MGE detailed information
MGE type: Conjugative plasmid MGE length: 108957 bp
Accession: NZ_AP017613 Location: 1..108957 Organism: Escherichia coli strain 20Ec-P-124 Replicon: plasmid pMRY16-002_3
Accession: NZ_AP017613 Location: 1..108957 Organism: Escherichia coli strain 20Ec-P-124 Replicon: plasmid pMRY16-002_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ02_RS27145 () | 1054..1599 | + | 546 | WP_001369268.1 | hypothetical protein | - |
| CPZ02_RS27150 () | 1572..1952 | - | 381 | WP_000690882.1 | hypothetical protein | - |
| CPZ02_RS29100 () | 1952..2311 | - | 360 | WP_000379509.1 | hypothetical protein | - |
| CPZ02_RS27155 () | 2370..3188 | - | 819 | WP_072148514.1 | conjugal transfer protein TraT | - |
| CPZ02_RS27160 () | 3103..3354 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| CPZ02_RS27165 () | 3411..3809 | - | 399 | WP_000086067.1 | hypothetical protein | - |
| CPZ02_RS27170 () | 3856..4383 | - | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| CPZ02_RS27175 () | 4383..5096 | - | 714 | WP_000787006.1 | conjugal transfer protein TraP | - |
| CPZ02_RS27180 () | 5093..6424 | - | 1332 | WP_009453278.1 | conjugal transfer protein TraO | - |
| CPZ02_RS27185 () | 6428..7402 | - | 975 | WP_001165565.1 | hypothetical protein | VF |
| CPZ02_RS27190 () | 7413..8108 | - | 696 | WP_001287261.1 | DotI/IcmL family type IV secretion protein | - |
| CPZ02_RS27195 () | 8120..8470 | - | 351 | WP_001056365.1 | hypothetical protein | - |
| CPZ02_RS27200 () | 8487..12503 | - | 4017 | WP_021554958.1 | hypothetical protein | - |
| CPZ02_RS27205 () | 12567..12857 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| CPZ02_RS27210 () | 12854..14002 | - | 1149 | WP_000625246.1 | putative protein YggR | VF |
| CPZ02_RS27215 () | 13986..14822 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| CPZ02_RS27220 () | 14819..15271 | - | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| CPZ02_RS29105 () | 15320..15490 | - | 171 | WP_000482367.1 | hypothetical protein | - |
| CPZ02_RS27225 () | 15630..16832 | - | 1203 | WP_000980151.1 | conjugal transfer protein TraF | - |
| CPZ02_RS27230 () | 16922..17743 | - | 822 | WP_096488305.1 | conjugal transfer protein TraE | - |
| CPZ02_RS27235 () | 18003..18323 | + | 321 | WP_000695052.1 | hypothetical protein | - |
| CPZ02_RS27240 () | 18415..18705 | - | 291 | WP_000681898.1 | hypothetical protein | - |
| CPZ02_RS27245 () | 18747..19916 | - | 1170 | WP_000486835.1 | site-specific integrase | - |
| CPZ02_RS27260 () | 20531..21893 | - | 1363 | Protein_24 | hypothetical protein | VF |
| CPZ02_RS27265 () | 21898..22533 | - | 636 | WP_000478596.1 | prepilin peptidase | - |
| CPZ02_RS27270 () | 22552..23025 | - | 474 | WP_000870986.1 | hypothetical protein | VF |
| CPZ02_RS27275 () | 23079..23615 | - | 537 | WP_001011156.1 | cleavage protein | - |
| CPZ02_RS27280 () | 23689..24789 | - | 1101 | WP_000670135.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CPZ02_RS27285 () | 24791..26299 | - | 1509 | WP_000886638.1 | Type II secretion system protein E | VF |
| CPZ02_RS27290 () | 26384..26836 | - | 453 | WP_001112926.1 | type IV pilus biogenesis protein PilP | - |
| CPZ02_RS27295 () | 26826..28121 | - | 1296 | WP_000129889.1 | type 4b pilus protein PilO2 | - |
| CPZ02_RS27300 () | 28142..29761 | - | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| CPZ02_RS27305 () | 29792..30229 | - | 438 | WP_000539685.1 | type IV pilus biogenesis protein PilM | - |
| CPZ02_RS27310 () | 30234..31304 | - | 1071 | WP_001170192.1 | hypothetical protein | VF |
| CPZ02_RS27315 () | 31461..31796 | - | 336 | WP_024174020.1 | hypothetical protein | - |
| CPZ02_RS27320 () | 31913..32230 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| CPZ02_RS27325 () | 32236..33930 | - | 1695 | WP_000482663.1 | flotillin family protein | - |
