MGE detailed information
MGE type: Prophage MGE length: 74136 bp
Accession: NZ_AP019305 Location: 115284..189419 Organism: Staphylococcus aureus strain TUM9458 Replicon: chromosome
Accession: NZ_AP019305 Location: 115284..189419 Organism: Staphylococcus aureus strain TUM9458 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKM72_RS00425 () | 111553..112932 | - | 1380 | WP_042109065.1 | ATP-dependent DNA helicase | - |
| EKM72_RS00430 () | 112922..113875 | - | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| EKM72_RS00435 () | 113983..114231 | + | 249 | WP_001151997.1 | ferredoxin | - |
| EKM72_RS00440 () | 114337..114882 | - | 546 | WP_125571235.1 | ECF transporter S component | - |
| EKM72_RS00445 () | 115284..116240 | - | 957 | WP_000913243.1 | DUF1672 domain-containing protein | - |
| EKM72_RS15870 () | 116294..116699 | - | 406 | Protein_84 | hypothetical protein | - |
| EKM72_RS00455 () | 116711..117607 | - | 897 | WP_125571237.1 | DUF1672 domain-containing protein | - |
| EKM72_RS00460 () | 117665..118570 | - | 906 | WP_125571239.1 | DUF1672 domain-containing protein | - |
| EKM72_RS00465 () | 118660..118875 | - | 216 | WP_000126130.1 | hypothetical protein | - |
| EKM72_RS00480 () | 119597..121051 | - | 1455 | WP_000909213.1 | N-acetylmuramoyl-L-alanine amidase | - |
| EKM72_RS00485 () | 121062..121364 | - | 303 | WP_000339146.1 | phage holin | - |
| EKM72_RS00490 () | 121500..121799 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| EKM72_RS00495 () | 121845..122009 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| EKM72_RS00500 () | 122002..122391 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| EKM72_RS00505 () | 122391..123857 | - | 1467 | WP_031775920.1 | BppU family phage baseplate upper protein | - |
| EKM72_RS00510 () | 123857..125767 | - | 1911 | WP_044425964.1 | hypothetical protein | - |
| EKM72_RS00515 () | 125783..126073 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| EKM72_RS00520 () | 126073..127656 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| EKM72_RS00525 () | 127665..128489 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| EKM72_RS00530 () | 128489..134689 | - | 6201 | WP_031860857.1 | phage tail tape measure protein | - |
| EKM72_RS00535 () | 134703..134861 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| EKM72_RS00540 () | 134912..135253 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| EKM72_RS00545 () | 135311..135766 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| EKM72_RS00550 () | 135858..136499 | - | 642 | WP_000807536.1 | tail protein | - |
| EKM72_RS00555 () | 136534..136929 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| EKM72_RS00560 () | 136930..137331 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| EKM72_RS00565 () | 137328..137660 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| EKM72_RS00570 () | 137672..137950 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| EKM72_RS00575 () | 138019..139182 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| EKM72_RS00580 () | 139194..139967 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| EKM72_RS00585 () | 139951..141189 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| EKM72_RS00590 () | 141194..142885 | - | 1692 | WP_000152858.1 | terminase large subunit | - |
| EKM72_RS00595 () | 142875..143180 | - | 306 | WP_000778935.1 | P27 family phage terminase small subunit | - |
| EKM72_RS00600 () | 143305..143625 | - | 321 | WP_000596031.1 | HNH endonuclease | - |
| EKM72_RS00605 () | 143782..144219 | - | 438 | WP_000513704.1 | transcriptional regulator | - |
| EKM72_RS00610 () | 144232..145599 | - | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| EKM72_RS00615 () | 145580..145870 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| EKM72_RS00620 () | 146004..146102 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| EKM72_RS00625 () | 146211..148658 | - | 2448 | WP_000884870.1 | virulence-associated E family protein | - |
| EKM72_RS00635 () | 148946..149146 | - | 201 | WP_000265252.1 | DUF1514 family protein | - |
| EKM72_RS00640 () | 149214..149366 | - | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| EKM72_RS00645 () | 149363..149569 | - | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
| EKM72_RS00650 () | 149606..150139 | - | 534 | WP_063653166.1 | dUTP diphosphatase | - |
| EKM72_RS15805 () | 150154..150315 | - | 162 | WP_000889684.1 | hypothetical protein | - |
| EKM72_RS15810 () | 150316..150489 | - | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| EKM72_RS00655 () | 150479..150730 | - | 252 | WP_031267622.1 | DUF1024 family protein | Toxin Detail |
| EKM72_RS00660 () | 150723..151030 | - | 308 | Protein_125 | hypothetical protein | - |
| EKM72_RS00665 () | 151027..151374 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| EKM72_RS00670 () | 151371..151751 | - | 381 | WP_001668982.1 | hypothetical protein | - |
| EKM72_RS00675 () | 151754..151960 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| EKM72_RS00680 () | 151974..152222 | - | 249 | WP_060474161.1 | hypothetical protein | - |
| EKM72_RS00685 () | 152222..152476 | - | 255 | WP_000022722.1 | DUF3310 domain-containing protein | - |
