MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_AP019856 Location: 4465602..4474953 Organism: Escherichia coli O8:H8 strain 16F5M1D1 Replicon: chromosome
Accession: NZ_AP019856 Location: 4465602..4474953 Organism: Escherichia coli O8:H8 strain 16F5M1D1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EcoO8H8_RS21150 () | 4462333..4463052 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| EcoO8H8_RS21155 () | 4463049..4464680 | - | 1632 | WP_096307062.1 | sensor histidine kinase | - |
| EcoO8H8_RS21160 () | 4464861..4465091 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| EcoO8H8_RS21165 () | 4465103..4465375 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| EcoO8H8_RS21170 () | 4465602..4465898 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| EcoO8H8_RS21175 () | 4465926..4466099 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| EcoO8H8_RS21180 () | 4466218..4467735 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| EcoO8H8_RS21185 () | 4467972..4469429 | - | 1458 | WP_000856832.1 | dipeptide/tripeptide permease DtpC | - |
| EcoO8H8_RS21190 () | 4469488..4471635 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| EcoO8H8_RS21195 () | 4471715..4473049 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| EcoO8H8_RS21200 () | 4473415..4474953 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| EcoO8H8_RS21210 () | 4475752..4476327 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| EcoO8H8_RS21215 () | 4476364..4478061 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| EcoO8H8_RS21220 () | 4478037..4478375 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| EcoO8H8_RS21225 () | 4478491..4479792 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |