MGE detailed information
MGE type: Conjugative plasmid MGE length: 134879 bp
Accession: NZ_AP018673 Location: 1..134879 Organism: Klebsiella pneumoniae strain GSU10-3 Replicon: plasmid pGSU10-3-2
Accession: NZ_AP018673 Location: 1..134879 Organism: Klebsiella pneumoniae strain GSU10-3 Replicon: plasmid pGSU10-3-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D6O76_RS28695 () | 408..1421 | + | 1014 | WP_015065551.1 | replication protein | - |
| D6O76_RS28700 () | 1509..2213 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D6O76_RS28705 () | 2265..2606 | - | 342 | Protein_3 | Transcriptional regulatory protein CusR | VF |
| D6O76_RS28710 () | 2796..4181 | + | 1386 | WP_000475515.1 | Cation efflux system protein CusC | VF |
| D6O76_RS28715 () | 4210..4563 | + | 354 | WP_032433713.1 | cation efflux system protein CusF | - |
| D6O76_RS28720 () | 4677..5969 | + | 1293 | WP_004098959.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| D6O76_RS28725 () | 5980..9126 | + | 3147 | WP_000574021.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| D6O76_RS28730 () | 9213..9653 | + | 441 | WP_000758228.1 | hypothetical protein | - |
| D6O76_RS28735 () | 9780..12227 | + | 2448 | WP_004098955.1 | Ag(+)-translocating P-type ATPase SilP | - |
| D6O76_RS28740 () | 12268..12465 | + | 198 | WP_004388331.1 | DUF2933 domain-containing protein | - |
| D6O76_RS28745 () | 12499..13236 | - | 738 | WP_004388332.1 | Murein DD-endopeptidase MepM | VF |
| D6O76_RS28750 () | 13525..13974 | - | 450 | WP_001023257.1 | copper resistance protein | - |
| D6O76_RS28755 () | 14209..16026 | + | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| D6O76_RS28760 () | 16032..16922 | + | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| D6O76_RS28765 () | 16962..17342 | + | 381 | WP_023316433.1 | copper resistance system metallochaperone PcoC | - |
| D6O76_RS28770 () | 17347..18276 | + | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| D6O76_RS28775 () | 18331..19011 | + | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| D6O76_RS28780 () | 19008..20408 | + | 1401 | WP_002436614.1 | copper resistance membrane spanning protein PcoS | - |
| D6O76_RS28785 () | 20624..21058 | + | 435 | WP_004118347.1 | hypothetical protein | - |
| D6O76_RS28795 () | 21436..21534 | - | 99 | WP_004118688.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D6O76_RS28800 () | 21521..21700 | - | 180 | WP_004118349.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| D6O76_RS28805 () | 22014..22277 | + | 264 | WP_004118691.1 | hypothetical protein | - |
| D6O76_RS28810 () | 22274..22840 | + | 567 | WP_009654312.1 | hypothetical protein | - |
| D6O76_RS28815 () | 22871..23365 | + | 495 | WP_016528789.1 | hypothetical protein | - |
| D6O76_RS28820 () | 23426..23629 | + | 204 | WP_004150739.1 | hemolysin expression modulator Hha | - |
| D6O76_RS28825 () | 23678..23935 | + | 258 | WP_004098928.1 | hypothetical protein | - |
| D6O76_RS28830 () | 24011..24265 | + | 255 | WP_016528790.1 | hypothetical protein | - |
| D6O76_RS28835 () | 24416..24841 | - | 426 | WP_023316432.1 | glutaredoxin-dependent arsenate reductase | - |
| D6O76_RS28840 () | 24854..26143 | - | 1290 | WP_032409266.1 | arsenic transporter | - |
| D6O76_RS28845 () | 26188..26508 | - | 321 | WP_004206577.1 | transcriptional regulator | - |
| D6O76_RS28850 () | 26594..27292 | + | 699 | WP_016151343.1 | arsenical resistance protein ArsH | - |
| D6O76_RS28855 () | 27421..27726 | - | 306 | WP_004206574.1 | PadR family transcriptional regulator | - |
| D6O76_RS28860 () | 27737..28942 | - | 1206 | WP_004206572.1 | chromate efflux transporter | - |
| D6O76_RS28865 () | 29118..29696 | - | 579 | WP_040229494.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| D6O76_RS28870 () | 29855..32147 | + | 2293 | Protein_35 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| D6O76_RS28875 () | 32444..32710 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| D6O76_RS28880 () | 32698..33180 | + | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| D6O76_RS28885 () | 33296..33466 | + | 171 | Protein_38 | ISNCY family transposase ISLad2 | Transposase |
| D6O76_RS28890 () | 33500..35251 | - | 1752 | Protein_39 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| D6O76_RS28895 () | 35240..35647 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| D6O76_RS28900 () | 35785..36669 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| D6O76_RS28905 () | 36701..37900 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| D6O76_RS28910 () | 38006..38656 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| D6O76_RS28915 () | 38688..38930 | - | 243 | WP_032140899.1 | hypothetical protein | - |
| D6O76_RS28920 () | 38972..40486 | - | 1515 | Protein_45 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| D6O76_RS28925 () | 40552..41256 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D6O76_RS28930 () | 41400..41954 | + | 555 | WP_064765190.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| D6O76_RS28935 () | 42085..42915 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| D6O76_RS28940 () | 43053..43493 | + | 441 | Protein_49 | CatB-related O-acetyltransferase | - |
| D6O76_RS28945 () | 43547..44251 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D6O76_RS28950 () | 44358..45218 | + | 861 | WP_000557452.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| D6O76_RS28955 () | 45231..45773 | + | 543 | WP_002063889.1 | AAA family ATPase | - |
| D6O76_RS28960 () | 45865..46913 | + | 1049 | Protein_53 | IS3 family transposase ISKpn11 | Transposase |
| D6O76_RS28965 () | 46967..47671 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D6O76_RS28970 () | 47736..49793 | - | 2058 | Protein_55 | Tn3 family transposase TnpA_Tn3 | Transposase |
| D6O76_RS28975 () | 49859..50563 | + | 705 | WP_004186977.1 | IS6 family transposase IS26 | Transposase |
| D6O76_RS28985 () | 50617..51714 | + | 1098 | Protein_57 | IS66 family transposase ISPsy43 | Transposase |
| D6O76_RS28990 () | 51965..52528 | - | 564 | WP_001097412.1 | chlorite dismutase family protein | - |
| D6O76_RS28995 () | 52552..52926 | - | 375 | WP_001348195.1 | cupin domain-containing protein | - |
| D6O76_RS29000 () | 52991..53554 | - | 564 | WP_001515734.1 | IS66 family transposase ISPpu15 | Transposase |
| D6O76_RS29010 () | 53797..54132 | + | 336 | WP_000046891.1 | thermonuclease family protein | - |
| D6O76_RS29015 () | 55006..55206 | + | 201 | Protein_62 | IS6 family transposase IS15 | Transposase |
| D6O76_RS29025 () | 55258..55962 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D6O76_RS29030 () | 56018..56416 | + | 399 | Protein_64 | recombinase family protein | - |
| D6O76_RS29035 () | 56463..57113 | + | 651 | WP_015065500.1 | SOS response-associated peptidase | - |
| D6O76_RS29040 () | 57410..58405 | + | 996 | WP_019725651.1 | hypothetical protein | - |
| D6O76_RS29045 () | 58478..58801 | + | 324 | WP_019725650.1 | hypothetical protein | - |
| D6O76_RS31000 () | 59235..59429 | + | 195 | WP_019725033.1 | hypothetical protein | - |
| D6O76_RS29055 () | 59473..59703 | - | 231 | WP_019725034.1 | hypothetical protein | - |
| D6O76_RS29060 () | 59717..59920 | - | 204 | WP_019725040.1 | hemolysin expression modulator Hha | - |
| D6O76_RS29065 () | 59954..60322 | - | 369 | WP_015065502.1 | hypothetical protein | - |
| D6O76_RS29070 () | 60366..60860 | - | 495 | WP_009310053.1 | hypothetical protein | - |
| D6O76_RS29075 () | 60891..61463 | - | 573 | WP_015065504.1 | hypothetical protein | - |
| D6O76_RS29080 () | 61460..61708 | - | 249 | WP_019725036.1 | hypothetical protein | - |
| D6O76_RS29095 () | 62304..62522 | + | 219 | WP_004197642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| D6O76_RS29100 () | 62524..62829 | + | 306 | WP_004197633.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| D6O76_RS29105 () | 62998..63399 | + | 402 | WP_072199347.1 | hypothetical protein | - |
| D6O76_RS29110 () | 63426..63749 | + | 324 | WP_004197641.1 | hypothetical protein | - |
| D6O76_RS29115 () | 63746..64762 | + | 1017 | WP_004197639.1 | hypothetical protein | - |
| D6O76_RS29120 () | 64960..65754 | + | 795 | WP_004197635.1 | site-specific integrase | - |
| D6O76_RS29125 () | 66202..66381 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| D6O76_RS29130 () | 66501..67127 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| D6O76_RS29135 () | 67752..68627 | - | 876 | WP_004197644.1 | RepB family plasmid replication initiator protein | - |
| D6O76_RS29140 () | 69039..70310 | - | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| D6O76_RS29145 () | 70310..70741 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| D6O76_RS29150 () | 70975..71946 | + | 972 | WP_004152353.1 | mediator of plasmid stability | - |
| D6O76_RS29155 () | 71949..72620 | + | 672 | WP_032330269.1 | plasmid partitioning/stability family protein | - |
| D6O76_RS29160 () | 72683..72913 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| D6O76_RS29170 () | 73350..74051 | + | 702 | WP_004152355.1 | DNA methylase | - |
| D6O76_RS29175 () | 74051..74272 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| D6O76_RS29180 () | 74282..74701 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| D6O76_RS29185 () | 74755..75522 | + | 768 | WP_013214013.1 | hypothetical protein | - |
| D6O76_RS31050 () | 76202..76630 | + | 429 | WP_023279469.1 | antirestriction protein | - |
| D6O76_RS29195 () | 76673..77179 | + | 507 | WP_015065510.1 | antirestriction protein ArdA | - |
| D6O76_RS29200 () | 77222..77413 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| D6O76_RS29205 () | 77601..77855 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| D6O76_RS29210 () | 77890..78210 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| D6O76_RS29225 () | 78889..79116 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| D6O76_RS29230 () | 79208..79438 | + | 231 | WP_009310031.1 | hypothetical protein | - |
| D6O76_RS29235 () | 79490..80845 | + | 1356 | WP_015065512.1 | DUF3560 domain-containing protein | - |
| D6O76_RS29240 () | 80893..81456 | + | 564 | WP_004152756.1 | methyltransferase | - |
| D6O76_RS29255 () | 82287..82829 | + | 543 | WP_015065513.1 | single-stranded DNA-binding protein | - |
| D6O76_RS29260 () | 82878..83126 | + | 249 | WP_009310026.1 | DUF905 domain-containing protein | - |
| D6O76_RS29265 () | 83196..85253 | + | 2058 | WP_015065514.1 | ParB/RepB/Spo0J family partition protein | - |
| D6O76_RS29270 () | 85298..85729 | + | 432 | WP_015065515.1 | conjugation system SOS inhibitor PsiB | - |
| D6O76_RS29275 () | 85726..86454 | + | 729 | WP_015065516.1 | plasmid SOS inhibition protein A | - |
| D6O76_RS29280 () | 86451..86777 | + | 327 | WP_015065517.1 | hypothetical protein | - |
| D6O76_RS29285 () | 86833..87207 | + | 375 | WP_023287106.1 | hypothetical protein | - |
| D6O76_RS29295 () | 87463..87621 | + | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| D6O76_RS29300 () | 88315..88587 | + | 273 | WP_023287105.1 | hypothetical protein | - |
| D6O76_RS29305 () | 88584..88934 | + | 351 | WP_032330277.1 | hypothetical protein | - |
| D6O76_RS29310 () | 88949..89266 | + | 318 | WP_015065519.1 | hypothetical protein | - |
| D6O76_RS29320 () | 90107..90463 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| D6O76_RS29325 () | 90524..90736 | + | 213 | WP_019706020.1 | hypothetical protein | - |
| D6O76_RS29330 () | 90747..90971 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| D6O76_RS29335 () | 91052..91372 | + | 321 | WP_015065521.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D6O76_RS29340 () | 91362..91640 | + | 279 | WP_020801586.1 | helix-turn-helix domain-containing protein | - |
| D6O76_RS29345 () | 91641..92042 | + | 402 | WP_015065522.1 | helix-turn-helix domain-containing protein | - |
| D6O76_RS29360 () | 92871..93693 | + | 823 | Protein_119 | DUF945 domain-containing protein | - |
| D6O76_RS29365 () | 93726..94055 | + | 330 | WP_015065524.1 | hypothetical protein | - |
| D6O76_RS29370 () | 94088..94573 | - | 486 | WP_064172160.1 | hypothetical protein | VF |
| D6O76_RS29375 () | 94964..95380 | + | 417 | WP_072145360.1 | relaxosome protein TraM | - |
| D6O76_RS29380 () | 95580..96299 | + | 720 | WP_015065526.1 | hypothetical protein | - |
| D6O76_RS29385 () | 96432..96635 | + | 204 | WP_171486139.1 | TraY domain-containing protein | - |
| D6O76_RS29390 () | 96700..97068 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| D6O76_RS29395 () | 97082..97387 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| D6O76_RS29400 () | 97407..97973 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| D6O76_RS29405 () | 97960..98700 | + | 741 | WP_015065528.1 | type-F conjugative transfer system secretin TraK | - |
