MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 55930 bp
Accession: NZ_AP018937 Location: 1036998..1092927 Organism: Streptococcus pneumoniae strain HU-OH Replicon: chromosome
Accession: NZ_AP018937 Location: 1036998..1092927 Organism: Streptococcus pneumoniae strain HU-OH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL271_RS05545 () | 1033780..1036593 | + | 2814 | WP_000653460.1 | CHAP domain-containing protein | - |
| EL271_RS05555 () | 1036998..1038215 | - | 1218 | WP_001291561.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| EL271_RS05560 () | 1038297..1038500 | - | 204 | WP_000814511.1 | excisionase | - |
| EL271_RS05570 () | 1038961..1039191 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| EL271_RS05575 () | 1039188..1039610 | - | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| EL271_RS05585 () | 1040115..1040336 | + | 222 | Protein_1041 | helix-turn-helix transcriptional regulator | - |
| EL271_RS05590 () | 1040410..1043328 | - | 2919 | WP_001240982.1 | Tn3 family transposase Tn4430 | Transposase |
| EL271_RS05595 () | 1043332..1043886 | - | 555 | WP_000576156.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| EL271_RS05605 () | 1044241..1044978 | - | 738 | WP_001038790.1 | rRNA adenine N-6-methyltransferase | ARG |
| EL271_RS05610 () | 1045103..1045186 | - | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| EL271_RS05615 () | 1045420..1045557 | + | 138 | Protein_1046 | XRE family transcriptional regulator | - |
| EL271_RS05620 () | 1045617..1045784 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| EL271_RS05625 () | 1045903..1047822 | - | 1920 | WP_000691731.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| EL271_RS05630 () | 1047838..1047954 | - | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| EL271_RS05635 () | 1048199..1049134 | - | 936 | WP_001224320.1 | conjugal transfer protein | - |
| EL271_RS05640 () | 1049131..1050132 | - | 1002 | WP_000769867.1 | putative endopeptidase p60 | VF |
| EL271_RS05645 () | 1050129..1052306 | - | 2178 | WP_006146375.1 | membrane protein | - |
| EL271_RS05650 () | 1052309..1054756 | - | 2448 | WP_000331150.1 | ATP-binding protein | - |
| EL271_RS05655 () | 1054740..1055246 | - | 507 | WP_000506270.1 | conjugal transfer protein | - |
| EL271_RS05660 () | 1055221..1055718 | - | 498 | WP_000342538.1 | antirestriction protein ArdA | - |
| EL271_RS05665 () | 1055835..1056056 | - | 222 | WP_001009056.1 | hypothetical protein | - |
| EL271_RS05670 () | 1056099..1057303 | - | 1205 | Protein_1057 | replication initiation factor domain-containing protein | - |
| EL271_RS05675 () | 1057326..1057478 | - | 153 | WP_000879507.1 | hypothetical protein | - |
| EL271_RS05680 () | 1057481..1058866 | - | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| EL271_RS05685 () | 1058895..1059281 | - | 387 | WP_000985015.1 | YdcP family protein | - |
| EL271_RS05690 () | 1059297..1059611 | - | 315 | WP_000420682.1 | YdcP family protein | - |
| EL271_RS05700 () | 1060488..1060898 | + | 411 | WP_000387512.1 | thrombospondin type 3 repeat-containing protein | - |
| EL271_RS05705 () | 1060946..1067164 | + | 6219 | WP_171965428.1 | DEAD/DEAH box helicase family protein | - |
| EL271_RS05710 () | 1067239..1067523 | + | 285 | WP_000969645.1 | hypothetical protein | - |
| EL271_RS05715 () | 1067537..1067832 | + | 296 | Protein_1065 | hypothetical protein | - |
