MGE detailed information
MGE type: Prophage MGE length: 59287 bp
Accession: NZ_AP018923 Location: 2087432..2146718 Organism: Staphylococcus aureus strain JMUB3031 Replicon: chromosome
Accession: NZ_AP018923 Location: 2087432..2146718 Organism: Staphylococcus aureus strain JMUB3031 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5070_RS10805 () | 2082892..2083572 | - | 681 | WP_000645726.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| D5070_RS10810 () | 2083573..2084469 | - | 897 | WP_000991301.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| D5070_RS10815 () | 2084466..2084846 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| D5070_RS10820 () | 2085105..2085281 | - | 177 | WP_000681968.1 | hypothetical protein | - |
| D5070_RS10825 () | 2085524..2085622 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| D5070_RS10830 () | 2085822..2087108 | + | 1287 | WP_117218898.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| D5070_RS10835 () | 2087432..2087746 | - | 315 | Protein_1996 | hypothetical protein | VF |
| D5070_RS10840 () | 2087733..2089481 | - | 1749 | WP_001792928.1 | hypothetical protein | VF |
| D5070_RS10845 () | 2089867..2090117 | + | 251 | Protein_1998 | hypothetical protein | VF |
| D5070_RS10850 () | 2090439..2090618 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| D5070_RS10860 () | 2090929..2091189 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| D5070_RS10865 () | 2091242..2091592 | - | 351 | WP_000702263.1 | hypothetical protein | VF |
| D5070_RS10870 () | 2092104..2092439 | - | 336 | Protein_2002 | SH3 domain-containing protein | - |
| D5070_RS10890 () | 2093090..2093581 | - | 492 | WP_000920038.1 | hypothetical protein | VF |
| D5070_RS10895 () | 2093772..2094527 | - | 756 | WP_119305755.1 | CHAP domain-containing protein | - |
| D5070_RS10900 () | 2094539..2094793 | - | 255 | WP_000611512.1 | phage holin | - |
| D5070_RS10905 () | 2094841..2094948 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2094870..2095009 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2094870..2095009 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2094870..2095009 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2094870..2095009 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| D5070_RS10910 () | 2095001..2095177 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| D5070_RS10915 () | 2095286..2096059 | - | 774 | WP_000750412.1 | hypothetical protein | VF |
| D5070_RS10920 () | 2096432..2096806 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| D5070_RS10925 () | 2096862..2097149 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| D5070_RS10930 () | 2097195..2097347 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| D5070_RS10935 () | 2097340..2101122 | - | 3783 | WP_117219101.1 | hypothetical protein | - |
| D5070_RS10940 () | 2101138..2102628 | - | 1491 | WP_001154317.1 | phage tail family protein | - |
| D5070_RS10945 () | 2102628..2107277 | - | 4650 | WP_001133533.1 | phage tail tape measure protein | - |
| D5070_RS10950 () | 2107333..2107455 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| D5070_RS10955 () | 2107515..2107961 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| D5070_RS10960 () | 2108026..2108979 | - | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| D5070_RS10965 () | 2108980..2109360 | - | 381 | WP_000611454.1 | hypothetical protein | - |
| D5070_RS10970 () | 2109357..2109734 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| D5070_RS10975 () | 2109734..2110069 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| D5070_RS10980 () | 2110056..2110388 | - | 333 | WP_001177483.1 | head-tail connector protein | - |
| D5070_RS10985 () | 2110397..2110555 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| D5070_RS10990 () | 2110591..2111838 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| D5070_RS10995 () | 2111926..2112510 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| D5070_RS11000 () | 2112503..2113753 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| D5070_RS11005 () | 2113759..2113959 | - | 201 | WP_000365299.1 | hypothetical protein | - |
| D5070_RS11010 () | 2113973..2115667 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| D5070_RS11015 () | 2115670..2116137 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| D5070_RS11020 () | 2116266..2116610 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| D5070_RS11025 () | 2116626..2117078 | - | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| D5070_RS11030 () | 2117193..2117663 | - | 471 | WP_000282755.1 | hypothetical protein | - |
