MGE detailed information
MGE type: Prophage MGE length: 64886 bp
Accession: NZ_AP018923 Location: 1564908..1629793 Organism: Staphylococcus aureus strain JMUB3031 Replicon: chromosome
Accession: NZ_AP018923 Location: 1564908..1629793 Organism: Staphylococcus aureus strain JMUB3031 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5070_RS07830 () | 1560657..1560905 | + | 249 | WP_001151997.1 | ferredoxin | - |
| D5070_RS07835 () | 1561011..1561556 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| D5070_RS07840 () | 1561966..1562880 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| D5070_RS07845 () | 1562937..1563854 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| D5070_RS07850 () | 1563912..1564817 | - | 906 | WP_000476866.1 | DUF1672 domain-containing protein | - |
| D5070_RS07855 () | 1564908..1565093 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| D5070_RS07860 () | 1565338..1565793 | - | 456 | WP_000971220.1 | hypothetical protein | - |
| D5070_RS07865 () | 1565790..1566377 | - | 588 | WP_117219087.1 | hypothetical protein | - |
| D5070_RS07870 () | 1566769..1568223 | - | 1455 | WP_117219086.1 | N-acetylmuramoyl-L-alanine amidase | - |
| D5070_RS07875 () | 1568234..1568536 | - | 303 | WP_000339144.1 | phage holin | - |
| D5070_RS07880 () | 1568672..1568971 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| D5070_RS07885 () | 1569017..1569181 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| D5070_RS07890 () | 1569174..1569563 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| D5070_RS07895 () | 1569563..1571029 | - | 1467 | WP_117219085.1 | BppU family phage baseplate upper protein | - |
| D5070_RS07900 () | 1571029..1572939 | - | 1911 | WP_000429555.1 | hypothetical protein | - |
| D5070_RS07905 () | 1572955..1573245 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| D5070_RS07910 () | 1573245..1574828 | - | 1584 | WP_031768052.1 | prophage endopeptidase tail family protein | - |
| D5070_RS07915 () | 1574837..1575661 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| D5070_RS07920 () | 1575661..1581837 | - | 6177 | WP_119305742.1 | phage tail tape measure protein | - |
| D5070_RS07925 () | 1581851..1582009 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| D5070_RS07930 () | 1582051..1582401 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| D5070_RS07935 () | 1582459..1582914 | - | 456 | WP_031768047.1 | Ig domain-containing protein | - |
| D5070_RS07940 () | 1583006..1583647 | - | 642 | WP_117219083.1 | phage tail protein | - |
| D5070_RS07945 () | 1583682..1584077 | - | 396 | WP_001636966.1 | DUF3168 domain-containing protein | - |
| D5070_RS07950 () | 1584078..1584479 | - | 402 | WP_088607379.1 | hypothetical protein | - |
| D5070_RS07955 () | 1584476..1584808 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| D5070_RS07960 () | 1584820..1585098 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| D5070_RS07965 () | 1585167..1586330 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| D5070_RS07970 () | 1586342..1587115 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| D5070_RS07975 () | 1587099..1588337 | - | 1239 | WP_001100665.1 | phage portal protein | - |
| D5070_RS07980 () | 1588342..1590033 | - | 1692 | WP_000153544.1 | terminase large subunit | - |
| D5070_RS07985 () | 1590023..1590328 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| D5070_RS07990 () | 1590456..1590770 | - | 315 | WP_000160693.1 | HNH endonuclease | - |
| D5070_RS07995 () | 1590927..1591364 | - | 438 | WP_000528512.1 | transcriptional regulator | - |
| D5070_RS08000 () | 1591377..1592744 | - | 1368 | WP_119305744.1 | DEAD/DEAH box helicase | - |
| D5070_RS08005 () | 1592725..1593015 | - | 291 | WP_000665204.1 | VRR-NUC domain-containing protein | - |
| D5070_RS08010 () | 1593149..1593253 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| D5070_RS15155 () | 1593356..1595803 | - | 2448 | WP_172576659.1 | virulence-associated E family protein | - |
| D5070_RS08025 () | 1595855..1596055 | - | 201 | WP_043854698.1 | DUF1514 family protein | - |
| D5070_RS08030 () | 1596123..1596275 | - | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| D5070_RS08035 () | 1596272..1596478 | - | 207 | WP_000195820.1 | DUF1381 domain-containing protein | - |
| D5070_RS08040 () | 1596515..1597051 | - | 537 | WP_103150126.1 | dUTP diphosphatase | - |
| D5070_RS08045 () | 1597044..1597214 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| D5070_RS08050 () | 1597201..1597455 | - | 255 | WP_117219082.1 | DUF1024 family protein | - |
| D5070_RS08055 () | 1597647..1598027 | - | 381 | Protein_1506 | hypothetical protein | - |
| D5070_RS15160 () | 1598003..1598149 | - | 147 | Protein_1507 | acetyltransferase | - |
