MGE detailed information
MGE type: Genomic_island MGE length: 50620 bp
Accession: NZ_AP021891 Location: 3559364..3609983 Organism: Escherichia coli strain 2017.01.04CC Replicon: chromosome
Accession: NZ_AP021891 Location: 3559364..3609983 Organism: Escherichia coli strain 2017.01.04CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VEGS_RS17150 () | 3555383..3556246 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| VEGS_RS17155 () | 3556338..3557159 | + | 822 | WP_023565123.1 | DUF945 domain-containing protein | - |
| VEGS_RS17160 () | 3557376..3558077 | + | 702 | WP_047649085.1 | WYL domain-containing protein | - |
| VEGS_RS17165 () | 3558118..3558354 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| VEGS_RS17170 () | 3558354..3558797 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| VEGS_RS17175 () | 3558820..3559287 | + | 468 | WP_001385283.1 | hypothetical protein | - |
| VEGS_RS17180 () | 3559364..3559603 | + | 240 | Protein_3360 | DUF905 domain-containing protein | - |
| VEGS_RS17185 () | 3559701..3560159 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| VEGS_RS17190 () | 3560175..3560651 | + | 477 | WP_000811693.1 | RadC family protein | - |
| VEGS_RS17195 () | 3560660..3560881 | + | 222 | WP_124038440.1 | DUF987 domain-containing protein | - |
| VEGS_RS17200 () | 3560900..3561217 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| VEGS_RS17205 () | 3561238..3561579 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| VEGS_RS17210 () | 3562123..3563400 | + | 1278 | WP_001269622.1 | hypothetical protein ; Integrase | Integrase |
| VEGS_RS17215 () | 3563482..3564195 | - | 714 | WP_000179449.1 | hypothetical protein | - |
| VEGS_RS17220 () | 3564230..3566068 | - | 1839 | WP_097477492.1 | hypothetical protein | - |
| VEGS_RS17225 () | 3566083..3566286 | - | 204 | WP_000452041.1 | hypothetical protein | - |
| VEGS_RS17230 () | 3566373..3567401 | - | 1029 | WP_172409736.1 | major capsid protein | - |
| VEGS_RS17235 () | 3567420..3567782 | - | 363 | WP_000582631.1 | hypothetical protein | - |
| VEGS_RS17240 () | 3567779..3567991 | - | 213 | WP_024233086.1 | hypothetical protein | - |
| VEGS_RS17245 () | 3568325..3568663 | - | 339 | WP_130238211.1 | hypothetical protein | - |
| VEGS_RS17250 () | 3568665..3569075 | - | 411 | WP_016159682.1 | hypothetical protein | - |
| VEGS_RS17255 () | 3569208..3569483 | - | 276 | WP_021513209.1 | hypothetical protein | - |
| VEGS_RS17260 () | 3569495..3570166 | - | 672 | WP_124783487.1 | helix-turn-helix domain-containing protein | - |
| VEGS_RS17265 () | 3570220..3570390 | - | 171 | WP_000005469.1 | hypothetical protein | - |
| VEGS_RS17270 () | 3570410..3570598 | - | 189 | WP_124783488.1 | hypothetical protein | - |
| VEGS_RS17275 () | 3572603..3573142 | + | 540 | WP_021562836.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| VEGS_RS17280 () | 3573695..3573847 | - | 153 | WP_000788776.1 | hypothetical protein | - |
| VEGS_RS17290 () | 3574590..3575663 | + | 1074 | WP_172409737.1 | hypothetical protein ; Integrase | Integrase |
| VEGS_RS17295 () | 3575681..3577081 | + | 1401 | WP_140017598.1 | hypothetical protein | - |
| VEGS_RS17300 () | 3577307..3577519 | - | 213 | WP_097734168.1 | hypothetical protein | - |
| VEGS_RS17305 () | 3577589..3578983 | - | 1395 | WP_140017597.1 | P-type conjugative transfer protein TrbL | - |
| VEGS_RS17310 () | 3578986..3579159 | - | 174 | WP_001575473.1 | hypothetical protein | - |
| VEGS_RS17315 () | 3579171..3579965 | - | 795 | WP_024046449.1 | P-type conjugative transfer protein TrbJ | - |
