MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 99872 bp
Accession: NZ_AP021986 Location: 1..99872 Organism: Raoultella ornithinolytica strain WP3-W18-ESBL-06 Replicon: plasmid pWP3-W18-ESBL-06_3
Accession: NZ_AP021986 Location: 1..99872 Organism: Raoultella ornithinolytica strain WP3-W18-ESBL-06 Replicon: plasmid pWP3-W18-ESBL-06_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R89_RS28660 () | 101..1211 | + | 1111 | Protein_0 | IS3 family transposase ISShfr8 | Transposase |
| H7R89_RS28665 () | 1224..1499 | - | 276 | Protein_1 | carboxymuconolactone decarboxylase family protein | - |
| H7R89_RS28670 () | 1578..1738 | - | 161 | Protein_2 | IS3 family transposase | - |
| H7R89_RS28675 () | 2233..2973 | - | 741 | WP_011711659.1 | hypothetical protein | - |
| H7R89_RS28680 () | 2976..3911 | - | 936 | WP_002123001.1 | RCS-specific HTH-type transcriptional activator RclR | VF |
| H7R89_RS28685 () | 4034..4521 | + | 488 | Protein_5 | Peptide methionine sulfoxide reductase MsrA 3 | VF |
| H7R89_RS28690 () | 4525..4785 | + | 261 | WP_005403706.1 | glutaredoxin | - |
| H7R89_RS28695 () | 4817..5257 | + | 441 | WP_005403705.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| H7R89_RS28700 () | 5312..5557 | + | 246 | WP_011711656.1 | hypothetical protein | - |
| H7R89_RS28705 () | 5763..6425 | + | 663 | WP_001281573.1 | peptide-methionine (S)-S-oxide reductase | - |
| H7R89_RS28710 () | 6645..7622 | - | 978 | WP_002119794.1 | sensor domain-containing diguanylate cyclase | - |
| H7R89_RS28715 () | 8240..8509 | - | 270 | Protein_11 | hypothetical protein | - |
| H7R89_RS28720 () | 8584..9128 | + | 545 | Protein_12 | transposase | - |
| H7R89_RS28725 () | 9182..9885 | - | 704 | Protein_13 | IS6 family transposase IS15DI | Transposase |
| H7R89_RS28730 () | 9922..11361 | - | 1440 | WP_130979832.1 | FAD-dependent oxidoreductase | - |
| H7R89_RS28735 () | 11405..12265 | - | 861 | WP_008786828.1 | MBL fold metallo-hydrolase | - |
| H7R89_RS28740 () | 12423..12734 | + | 312 | WP_008786829.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| H7R89_RS28745 () | 12724..13152 | + | 429 | WP_020996151.1 | YeeE/YedE family protein | - |
| H7R89_RS28750 () | 13193..13624 | + | 432 | WP_008786831.1 | membrane protein | - |
| H7R89_RS28755 () | 13666..14463 | + | 798 | WP_008786832.1 | sulfite exporter TauE/SafE family protein | - |
| H7R89_RS28760 () | 14537..16006 | - | 1470 | WP_075912869.1 | diguanylate cyclase | - |
| H7R89_RS28765 () | 16020..16610 | - | 591 | WP_023165869.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| H7R89_RS28770 () | 16684..17388 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H7R89_RS28775 () | 17453..17848 | + | 396 | Protein_23 | IS30 family transposase IS30D | Transposase |
| H7R89_RS28780 () | 17858..18106 | - | 249 | Protein_24 | IS3 family transposase ISEhe3 | Transposase |
| H7R89_RS28785 () | 18461..19384 | + | 924 | WP_000992321.1 | aminoimidazole riboside kinase | - |
| H7R89_RS28790 () | 19550..21067 | + | 1518 | WP_003029587.1 | carbohydrate porin | - |
| H7R89_RS28795 () | 21205..22575 | + | 1371 | WP_000345204.1 | sucrose-specific PTS transporter subunit IIBC | - |
| H7R89_RS28800 () | 22575..23975 | + | 1401 | WP_003029589.1 | sucrose-6-phosphate hydrolase | - |
| H7R89_RS28805 () | 24005..25009 | + | 1005 | WP_003029591.1 | LacI family DNA-binding transcriptional regulator | - |
| H7R89_RS28810 () | 25232..25929 | - | 698 | Protein_30 | IS1 family transposase IS1R | Transposase |
| H7R89_RS28815 () | 25987..26541 | + | 555 | Protein_31 | IS110 family transposase IS4321R | Transposase |
| H7R89_RS28820 () | 26818..27081 | - | 264 | Protein_32 | SOS response-associated peptidase family protein | - |
| H7R89_RS28825 () | 27852..28457 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| H7R89_RS28830 () | 28552..31449 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| H7R89_RS28835 () | 31783..32175 | - | 393 | WP_004194114.1 | relaxosome protein TraM | - |
| H7R89_RS28840 () | 32607..33092 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| H7R89_RS28845 () | 33125..33454 | - | 330 | WP_011977736.1 | hypothetical protein | - |