| D5070_RS08060 () | 1598164..1598412 | - | 249 | WP_117219081.1 | phi PVL orf 51-like protein | - |
| D5070_RS08065 () | 1598412..1598666 | - | 255 | WP_000111487.1 | DUF3310 domain-containing protein | - |
| D5070_RS08070 () | 1598666..1599067 | - | 402 | WP_000113977.1 | PVL family protein | - |
| D5070_RS08075 () | 1599067..1599252 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| D5070_RS08080 () | 1599265..1601217 | - | 1953 | WP_117219091.1 | DNA polymerase | - |
| D5070_RS08085 () | 1601286..1601843 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| D5070_RS08090 () | 1601869..1603035 | - | 1167 | WP_064129389.1 | DUF2800 domain-containing protein | - |
| D5070_RS08095 () | 1603032..1603394 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| D5070_RS08100 () | 1603409..1603732 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| D5070_RS08105 () | 1603811..1603972 | - | 162 | WP_001285963.1 | DUF1270 family protein | - |
| D5070_RS08110 () | 1603985..1604248 | - | 264 | WP_001124159.1 | helix-turn-helix domain-containing protein | - |
| D5070_RS08115 () | 1604273..1604488 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| D5070_RS08120 () | 1604543..1604908 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| D5070_RS08125 () | 1604877..1605122 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| D5070_RS08130 () | 1605178..1605387 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| D5070_RS08135 () | 1605377..1605520 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| D5070_RS08140 () | 1605549..1606325 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| D5070_RS08145 () | 1606339..1606575 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| D5070_RS08150 () | 1606727..1607041 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | - |
| D5070_RS08155 () | 1607054..1607515 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| D5070_RS08160 () | 1607533..1608117 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| D5070_RS08165 () | 1608347..1608493 | + | 147 | WP_072433242.1 | hypothetical protein | - |
| D5070_RS08170 () | 1608490..1609104 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| D5070_RS08175 () | 1609230..1610435 | + | 1206 | WP_000264747.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| D5070_RS08180 () | 1610478..1612505 | - | 2028 | WP_117219080.1 | hypothetical protein | - |
| D5070_RS08185 () | 1612517..1613425 | - | 909 | WP_001793476.1 | DUF1672 domain-containing protein | - |
| D5070_RS08190 () | 1613670..1615421 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| D5070_RS08195 () | 1615402..1616127 | - | 726 | WP_000064078.1 | Regulator of RpoS | VF |
| D5070_RS08200 () | 1616260..1616997 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| D5070_RS08205 () | 1616990..1617532 | - | 543 | WP_000368657.1 | SMC-Scp complex subunit ScpB | - |
| D5070_RS08210 () | 1617525..1618256 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| D5070_RS08215 () | 1618348..1618854 | + | 507 | WP_001183427.1 | DUF309 domain-containing protein | - |
| D5070_RS08220 () | 1618932..1619819 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| D5070_RS08225 () | 1619868..1620317 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| D5070_RS08230 () | 1620422..1620964 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| D5070_RS08235 () | 1621046..1621954 | + | 909 | WP_001171352.1 | aldo/keto reductase | - |
| D5070_RS08240 () | 1622170..1622418 | - | 249 | WP_000995799.1 | hypothetical protein | - |
| D5070_RS08245 () | 1622434..1623189 | - | 756 | WP_117200966.1 | SDR family oxidoreductase | - |
| D5070_RS08250 () | 1623331..1624146 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| D5070_RS08255 () | 1624249..1625169 | - | 921 | WP_000454068.1 | ribonuclease Z | - |
| D5070_RS08260 () | 1625482..1626966 | + | 1485 | WP_117200968.1 | glucose-6-phosphate dehydrogenase | - |
| D5070_RS08265 () | 1627196..1628062 | + | 867 | WP_000382586.1 | AraC family transcriptional regulator | - |
| D5070_RS08270 () | 1628144..1629793 | - | 1650 | WP_001041916.1 | alpha-glucosidase | - |
| D5070_RS08275 () | 1629809..1630828 | - | 1020 | WP_000256340.1 | LacI family DNA-binding transcriptional regulator | - |
| D5070_RS08280 () | 1630829..1631083 | - | 255 | WP_001837949.1 | hypothetical protein | - |
| D5070_RS08285 () | 1631022..1631393 | - | 372 | WP_000413427.1 | VOC family protein | - |
| D5070_RS08290 () | 1631612..1633018 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
| D5070_RS08295 () | 1633086..1634219 | - | 1134 | WP_000606674.1 | tripeptidase T | - |
| D5070_RS08300 () | 1634482..1634661 | + | 180 | WP_001789875.1 | stressosome-associated protein Prli42 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|