MGE detailed information
MGE type: Genomic_island MGE length: 32464 bp
Accession: NZ_AP021879 Location: 421511..453974 Organism: Desulfosarcina ovata subsp. ovata strain oXyS1 Replicon: chromosome
Accession: NZ_AP021879 Location: 421511..453974 Organism: Desulfosarcina ovata subsp. ovata strain oXyS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
GN112_RS01965 () | 417002..417886 | + | 885 | WP_162458736.1 | branched-chain amino acid ABC transporter permease | - |
GN112_RS01970 () | 417910..418947 | + | 1038 | WP_197743237.1 | branched-chain amino acid ABC transporter permease | - |
GN112_RS01975 () | 418960..419688 | + | 729 | WP_155308684.1 | ABC transporter ATP-binding protein | - |
GN112_RS01980 () | 419675..420385 | + | 711 | WP_155308685.1 | ABC transporter ATP-binding protein | - |
GN112_RS01985 () | 420549..421340 | + | 792 | WP_155308686.1 | SDR family oxidoreductase UcpA | - |
GN112_RS01990 () | 421511..422572 | + | 1062 | WP_155308687.1 | TMAO reductase system periplasmic protein TorT | - |
GN112_RS01995 () | 422849..424330 | + | 1482 | WP_155308688.1 | sugar ABC transporter ATP-binding protein | - |
GN112_RS02000 () | 424356..425378 | + | 1023 | WP_155308689.1 | ABC transporter permease | - |
GN112_RS02005 () | 425375..426268 | + | 894 | WP_155308690.1 | ABC transporter permease | - |
GN112_RS02010 () | 426367..427761 | + | 1395 | WP_155308543.1 | IS66 family transposase | - |
GN112_RS02015 () | 427943..430015 | + | 2073 | WP_155308691.1 | hydantoinase/oxoprolinase family protein | - |
GN112_RS02020 () | 430032..431834 | + | 1803 | WP_155308692.1 | hydantoinase B/oxoprolinase family protein | - |
GN112_RS02025 () | 431857..432882 | + | 1026 | WP_155308693.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
GN112_RS02030 () | 432892..433251 | - | 360 | WP_155308694.1 | hypothetical protein | - |
GN112_RS02035 () | 433297..434484 | - | 1188 | WP_155308695.1 | 12,18-didecarboxysiroheme deacetylase | - |
GN112_RS02040 () | 434491..436275 | - | 1785 | WP_155308696.1 | AAA family ATPase | - |
GN112_RS02045 () | 436818..437792 | + | 975 | WP_155308697.1 | PHP domain-containing protein | - |
GN112_RS02050 () | 437999..438295 | - | 297 | WP_155308698.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
GN112_RS02055 () | 438292..438573 | - | 282 | WP_155308699.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
GN112_RS02060 () | 439466..439744 | + | 279 | WP_155308700.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
GN112_RS02065 () | 439762..440049 | + | 288 | WP_155308701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
GN112_RS02070 () | 441003..441836 | - | 834 | WP_155308702.1 | Retron-type reverse transcriptase | - |
GN112_RS02075 () | 441817..442833 | - | 1017 | WP_155308703.1 | CRISPR-associated endonuclease Cas1 | - |
GN112_RS02080 () | 442830..443159 | - | 330 | WP_162458737.1 | CRISPR-associated endonuclease Cas2 | - |
GN112_RS02085 () | 443209..443493 | - | 285 | WP_155308705.1 | CRISPR-associated endonuclease Cas2 | - |
GN112_RS02090 () | 443544..444092 | - | 549 | WP_155308706.1 | hypothetical protein | - |
GN112_RS02095 () | 444192..445268 | - | 1077 | WP_155308707.1 | hypothetical protein | - |
GN112_RS02100 () | 445408..446298 | - | 891 | WP_155308708.1 | hypothetical protein | - |
GN112_RS02105 () | 446279..446662 | - | 384 | WP_197743238.1 | CRISPR-associated protein Csx16 | - |
GN112_RS02110 () | 449493..451160 | - | 1668 | WP_155308709.1 | hypothetical protein | - |
GN112_RS02115 () | 451207..453477 | - | 2271 | WP_155308710.1 | TIGR03986 family CRISPR-associated RAMP protein | - |
GN112_RS02120 () | 453474..453974 | - | 501 | WP_155308711.1 | hypothetical protein | - |
GN112_RS02125 () | 453974..455413 | - | 1440 | WP_155308712.1 | hypothetical protein | - |
GN112_RS02130 () | 455410..456981 | - | 1572 | WP_155308713.1 | hypothetical protein | - |
GN112_RS02135 () | 456978..457640 | - | 663 | WP_155308714.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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