| CPZ02_RS27330 () | 33957..34577 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| CPZ02_RS27340 () | 34844..35509 | - | 666 | WP_000154143.1 | hypothetical protein | - |
| CPZ02_RS27345 () | 35650..36291 | - | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| CPZ02_RS27355 () | 36994..37866 | + | 873 | WP_000729440.1 | incFII family plasmid replication initiator RepA | - |
| CPZ02_RS27375 () | 38815..39066 | + | 252 | WP_001139207.1 | plasmid stabilization protein | Antitoxin Detail |
| CPZ02_RS27380 () | 39063..39332 | + | 270 | WP_096488308.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CPZ02_RS27385 () | 39361..40058 | + | 698 | Protein_44 | IS1 family transposase IS1R | Transposase |
| CPZ02_RS27390 () | 40227..41042 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CPZ02_RS27395 () | 41232..41936 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CPZ02_RS27400 () | 42001..43251 | - | 1251 | Protein_47 | transposase | - |
| CPZ02_RS27410 () | 43326..43994 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| CPZ02_RS27415 () | 44030..44266 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| CPZ02_RS27420 () | 44263..44625 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| CPZ02_RS27425 () | 44643..46337 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| CPZ02_RS27430 () | 46389..46811 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| CPZ02_RS27435 () | 46847..47122 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| CPZ02_RS27440 () | 47136..47486 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| CPZ02_RS27445 () | 47558..47992 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| CPZ02_RS27460 () | 48995..49237 | + | 243 | WP_000844627.1 | transposase | - |
| CPZ02_RS27465 () | 49269..49919 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CPZ02_RS27470 () | 50025..51224 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CPZ02_RS27475 () | 51256..52140 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| CPZ02_RS27480 () | 52278..52685 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| CPZ02_RS27485 () | 52674..54425 | + | 1752 | Protein_61 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CPZ02_RS27495 () | 54891..56165 | + | 1275 | WP_024174015.1 | hypothetical protein | - |
| CPZ02_RS27500 () | 56183..56530 | - | 348 | WP_000762572.1 | colicin transporter | - |
| CPZ02_RS27505 () | 56725..57953 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| CPZ02_RS27510 () | 57985..58332 | + | 348 | WP_000142445.1 | hypothetical protein | - |
| CPZ02_RS29110 () | 58352..58513 | - | 162 | WP_000251881.1 | hypothetical protein | - |
| CPZ02_RS29115 () | 58960..59262 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| CPZ02_RS27520 () | 59259..59885 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CPZ02_RS27525 () | 60089..61360 | - | 1272 | WP_000457473.1 | Y-family DNA polymerase | - |
| CPZ02_RS27530 () | 61360..61797 | - | 438 | WP_000109077.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CPZ02_RS27535 () | 61794..62042 | - | 249 | WP_000619113.1 | DinI-like family protein | - |
| CPZ02_RS27545 () | 62460..63362 | + | 903 | WP_023842311.1 | DUF1281 domain-containing protein | - |
| CPZ02_RS27550 () | 63359..63670 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| CPZ02_RS27555 () | 63747..64430 | + | 684 | WP_000086152.1 | DNA methylase | - |
| CPZ02_RS27560 () | 64431..64652 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| CPZ02_RS27565 () | 64666..65100 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| CPZ02_RS29185 () | 65146..65922 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| CPZ02_RS27580 () | 66463..66765 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| CPZ02_RS27585 () | 66812..67231 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| CPZ02_RS27590 () | 67231..67422 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| CPZ02_RS28900 () | 67493..67807 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| CPZ02_RS27605 () | 68191..68718 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| CPZ02_RS27610 () | 68776..69009 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| CPZ02_RS27615 () | 69068..71026 | + | 1959 | WP_096488312.1 | ParB/RepB/Spo0J family partition protein | - |
