MGE detailed information
MGE type: Genomic_island MGE length: 63981 bp
Accession: NZ_AP021875 Location: 378487..442467 Organism: Desulfosarcina widdelii strain PP31 Replicon: chromosome
Accession: NZ_AP021875 Location: 378487..442467 Organism: Desulfosarcina widdelii strain PP31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GN111_RS01735 () | 373512..373898 | + | 387 | WP_155302095.1 | GxxExxY protein | - |
| GN111_RS01740 () | 374215..374460 | + | 246 | WP_155302096.1 | acyl carrier protein | - |
| GN111_RS01745 () | 374818..376410 | + | 1593 | WP_155302097.1 | acyl--CoA ligase | - |
| GN111_RS01750 () | 376646..378361 | + | 1716 | WP_155302098.1 | GDP-mannose dehydrogenase | - |
| GN111_RS01755 () | 378487..378780 | + | 294 | WP_155302099.1 | nucleotidyltransferase domain-containing protein | - |
| GN111_RS01760 () | 378777..379163 | + | 387 | WP_155302100.1 | HI0074 family nucleotidyltransferase substrate-binding subunit | - |
| GN111_RS01765 () | 379840..380220 | - | 381 | WP_155302101.1 | PIN domain-containing protein | - |
| GN111_RS01770 () | 380217..380414 | - | 198 | WP_155302102.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| GN111_RS01775 () | 380656..380844 | - | 189 | WP_155302103.1 | hypothetical protein | - |
| GN111_RS01780 () | 381411..381680 | + | 270 | WP_155302104.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| GN111_RS01785 () | 381680..381973 | + | 294 | WP_155302105.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GN111_RS01790 () | 382330..383667 | + | 1338 | WP_155302106.1 | MBL fold metallo-hydrolase | - |
| GN111_RS01795 () | 383826..384200 | + | 375 | WP_155302107.1 | GxxExxY protein | - |
| GN111_RS01800 () | 384597..384881 | - | 285 | WP_155302108.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GN111_RS01805 () | 384878..385147 | - | 270 | WP_155307882.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| GN111_RS01810 () | 385205..385732 | + | 528 | WP_197740480.1 | GxxExxY protein | - |
| GN111_RS01815 () | 386099..386329 | + | 231 | WP_155302109.1 | antitoxin | Antitoxin Detail |
| GN111_RS01820 () | 386326..386739 | + | 414 | WP_155302110.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GN111_RS01825 () | 387030..387326 | + | 297 | WP_155302111.1 | hypothetical protein | - |
| GN111_RS01830 () | 387295..387975 | + | 681 | WP_155302112.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| GN111_RS01835 () | 388779..388988 | + | 210 | WP_155302113.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| GN111_RS01840 () | 388975..389166 | + | 192 | WP_155302114.1 | type II toxin-antitoxin system HicA family toxin | - |
| GN111_RS01845 () | 389742..389996 | + | 255 | WP_155302115.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| GN111_RS01850 () | 390001..390396 | + | 396 | WP_170302082.1 | type II toxin-antitoxin system VapC family toxin | - |
| GN111_RS01855 () | 391292..392050 | + | 759 | WP_155302117.1 | hypothetical protein | - |
| GN111_RS01860 () | 392257..393123 | + | 867 | WP_155302118.1 | exosortase/archaeosortase family protein | - |
| GN111_RS01865 () | 393096..393749 | + | 654 | WP_155302119.1 | EpsI family protein | - |
| GN111_RS01870 () | 393954..395099 | + | 1146 | WP_155302120.1 | glycosyltransferase family 2 protein | - |
| GN111_RS01875 () | 395214..396149 | + | 936 | WP_155302121.1 | hypothetical protein | - |
| GN111_RS01880 () | 396170..397393 | + | 1224 | WP_155302122.1 | glycosyltransferase | - |
| GN111_RS01885 () | 397433..398011 | + | 579 | WP_155302123.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| GN111_RS01890 () | 398048..399160 | + | 1113 | WP_155302124.1 | glycosyltransferase | - |
| GN111_RS01895 () | 399169..401031 | + | 1863 | WP_155302125.1 | Amidophosphoribosyltransferase | VF |
| GN111_RS01900 () | 401201..402229 | + | 1029 | WP_155302126.1 | class I SAM-dependent methyltransferase | - |
| GN111_RS01905 () | 402354..403871 | + | 1518 | WP_155302127.1 | oligosaccharide flippase family protein | - |
| GN111_RS01910 () | 404221..405477 | + | 1257 | WP_155302128.1 | O-antigen ligase family protein | - |
| GN111_RS01915 () | 405726..406622 | + | 897 | WP_155302129.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| GN111_RS01920 () | 406801..407721 | + | 921 | WP_155302130.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| GN111_RS33615 () | 408008..408154 | + | 147 | WP_197740575.1 | GIY-YIG nuclease family protein | - |