| D6O76_RS29410 () | 98700..100124 | + | 1425 | WP_004194260.1 | conjugal transfer protein TraB | - |
| D6O76_RS29415 () | 100238..100822 | + | 585 | WP_015065529.1 | type IV conjugative transfer system lipoprotein TraV | - |
| D6O76_RS29420 () | 100954..101364 | + | 411 | WP_032329942.1 | hypothetical protein | - |
| D6O76_RS29425 () | 101470..101688 | + | 219 | WP_004152501.1 | hypothetical protein | - |
| D6O76_RS29430 () | 101689..102000 | + | 312 | WP_004152502.1 | hypothetical protein | - |
| D6O76_RS29435 () | 102067..102471 | + | 405 | WP_004152503.1 | hypothetical protein | - |
| D6O76_RS29440 () | 102514..102905 | + | 392 | Protein_135 | hypothetical protein | - |
| D6O76_RS29445 () | 102913..103311 | + | 399 | WP_011977783.1 | hypothetical protein | - |
| D6O76_RS29450 () | 103383..106022 | + | 2640 | WP_004152505.1 | type IV secretion system protein TraC | - |
| D6O76_RS29455 () | 106022..106411 | + | 390 | WP_004152506.1 | type-F conjugative transfer system protein TrbI | - |
| D6O76_RS29460 () | 106411..107037 | + | 627 | WP_009309871.1 | type-F conjugative transfer system protein TraW | - |
| D6O76_RS29465 () | 107079..107468 | + | 390 | WP_015065532.1 | hypothetical protein | - |
| D6O76_RS29470 () | 107465..108454 | + | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| D6O76_RS29475 () | 108467..109105 | + | 639 | WP_015065635.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| D6O76_RS29480 () | 109164..111119 | + | 1956 | WP_030003482.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| D6O76_RS29485 () | 111151..111405 | + | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| D6O76_RS29490 () | 111383..111631 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| D6O76_RS29495 () | 111644..111970 | + | 327 | WP_004144402.1 | hypothetical protein | - |
| D6O76_RS29500 () | 111991..112743 | + | 753 | WP_020803149.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| D6O76_RS29505 () | 112754..112993 | + | 240 | WP_004152687.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| D6O76_RS29510 () | 112965..113537 | + | 573 | WP_023292147.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| D6O76_RS29515 () | 113530..113958 | + | 429 | WP_015065560.1 | hypothetical protein | - |
| D6O76_RS29520 () | 113945..115315 | + | 1371 | WP_004159274.1 | conjugal transfer protein TraH | - |
| D6O76_RS29525 () | 115315..118158 | + | 2844 | WP_015065537.1 | conjugal transfer mating pair stabilization protein TraG | - |
| D6O76_RS29530 () | 118169..118693 | + | 525 | WP_015065538.1 | hypothetical protein | - |
| D6O76_RS29535 () | 119002..119733 | + | 732 | WP_032329926.1 | complement resistance protein TraT | - |
| D6O76_RS31010 () | 119925..120614 | + | 690 | WP_015065540.1 | hypothetical protein | - |
| D6O76_RS29545 () | 120743..123055 | + | 2313 | Protein_156 | type IV conjugative transfer system coupling protein TraD | - |
| D6O76_RS29550 () | 123055..128313 | + | 5259 | WP_087703393.1 | Multifunctional conjugation protein TraI | Relaxase |
| D6O76_RS29555 () | 128393..129118 | + | 726 | WP_015065543.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| D6O76_RS29560 () | 129274..129867 | + | 594 | WP_015065544.1 | fertility inhibition protein FinO | - |
| D6O76_RS29565 () | 130084..131052 | - | 969 | WP_013815099.1 | IS5 family transposase IS903B | Transposase |
| D6O76_RS29575 () | 131094..131696 | + | 603 | WP_015065545.1 | hypothetical protein | - |
| D6O76_RS29580 () | 131746..132390 | + | 645 | WP_015065546.1 | hypothetical protein | - |
| D6O76_RS29585 () | 132446..133096 | + | 651 | WP_022631529.1 | DUF2726 domain-containing protein | - |
| D6O76_RS29590 () | 133093..133401 | + | 309 | WP_015065549.1 | hypothetical protein | - |
| D6O76_RS29595 () | 133577..134056 | + | 480 | WP_023157996.1 | Phospholipase D | VF |
| D6O76_RS29600 () | 134192..134461 | + | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
| D6O76_RS29605 () | 134673..134750 | + | 78 | WP_014386216.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|