| EL271_RS05720 () | 1067846..1068043 | - | 198 | WP_074187117.1 | hypothetical protein | - |
| EL271_RS05725 () | 1068178..1068819 | + | 642 | WP_000933078.1 | hypothetical protein | - |
| EL271_RS05730 () | 1068829..1069914 | + | 1086 | WP_000401904.1 | toprim domain-containing protein | - |
| EL271_RS05735 () | 1069965..1070198 | + | 234 | WP_061746195.1 | hypothetical protein | - |
| EL271_RS05740 () | 1070195..1070578 | + | 384 | WP_000159213.1 | hypothetical protein | - |
| EL271_RS05745 () | 1070616..1070888 | + | 273 | WP_000495438.1 | hypothetical protein | - |
| EL271_RS05750 () | 1070956..1071432 | + | 477 | WP_000579617.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EL271_RS05755 () | 1071432..1072190 | + | 759 | WP_000354294.1 | zeta toxin family protein | Toxin Detail |
| EL271_RS05760 () | 1072666..1073454 | + | 789 | WP_000214003.1 | hypothetical protein | - |
| EL271_RS05765 () | 1073693..1073941 | + | 249 | WP_001814254.1 | hypothetical protein | - |
| EL271_RS05770 () | 1074112..1074831 | + | 720 | Protein_1076 | Chloramphenicol acetyltransferase | ARG |
| EL271_RS05780 () | 1075627..1076547 | - | 921 | WP_029658194.1 | protein rep | - |
| EL271_RS05790 () | 1076674..1077504 | + | 831 | Protein_1078 | alpha-glycosidase | - |
| EL271_RS05795 () | 1077772..1078227 | + | 456 | WP_025173603.1 | hypothetical protein | - |
| EL271_RS05800 () | 1078503..1078979 | + | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EL271_RS05805 () | 1078979..1079749 | + | 771 | WP_000405354.1 | zeta toxin family protein | Toxin Detail |
| EL271_RS05810 () | 1080005..1080688 | + | 684 | WP_000492698.1 | LexA family transcriptional regulator | - |
| EL271_RS05815 () | 1080691..1082106 | + | 1416 | WP_000118333.1 | Y-family DNA polymerase | - |
| EL271_RS05820 () | 1082103..1082468 | + | 366 | WP_000981955.1 | hypothetical protein | - |
| EL271_RS05825 () | 1082458..1082748 | + | 291 | WP_001080184.1 | hypothetical protein | - |
| EL271_RS05830 () | 1083043..1083399 | + | 357 | WP_000827835.1 | hypothetical protein | - |
| EL271_RS05835 () | 1083404..1083769 | + | 366 | WP_000401236.1 | plasmid mobilization relaxosome protein MobC | - |
| EL271_RS05840 () | 1083756..1085585 | + | 1830 | WP_000237134.1 | relaxase/mobilization nuclease domain-containing protein | - |
| EL271_RS05845 () | 1085689..1085916 | + | 228 | WP_000919632.1 | helix-turn-helix domain-containing protein | - |
| EL271_RS05850 () | 1086183..1086416 | + | 234 | WP_001022845.1 | hypothetical protein | - |
| EL271_RS05855 () | 1086501..1088009 | + | 1509 | WP_000291923.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| EL271_RS05860 () | 1088090..1088941 | + | 852 | WP_000201299.1 | Ribosome biogenesis GTPase A | VF |
| EL271_RS05865 () | 1088928..1089707 | + | 780 | WP_000201141.1 | ribonuclease HII | - |
| EL271_RS05870 () | 1089723..1091273 | + | 1551 | WP_000392557.1 | ClC family H(+)/Cl(-) exchange transporter | - |
| EL271_RS05875 () | 1091857..1092927 | + | 1071 | WP_000817890.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| EL271_RS05880 () | 1092992..1093981 | - | 990 | WP_000873993.1 | lipoate--protein ligase | - |
| EL271_RS05885 () | 1094045..1095730 | - | 1686 | WP_172954463.1 | dihydrolipoyl dehydrogenase | - |
| EL271_RS05890 () | 1095794..1096837 | - | 1044 | WP_000752696.1 | dihydrolipoamide acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|