| D5070_RS11040 () | 2117686..2117886 | - | 201 | WP_001570807.1 | DUF1514 family protein | - |
| D5070_RS11045 () | 2117886..2118536 | - | 651 | WP_001005262.1 | hypothetical protein | - |
| D5070_RS11050 () | 2118695..2118844 | - | 150 | WP_119305757.1 | transcriptional regulator | - |
| D5070_RS15165 () | 2118841..2118936 | - | 96 | Protein_2035 | DUF1381 domain-containing protein | - |
| D5070_RS11055 () | 2118921..2119172 | - | 252 | Protein_2036 | hypothetical protein | - |
| D5070_RS11060 () | 2119185..2119589 | - | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| D5070_RS11065 () | 2119598..2119816 | - | 219 | WP_000338527.1 | hypothetical protein | - |
| D5070_RS11070 () | 2119823..2120704 | - | 882 | WP_119305759.1 | DnaD domain-containing protein | - |
| D5070_RS11075 () | 2120734..2121204 | - | 471 | WP_000934765.1 | single-stranded DNA-binding protein | - |
| D5070_RS11080 () | 2121205..2121822 | - | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| D5070_RS11085 () | 2121903..2122823 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| D5070_RS11090 () | 2122825..2124780 | - | 1956 | WP_064138715.1 | AAA family ATPase | - |
| D5070_RS11095 () | 2124777..2125040 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| D5070_RS11100 () | 2125049..2125309 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| D5070_RS11105 () | 2125402..2125563 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| D5070_RS11110 () | 2125560..2125880 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| D5070_RS11115 () | 2125939..2126571 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| D5070_RS11120 () | 2126586..2126726 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| D5070_RS11125 () | 2126757..2126954 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| D5070_RS11130 () | 2126970..2127719 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| D5070_RS11135 () | 2127776..2128315 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| D5070_RS11140 () | 2128339..2128599 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| D5070_RS11145 () | 2128617..2128841 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| D5070_RS11150 () | 2129000..2129770 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| D5070_RS11155 () | 2129966..2130694 | + | 729 | WP_001033320.1 | hypothetical protein | VF |
| D5070_RS11160 () | 2130718..2131446 | + | 729 | WP_000733771.1 | hypothetical protein | VF |
| D5070_RS11165 () | 2131530..2132567 | + | 1038 | WP_000857182.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| D5070_RS11170 () | 2132618..2133448 | + | 831 | Protein_2059 | hypothetical protein | VF |
| D5070_RS11175 () | 2133686..2134702 | - | 1017 | WP_000595401.1 | hypothetical protein | VF |
| D5070_RS11180 () | 2134724..2135776 | - | 1053 | WP_000791417.1 | hypothetical protein | VF |
| D5070_RS11185 () | 2136212..2137435 | + | 1224 | WP_000206623.1 | ArgE/DapE family deacylase | - |
| D5070_RS11190 () | 2137807..2138652 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| D5070_RS11195 () | 2138714..2139625 | - | 912 | WP_000825510.1 | hypothetical protein | VF |
| D5070_RS11200 () | 2139786..2141093 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| D5070_RS11210 () | 2141938..2142381 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| D5070_RS11215 () | 2142487..2142924 | - | 438 | WP_072419900.1 | hypothetical protein | - |
| D5070_RS11220 () | 2143241..2143831 | - | 591 | WP_001293059.1 | terminase small subunit | - |
| D5070_RS11225 () | 2143828..2144040 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| D5070_RS11230 () | 2144101..2144647 | + | 547 | Protein_2070 | site-specific integrase | - |
| D5070_RS11235 () | 2144742..2146358 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| D5070_RS11240 () | 2146434..2146718 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| D5070_RS11245 () | 2146893..2147636 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| D5070_RS11250 () | 2147662..2148921 | - | 1260 | WP_000120305.1 | hypothetical protein | - |
| D5070_RS11255 () | 2149118..2149744 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| D5070_RS11260 () | 2150105..2150890 | + | 786 | WP_000867941.1 | carbon-nitrogen family hydrolase | - |
| D5070_RS11265 () | 2151489..2151623 | - | 135 | WP_001823225.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0.002 |