| GN111_RS01930 () | 408437..408763 | - | 327 | WP_155307884.1 | transposase | - |
| GN111_RS01935 () | 408790..409143 | - | 354 | WP_155302131.1 | IS1595 family transposase ISPlba2 | Transposase |
| GN111_RS01940 () | 409241..410368 | + | 1128 | WP_155302132.1 | glycosyltransferase family 4 protein | - |
| GN111_RS01945 () | 410714..411589 | + | 876 | WP_155302133.1 | hypothetical protein | - |
| GN111_RS01950 () | 411771..412670 | + | 900 | WP_155302134.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| GN111_RS01955 () | 412978..413952 | + | 975 | WP_155302135.1 | hypothetical protein | - |
| GN111_RS01960 () | 414474..414608 | - | 135 | WP_155307885.1 | helix-turn-helix domain-containing protein | - |
| GN111_RS01965 () | 414879..415775 | + | 897 | WP_155302136.1 | hypothetical protein | - |
| GN111_RS01970 () | 415836..416846 | - | 1011 | WP_155302137.1 | hypothetical protein ; Integrase | Integrase |
| GN111_RS01975 () | 416869..417219 | - | 351 | WP_155302138.1 | IS481 family transposase ISMva2 | Transposase |
| GN111_RS01980 () | 417232..417540 | - | 309 | WP_155302139.1 | IS481 family transposase ISMva2 | Transposase |
| GN111_RS01985 () | 417764..418690 | - | 927 | Protein_390 | IS481 family transposase ISMva2 | Transposase |
| GN111_RS01990 () | 418879..420102 | + | 1224 | WP_155302140.1 | hypothetical protein | - |
| GN111_RS01995 () | 420732..421910 | + | 1179 | WP_155302141.1 | hypothetical protein | - |
| GN111_RS02000 () | 422435..423451 | - | 1017 | WP_155302142.1 | IS110 family transposase ISGsu4 | Transposase |
| GN111_RS02005 () | 424697..426079 | + | 1383 | WP_155302143.1 | IS4 family transposase ISPepr4 | Transposase |
| GN111_RS02010 () | 427039..427383 | - | 345 | WP_155302144.1 | IS110 family transposase ISShfr7 | Transposase |
| GN111_RS02015 () | 427829..428845 | - | 1017 | WP_155302142.1 | IS110 family transposase ISGsu4 | Transposase |
| GN111_RS02020 () | 429450..429794 | - | 345 | WP_155302145.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GN111_RS02025 () | 429788..430042 | - | 255 | WP_155302146.1 | hypothetical protein | - |
| GN111_RS02030 () | 430669..430893 | - | 225 | WP_155302147.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| GN111_RS02035 () | 430895..431287 | - | 393 | WP_155302148.1 | type II toxin-antitoxin system VapC family toxin | - |
| GN111_RS02040 () | 431755..431937 | + | 183 | WP_155302149.1 | type II toxin-antitoxin system HicA family toxin | - |
| GN111_RS02045 () | 431943..432161 | + | 219 | WP_155302150.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| GN111_RS02050 () | 432566..432886 | - | 321 | WP_155302151.1 | nucleotidyltransferase domain-containing protein | - |
| GN111_RS02055 () | 432865..433245 | - | 381 | WP_155302152.1 | HEPN domain-containing protein | - |
| GN111_RS02060 () | 433487..434266 | - | 780 | WP_155302153.1 | transposase | - |
| GN111_RS02065 () | 434367..434606 | - | 240 | WP_155302154.1 | DUF433 domain-containing protein | - |
| GN111_RS02070 () | 434945..435370 | - | 426 | WP_155302155.1 | PIN domain-containing protein | Toxin Detail |
| GN111_RS02075 () | 435357..435590 | - | 234 | WP_155302156.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GN111_RS02080 () | 435802..436203 | - | 402 | WP_155302157.1 | PIN domain-containing protein | - |
| GN111_RS02085 () | 436200..436493 | - | 294 | WP_155302158.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| GN111_RS02090 () | 436991..437917 | - | 927 | WP_155302159.1 | hypothetical protein | - |
| GN111_RS02095 () | 438140..438505 | - | 366 | WP_197740481.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| GN111_RS02100 () | 438495..438743 | - | 249 | WP_155302160.1 | hypothetical protein | - |
| GN111_RS02105 () | 439046..439921 | + | 876 | WP_155302161.1 | Bifunctional protein GlmU | VF |
| GN111_RS33500 () | 439902..440333 | - | 432 | WP_176603277.1 | hypothetical protein | - |
| GN111_RS02115 () | 441131..441694 | + | 564 | WP_155302162.1 | hypothetical protein | VF |
| GN111_RS02120 () | 442613..443491 | + | 879 | WP_155302163.1 | dTDP-4-dehydrorhamnose reductase | - |
| GN111_RS02125 () | 443936..445024 | + | 1089 | WP_155302164.1 | dTDP-glucose 4,6-dehydratase | - |
| GN111_RS02130 () | 446209..447306 | + | 1098 | WP_155302165.1 | VanZ family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|