | WYL domain-containing protein | - |
| IOMTU157_RS18670 () | 3866017..3866838 | - | 822 | WP_164563082.1 | DUF945 domain-containing protein | - |
| IOMTU157_RS18675 () | 3866932..3867795 | - | 864 | WP_135409544.1 | GTPase family protein | - |
| IOMTU157_RS18680 () | 3867856..3869040 | - | 1185 | WP_164563083.1 | hypothetical protein | - |
| IOMTU157_RS18685 () | 3869604..3870182 | + | 579 | WP_135409542.1 | inovirus-type Gp2 protein | - |
| IOMTU157_RS18690 () | 3870275..3870481 | + | 207 | WP_135409541.1 | AlpA family transcriptional regulator | - |
| IOMTU157_RS18695 () | 3870783..3871106 | + | 324 | WP_164563327.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| IOMTU157_RS18700 () | 3871108..3871821 | + | 714 | WP_079927716.1 | arsenical resistance protein ArsH | - |
| IOMTU157_RS18705 () | 3871830..3872375 | + | 546 | WP_164563084.1 | sigma-70 family RNA polymerase sigma factor | - |
| IOMTU157_RS18710 () | 3872451..3872813 | + | 363 | WP_164563085.1 | arsenic metallochaperone ArsD family protein | - |
| IOMTU157_RS18715 () | 3872840..3874591 | + | 1752 | WP_164563328.1 | arsenical pump-driving ATPase | - |
| IOMTU157_RS18720 () | 3874665..3875033 | - | 369 | WP_164563086.1 | LysR family transcriptional regulator | - |
| IOMTU157_RS18725 () | 3875096..3875908 | - | 813 | WP_164563087.1 | sulfite exporter TauE/SafE family protein | - |
| IOMTU157_RS18730 () | 3876058..3876489 | - | 432 | WP_164563088.1 | glutaredoxin-dependent arsenate reductase | - |
| IOMTU157_RS18735 () | 3876502..3877791 | - | 1290 | WP_164563089.1 | arsenite efflux transporter membrane subunit ArsB | - |
| IOMTU157_RS18740 () | 3877840..3879591 | - | 1752 | WP_164563090.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| IOMTU157_RS18745 () | 3879609..3879971 | - | 363 | WP_025760250.1 | arsenite efflux transporter metallochaperone ArsD | - |
| IOMTU157_RS18750 () | 3880019..3880369 | - | 351 | WP_025760251.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| IOMTU157_RS18755 () | 3880586..3882190 | + | 1605 | WP_164563091.1 | AAA family ATPase | - |
| IOMTU157_RS18760 () | 3882180..3883250 | + | 1071 | WP_164563092.1 | UvrD-helicase domain-containing protein | - |
| IOMTU157_RS18765 () | 3883252..3884190 | + | 939 | WP_164563093.1 | hypothetical protein | - |
| IOMTU157_RS18770 () | 3884264..3884794 | - | 531 | WP_052951379.1 | hypothetical protein | - |
| IOMTU157_RS18775 () | 3884975..3885991 | - | 1017 | WP_164563094.1 | glycosaminoglycan attachment site | - |
| IOMTU157_RS18780 () | 3886333..3887544 | - | 1212 | WP_047738129.1 | tyrosine-type recombinase/integrase | - |
| IOMTU157_RS18785 () | 3887939..3889246 | + | 1308 | WP_164563095.1 | integrase family protein | - |
| IOMTU157_RS18790 () | 3889369..3889818 | + | 450 | WP_032296090.1 | hypothetical protein | - |
| IOMTU157_RS18795 () | 3889815..3890036 | + | 222 | WP_003847740.1 | helix-turn-helix domain-containing protein | - |
| IOMTU157_RS18800 () | 3890171..3890934 | + | 764 | Protein_3690 | hypothetical protein | - |
| IOMTU157_RS18805 () | 3891396..3892016 | + | 621 | WP_003029579.1 | inovirus Gp2 family protein | - |
| IOMTU157_RS18810 () | 3892072..3892728 | - | 657 | WP_003029581.1 | hypothetical protein | - |
| IOMTU157_RS18815 () | 3892757..3893065 | - | 309 | WP_003029582.1 | maltose O-acetyltransferase | - |
| IOMTU157_RS18820 () | 3893575..3893745 | + | 171 | WP_077258089.1 | helix-turn-helix domain-containing protein | - |