| EKM72_RS00690 () | 152473..152877 | - | 405 | WP_044426014.1 | phage DNA polymerase | - |
| EKM72_RS00695 () | 152877..153062 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| EKM72_RS00700 () | 153075..155027 | - | 1953 | WP_125571407.1 | DNA polymerase | - |
| EKM72_RS00705 () | 155095..155652 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| EKM72_RS00710 () | 155678..156844 | - | 1167 | WP_000762525.1 | DUF2800 domain-containing protein | - |
| EKM72_RS00715 () | 156841..157203 | - | 363 | WP_000279445.1 | hypothetical protein | - |
| EKM72_RS00720 () | 157218..157541 | - | 324 | WP_000174995.1 | hypothetical protein | - |
| EKM72_RS00725 () | 157620..157781 | - | 162 | WP_015986189.1 | DUF1270 family protein | - |
| EKM72_RS00730 () | 157793..158056 | - | 264 | WP_044426023.1 | helix-turn-helix domain-containing protein | - |
| EKM72_RS00735 () | 158081..158296 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| EKM72_RS00740 () | 158351..158716 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| EKM72_RS00745 () | 158685..158930 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| EKM72_RS00750 () | 158986..159195 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| EKM72_RS00755 () | 159185..159328 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| EKM72_RS00760 () | 159343..159786 | - | 444 | WP_000435360.1 | hypothetical protein | - |
| EKM72_RS00765 () | 159804..160028 | - | 225 | WP_063653167.1 | DUF739 family protein | - |
| EKM72_RS00770 () | 160190..160570 | + | 381 | WP_001089477.1 | helix-turn-helix domain-containing protein | - |
| EKM72_RS00775 () | 160592..161050 | + | 459 | WP_001558059.1 | hypothetical protein | - |
| EKM72_RS00780 () | 161068..161389 | + | 322 | Protein_149 | hypothetical protein | - |
| EKM72_RS00785 () | 161418..161813 | + | 396 | WP_000449655.1 | hypothetical protein | - |
| EKM72_RS00790 () | 161903..162049 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| EKM72_RS00795 () | 162046..162660 | - | 615 | WP_000191464.1 | hypothetical protein | - |
| EKM72_RS00800 () | 162786..163991 | + | 1206 | WP_031864865.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| EKM72_RS15770 () | 164034..164180 | - | 147 | WP_153227539.1 | hypothetical protein | - |
| EKM72_RS00805 () | 164288..165247 | + | 960 | WP_002303350.1 | IS30 family transposase IS1062 | Transposase |
| EKM72_RS00810 () | 165211..167127 | - | 1917 | WP_125571241.1 | hypothetical protein | - |
| EKM72_RS00815 () | 167120..168046 | - | 927 | WP_001557355.1 | DUF1672 domain-containing protein | - |
| EKM72_RS00820 () | 168290..170041 | - | 1752 | WP_000987774.1 | two-component system sensor histidine kinase SrrB | - |
| EKM72_RS00825 () | 170022..170747 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| EKM72_RS00830 () | 170880..171617 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| EKM72_RS00835 () | 171610..172152 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| EKM72_RS00840 () | 172145..172876 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| EKM72_RS00845 () | 172968..173474 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| EKM72_RS00850 () | 173552..174439 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EKM72_RS00855 () | 174488..174937 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| EKM72_RS00860 () | 175042..175584 | - | 543 | WP_000365240.1 | NUDIX hydrolase | - |
| EKM72_RS00865 () | 175666..176574 | + | 909 | WP_125571243.1 | aldo/keto reductase | - |
| EKM72_RS00870 () | 176790..177038 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| EKM72_RS00875 () | 177054..177809 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| EKM72_RS00880 () | 177951..178766 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| EKM72_RS00885 () | 178869..179789 | - | 921 | WP_000454063.1 | ribonuclease Z | - |
| EKM72_RS00890 () | 180102..181586 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| EKM72_RS00895 () | 181816..182682 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| EKM72_RS00900 () | 182764..184413 | - | 1650 | WP_001041915.1 | alpha-glucosidase | - |
| EKM72_RS00905 () | 184429..185448 | - | 1020 | WP_000256319.1 | HTH-type transcriptional regulator MalR | VF |
| EKM72_RS00910 () | 185449..185703 | - | 255 | WP_001792107.1 | hypothetical protein | - |
| EKM72_RS00915 () | 185642..186013 | - | 372 | WP_000413436.1 | VOC family protein | - |
| EKM72_RS00920 () | 186480..187697 | - | 1218 | WP_000122710.1 | MFS transporter | - |
| EKM72_RS00925 () | 188013..189419 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| EKM72_RS00930 () | 189487..190620 | - | 1134 | WP_000606693.1 | tripeptidase T | - |
| EKM72_RS00935 () | 190883..191062 | + | 180 | WP_001789875.1 | stressosome-associated protein Prli42 | - |
| EKM72_RS00940 () | 191189..192169 | - | 981 | WP_000916196.1 | aromatic acid exporter family protein | - |
| EKM72_RS00945 () | 192183..192620 | - | 438 | WP_000367419.1 | BrxA/BrxB family bacilliredoxin | - |
| EKM72_RS00950 () | 192971..194245 | - | 1275 | WP_000406838.1 | 2-oxo acid dehydrogenase subunit E2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|