| H7R89_RS28850 () | 33487..34308 | - | 822 | WP_032454971.1 | DUF945 domain-containing protein | - |
| H7R89_RS28855 () | 35132..35695 | - | 564 | WP_182952538.1 | methyltransferase | - |
| H7R89_RS28860 () | 35743..37098 | - | 1356 | WP_013054814.1 | DUF3560 domain-containing protein | - |
| H7R89_RS28865 () | 37150..37380 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| H7R89_RS28870 () | 37472..37699 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| H7R89_RS28875 () | 38379..38699 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| H7R89_RS28880 () | 38734..38988 | - | 255 | WP_182952539.1 | DNA polymerase III subunit theta | - |
| H7R89_RS28885 () | 39176..39367 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| H7R89_RS28890 () | 39410..39916 | - | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| H7R89_RS28895 () | 39959..40387 | - | 429 | WP_001568045.1 | antirestriction protein | - |
| H7R89_RS28900 () | 41068..41835 | - | 768 | WP_001568044.1 | hypothetical protein | - |
| H7R89_RS28905 () | 41889..42308 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| H7R89_RS28910 () | 42318..42539 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| H7R89_RS28915 () | 42539..43240 | - | 702 | WP_004152355.1 | DNA methylase | - |
| H7R89_RS28920 () | 43312..43514 | - | 203 | Protein_52 | hypothetical protein | - |
| H7R89_RS28925 () | 43677..43907 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| H7R89_RS28930 () | 43970..44641 | - | 672 | WP_001568039.1 | plasmid partitioning/stability family protein | - |
| H7R89_RS28935 () | 44644..45615 | - | 972 | WP_001568038.1 | hypothetical protein | - |
| H7R89_RS28940 () | 45849..46280 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H7R89_RS28945 () | 46280..47551 | + | 1272 | WP_182952540.1 | Y-family DNA polymerase | - |
| H7R89_RS28950 () | 47633..48607 | - | 975 | WP_021312406.1 | ParB/RepB/Spo0J family partition protein | - |
| H7R89_RS28955 () | 48607..49812 | - | 1206 | WP_009484138.1 | AAA family ATPase | - |
| H7R89_RS28960 () | 50227..50529 | + | 303 | Protein_60 | hypothetical protein | - |
| H7R89_RS28965 () | 50951..51706 | - | 756 | WP_001568031.1 | replication initiation protein RepE | - |
| H7R89_RS28970 () | 52337..52450 | + | 114 | WP_014343462.1 | hypothetical protein | - |
| H7R89_RS28975 () | 52579..52836 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| H7R89_RS28980 () | 52894..53673 | - | 780 | WP_001568028.1 | site-specific integrase | - |
| H7R89_RS28985 () | 53857..54834 | - | 978 | WP_182952533.1 | hypothetical protein | - |
| H7R89_RS28990 () | 55021..55326 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H7R89_RS28995 () | 55328..55546 | - | 219 | WP_004197642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| H7R89_RS29000 () | 56143..56373 | + | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| H7R89_RS29005 () | 56370..56786 | + | 417 | WP_032425563.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H7R89_RS29010 () | 56827..57705 | - | 879 | WP_009309916.1 | restriction endonuclease | - |
| H7R89_RS29015 () | 58367..59644 | + | 1278 | WP_009309915.1 | HlyD family secretion protein | - |
| H7R89_RS29020 () | 59634..61742 | + | 2109 | WP_032427226.1 | peptidase domain-containing ABC transporter | - |
| H7R89_RS29025 () | 61742..62368 | + | 627 | WP_182952534.1 | CPBP family intramembrane metalloprotease | - |
| H7R89_RS29030 () | 62394..63362 | - | 969 | WP_074091250.1 | IS5 family transposase IS903B | Transposase |
| H7R89_RS29035 () | 63645..64613 | + | 969 | WP_175818057.1 | IS5 family transposase IS903B | Transposase |
| H7R89_RS29040 () | 65162..65710 | + | 549 | WP_001567366.1 | thioredoxin fold domain-containing protein | - |
| H7R89_RS29045 () | 65757..66191 | + | 435 | WP_001567367.1 | cell envelope integrity protein TolA | - |
| H7R89_RS29050 () | 66481..67112 | + | 632 | Protein_78 | hypothetical protein | - |
| H7R89_RS29055 () | 67141..68544 | - | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| H7R89_RS29060 () | 68678..69454 | - | 777 | WP_060617172.1 | DUF2971 domain-containing protein | - |
| H7R89_RS29065 () | 69695..70018 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| H7R89_RS29070 () | 70195..73206 | - | 3012 | WP_047722714.1 | Tn3 family transposase ISEc63 | Transposase |
| H7R89_RS29075 () | 73367..73924 | + | 558 | WP_047722713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| H7R89_RS29080 () | 73941..74489 | + | 549 | WP_182952535.1 | DUF4231 domain-containing protein | - |
| H7R89_RS29085 () | 74528..75508 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| H7R89_RS29090 () | 75534..76004 | + | 471 | WP_182952536.1 | SLATT domain-containing protein | - |
| H7R89_RS29095 () | 76043..76447 | - | 405 | WP_071846040.1 | TIR domain-containing protein | - |
| H7R89_RS29100 () | 76621..77139 | + | 519 | Protein_88 | TetR/AcrR family transcriptional regulator | - |
| H7R89_RS29105 () | 77269..78027 | - | 759 | Protein_89 | IS5 family transposase ISSod6 | Transposase |
| H7R89_RS29110 () | 78219..78734 | - | 516 | WP_004911234.1 | DUF417 family protein | - |
| H7R89_RS29115 () | 78872..79426 | - | 555 | WP_000088799.1 | carboxymuconolactone decarboxylase family protein | - |
| H7R89_RS29120 () | 79569..79646 | - | 78 | Protein_92 | peptide-methionine (S)-S-oxide reductase | - |
| H7R89_RS29125 () | 79885..80022 | + | 138 | Protein_93 | IS4 family transposase | - |
| H7R89_RS29130 () | 80194..80565 | - | 372 | WP_049078381.1 | hypothetical protein | - |
| H7R89_RS29135 () | 80722..81996 | + | 1275 | WP_011191341.1 | IS4 family transposase ISApu2 | Transposase |
| H7R89_RS29140 () | 82751..83770 | + | 1020 | Protein_96 | hypothetical protein | - |
| H7R89_RS29145 () | 83787..84392 | - | 606 | Protein_97 | IS3 family transposase ISShfr8 | Transposase |
| H7R89_RS29150 () | 84424..85128 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H7R89_RS29155 () | 85510..86514 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| H7R89_RS29160 () | 86593..87150 | - | 558 | WP_182952537.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| H7R89_RS29165 () | 87144..87515 | - | 372 | WP_003100853.1 | hypothetical protein | - |
| H7R89_RS29170 () | 87512..88012 | - | 501 | WP_003100856.1 | hypothetical protein | - |
| H7R89_RS29175 () | 88009..88335 | - | 327 | WP_003100858.1 | hypothetical protein | - |
| H7R89_RS29180 () | 88590..88946 | - | 357 | WP_003465043.1 | cupin domain-containing protein | - |
| H7R89_RS29185 () | 88936..89337 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| H7R89_RS29190 () | 89334..89624 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| H7R89_RS29195 () | 89750..90454 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H7R89_RS29200 () | 90595..90798 | - | 204 | WP_004197808.1 | hemolysin expression modulator Hha | - |
| H7R89_RS29205 () | 90832..91200 | - | 369 | WP_095285133.1 | hypothetical protein | - |
| H7R89_RS29210 () | 91244..91738 | - | 495 | WP_020805591.1 | hypothetical protein | - |
| H7R89_RS29215 () | 91769..92341 | - | 573 | WP_020805590.1 | hypothetical protein | - |
| H7R89_RS29220 () | 92338..92586 | - | 249 | WP_000272716.1 | hypothetical protein | - |
| H7R89_RS29225 () | 92944..93294 | + | 351 | WP_021312576.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| H7R89_RS29230 () | 93344..93706 | + | 363 | WP_004152100.1 | arsenite efflux transporter metallochaperone ArsD | - |
| H7R89_RS29235 () | 93724..94059 | + | 336 | Protein_115 | Arsenical pump-driving ATPase | VF |
| H7R89_RS29240 () | 94108..94812 | - | 705 | WP_064357918.1 | IS6 family transposase IS26 | Transposase |
| H7R89_RS29245 () | 94877..94999 | - | 123 | Protein_117 | IS5 family transposase ISKpn26 | Transposase |
| H7R89_RS29250 () | 95652..95909 | - | 258 | WP_064343465.1 | hypothetical protein | - |
| H7R89_RS29255 () | 96532..97110 | - | 579 | Protein_119 | IS5 family transposase ISEc68 | Transposase |
| H7R89_RS29260 () | 97258..98238 | - | 981 | WP_016947617.1 | IS5 family transposase ISKpn26 | Transposase |
| H7R89_RS29265 () | 98516..98797 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| H7R89_RS29270 () | 98778..99107 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|