| IOMTU157_RS18825 () | 3893974..3894897 | + | 924 | WP_003029584.1 | aminoimidazole riboside kinase | - |
| IOMTU157_RS18830 () | 3895063..3896580 | + | 1518 | WP_003029587.1 | carbohydrate porin | - |
| IOMTU157_RS18835 () | 3896718..3898088 | + | 1371 | WP_000345204.1 | sucrose-specific PTS transporter subunit IIBC | - |
| IOMTU157_RS18840 () | 3898088..3899488 | + | 1401 | WP_003029589.1 | sucrose-6-phosphate hydrolase | - |
| IOMTU157_RS18845 () | 3899518..3900522 | + | 1005 | WP_003029591.1 | LacI family DNA-binding transcriptional regulator | - |
| IOMTU157_RS18850 () | 3900697..3901292 | - | 596 | Protein_3700 | IS3 family transposase | - |
| IOMTU157_RS18855 () | 3901302..3902453 | - | 1152 | WP_003029596.1 | IS30-like element IS30 family transposase | - |
| IOMTU157_RS18860 () | 3902521..3902778 | - | 258 | Protein_3702 | IS3 family transposase | - |
| IOMTU157_RS18865 () | 3902850..3903923 | - | 1074 | Protein_3703 | DEAD/DEAH box helicase family protein | - |
| IOMTU157_RS18870 () | 3903923..3904828 | - | 906 | WP_032933065.1 | WYL domain-containing protein | - |
| IOMTU157_RS18875 () | 3905284..3906147 | + | 864 | WP_003029608.1 | GTPase family protein | - |
| IOMTU157_RS18880 () | 3906239..3907060 | + | 822 | WP_003029610.1 | DUF945 domain-containing protein | - |
| IOMTU157_RS18885 () | 3907277..3907978 | + | 702 | WP_003029611.1 | WYL domain-containing protein | - |
| IOMTU157_RS18890 () | 3908019..3908264 | + | 246 | WP_003029614.1 | hypothetical protein | - |
| IOMTU157_RS18895 () | 3908254..3908694 | + | 441 | WP_003029616.1 | hypothetical protein | - |
| IOMTU157_RS18900 () | 3908718..3909187 | + | 470 | Protein_3710 | hypothetical protein | - |
| IOMTU157_RS18905 () | 3909705..3910402 | + | 698 | Protein_3711 | IS1 family transposase | - |
| IOMTU157_RS18910 () | 3910559..3911836 | - | 1278 | WP_003036928.1 | DUF2254 domain-containing protein | - |
| IOMTU157_RS18915 () | 3911901..3913898 | - | 1998 | WP_016245729.1 | choline BCCT transporter BetT | - |
| IOMTU157_RS18920 () | 3914402..3914593 | + | 192 | Protein_3714 | DUF905 family protein | - |
| IOMTU157_RS18925 () | 3914607..3915068 | + | 462 | WP_003031344.1 | antirestriction protein | - |
| IOMTU157_RS18930 () | 3915084..3915560 | + | 477 | WP_003031345.1 | RadC family protein | - |
| IOMTU157_RS18935 () | 3915569..3915790 | + | 222 | WP_003031346.1 | DUF987 domain-containing protein | - |
| IOMTU157_RS18940 () | 3915808..3916125 | + | 318 | WP_003031347.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IOMTU157_RS18945 () | 3916146..3916487 | + | 342 | WP_003031349.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| IOMTU157_RS18955 () | 3917118..3917582 | - | 465 | WP_164563096.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| IOMTU157_RS18960 () | 3917848..3919296 | - | 1449 | WP_164563097.1 | EAL domain-containing protein | - |
| IOMTU157_RS18965 () | 3919814..3920509 | - | 696 | WP_126319144.1 | molecular chaperone | - |
| IOMTU157_RS18970 () | 3920506..3921804 | - | 1299 | Protein_3723 | fimbrial protein | - |
| IOMTU157_RS18975 () | 3921859..3922556 | + | 698 | Protein_3724 | IS1 family transposase | - |
| IOMTU157_RS18980 () | 3922570..3922899 | - | 330 | Protein_3725 | fimbrial protein | - |
| IOMTU157_RS18985 () | 3922904..3925396 | - | 2493 | WP_164563098.1 | CS1-pili formation C-terminal domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|