| CPZ02_RS27620 () | 71081..71515 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| CPZ02_RS27625 () | 71512..72231 | + | 720 | WP_096488314.1 | plasmid SOS inhibition protein A | - |
| CPZ02_RS27630 () | 72228..72824 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| CPZ02_RS27640 () | 73287..73787 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| CPZ02_RS27650 () | 74518..74952 | + | 435 | WP_000218850.1 | hypothetical protein | - |
| CPZ02_RS27655 () | 75045..75311 | + | 267 | WP_001247861.1 | hypothetical protein | - |
| CPZ02_RS27660 () | 75502..75891 | + | 390 | WP_001317525.1 | hypothetical protein | - |
| CPZ02_RS27665 () | 75888..76814 | + | 927 | WP_000038345.1 | Recombination-promoting nuclease RpnA | VF |
| CPZ02_RS27670 () | 76814..77035 | + | 222 | WP_009453089.1 | hypothetical protein | - |
| CPZ02_RS27675 () | 77066..77317 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CPZ02_RS27685 () | 77896..78744 | + | 849 | WP_001077046.1 | DUF4942 domain-containing protein | - |
| CPZ02_RS27690 () | 78829..79164 | - | 336 | WP_000157096.1 | hypothetical protein | - |
| CPZ02_RS27695 () | 79397..79729 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| CPZ02_RS27700 () | 79741..82452 | + | 2712 | WP_000991386.1 | Protein TraI | Relaxase |
| CPZ02_RS27705 () | 82520..82951 | + | 432 | WP_001335086.1 | hypothetical protein | - |
| CPZ02_RS27710 () | 83049..83279 | - | 231 | WP_032072127.1 | hypothetical protein | - |
| CPZ02_RS27720 () | 83758..86061 | - | 2304 | WP_000077655.1 | TraM recognition domain-containing protein | - |
| CPZ02_RS27725 () | 86042..87160 | - | 1119 | WP_000155608.1 | DsbC family protein | - |
| CPZ02_RS27730 () | 87157..88446 | - | 1290 | WP_096488317.1 | IncI1-type conjugal transfer protein TrbA | - |
| CPZ02_RS27735 () | 89183..89494 | - | 312 | WP_000203479.1 | hypothetical protein | - |
| CPZ02_RS27740 () | 89522..89713 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| CPZ02_RS27745 () | 89726..90088 | - | 363 | WP_000997721.1 | hypothetical protein | - |
| CPZ02_RS27755 () | 90222..90431 | + | 210 | WP_050561356.1 | hypothetical protein | - |
| CPZ02_RS27760 () | 90594..94685 | - | 4092 | WP_072004513.1 | Serine protease SepA autotransporter | VF |
| CPZ02_RS27765 () | 95050..95553 | - | 504 | WP_000598957.1 | thermonuclease family protein | - |
| CPZ02_RS27770 () | 95712..96335 | + | 624 | WP_001158020.1 | hypothetical protein | - |
| CPZ02_RS27775 () | 96423..96878 | + | 456 | WP_001205146.1 | DUF2569 family protein | - |
| CPZ02_RS27780 () | 97078..98613 | + | 1536 | WP_001317519.1 | phosphoethanolamine transferase | - |
| CPZ02_RS27785 () | 98706..98948 | - | 243 | WP_000064387.1 | hypothetical protein | - |
| CPZ02_RS27790 () | 99281..99433 | + | 153 | WP_001597021.1 | Hok/Gef family protein | - |
| CPZ02_RS27795 () | 99571..101157 | - | 1587 | WP_000004565.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| CPZ02_RS27800 () | 101431..102084 | - | 654 | WP_001098361.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CPZ02_RS27805 () | 102155..104320 | - | 2166 | WP_000691804.1 | DotA/TraY family protein | - |
| CPZ02_RS27810 () | 104393..104962 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| CPZ02_RS27815 () | 104959..106164 | - | 1206 | WP_001189539.1 | conjugal transfer protein TraW | - |
| CPZ02_RS27820 () | 106125..106742 | - | 618 | WP_000286861.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6131 | NC_022996 | 1..124908 | 0.01 |