| VEGS_RS17320 () | 3580047..3580400 | - | 354 | WP_097734171.1 | conjugal transfer transcriptional regulator TraJ | - |
| VEGS_RS17330 () | 3581707..3581958 | + | 252 | WP_097734174.1 | HigA family addiction module antidote protein | - |
| VEGS_RS17335 () | 3582118..3582798 | - | 681 | WP_097734176.1 | hypothetical protein | - |
| VEGS_RS17340 () | 3582795..3583907 | - | 1113 | WP_097734177.1 | hypothetical protein | - |
| VEGS_RS17345 () | 3583904..3585022 | - | 1119 | WP_097734178.1 | hypothetical protein | - |
| VEGS_RS17355 () | 3585495..3586748 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| VEGS_RS17360 () | 3586760..3587863 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| VEGS_RS17365 () | 3588151..3589206 | + | 1056 | WP_124038439.1 | phosphoporin PhoE | - |
| VEGS_RS17370 () | 3589245..3589646 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| VEGS_RS17375 () | 3589704..3590948 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3590364..3590444 | - | 81 | NuclAT_11 | - | - |
| - () | 3590364..3590444 | - | 81 | NuclAT_11 | - | - |
| - () | 3590364..3590444 | - | 81 | NuclAT_11 | - | - |
| - () | 3590364..3590444 | - | 81 | NuclAT_11 | - | - |
| VEGS_RS17380 () | 3591040..3591498 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| VEGS_RS17385 () | 3591759..3593216 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| VEGS_RS17390 () | 3593273..3593794 | - | 522 | Protein_3399 | peptide chain release factor H | - |
| VEGS_RS17395 () | 3593793..3593996 | - | 204 | Protein_3400 | RNA ligase RtcB family protein | - |
| VEGS_RS17400 () | 3594242..3594694 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| VEGS_RS17405 () | 3594704..3595102 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| VEGS_RS17410 () | 3595105..3595398 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| VEGS_RS17415 () | 3595450..3596505 | - | 1056 | WP_124038438.1 | DNA polymerase IV | - |
| VEGS_RS17420 () | 3596576..3597361 | - | 786 | WP_000207587.1 | Chemotaxis protein LafU | VF |
| VEGS_RS17425 () | 3597333..3599045 | + | 1713 | Protein_3406 | Flagellar biosynthesis protein FlhA | VF |
| VEGS_RS17430 () | 3599269..3599766 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| VEGS_RS17435 () | 3599942..3600715 | - | 774 | WP_015675129.1 | Murein DD-endopeptidase MepH | VF |
| VEGS_RS17440 () | 3600901..3601161 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| VEGS_RS17445 () | 3601164..3601442 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| VEGS_RS17450 () | 3601598..3602338 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| VEGS_RS17455 () | 3602309..3603076 | - | 768 | WP_124038437.1 | class II glutamine amidotransferase | - |
| VEGS_RS17460 () | 3603282..3603860 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| VEGS_RS17465 () | 3604100..3606544 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| VEGS_RS17470 () | 3606587..3607033 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| VEGS_RS17475 () | 3607214..3607984 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| VEGS_RS17480 () | 3608025..3609161 | - | 1137 | WP_096151642.1 | ISAs1 family transposase ISEc1 | Transposase |
| VEGS_RS17485 () | 3609592..3609768 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| VEGS_RS17490 () | 3609765..3609983 | - | 219 | WP_001101841.1 | hypothetical protein | - |
| VEGS_RS17495 () | 3609961..3614187 | - | 4227 | WP_124038436.1 | RHS repeat protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|