MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 106137 bp
Accession: NZ_AP014802 Location: 1..106137 Organism: Rhodovulum sulfidophilum Replicon: plasmid Plasmid2 DNA
Accession: NZ_AP014802 Location: 1..106137 Organism: Rhodovulum sulfidophilum Replicon: plasmid Plasmid2 DNA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHU_RS21040 () | 23..1458 | - | 1436 | Protein_1 | IS21 family transposase | - |
| NHU_RS21045 () | 2209..2742 | - | 534 | WP_060836685.1 | hypothetical protein | - |
| NHU_RS21050 () | 3138..3812 | - | 675 | WP_060836686.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| NHU_RS21055 () | 3841..4872 | - | 1032 | WP_060836687.1 | NADP-dependent oxidoreductase | - |
| NHU_RS21060 () | 5171..6607 | - | 1437 | WP_060836688.1 | hypothetical protein | - |
| NHU_RS21065 () | 7040..8050 | - | 1011 | WP_060836689.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| NHU_RS21070 () | 8047..8784 | - | 738 | WP_060836690.1 | SDR family oxidoreductase | - |
| NHU_RS21075 () | 8781..10121 | - | 1341 | WP_060836691.1 | histidinol dehydrogenase | - |
| NHU_RS21080 () | 10148..11467 | - | 1320 | WP_060836692.1 | TRAP transporter large permease | - |
| NHU_RS21085 () | 11477..11983 | - | 507 | WP_060836693.1 | TRAP transporter small permease | - |
| NHU_RS21090 () | 12084..13241 | - | 1158 | WP_060836694.1 | TRAP transporter substrate-binding protein | - |
| NHU_RS21095 () | 13285..13509 | - | 225 | WP_060836695.1 | hypothetical protein | - |
| NHU_RS21100 () | 13623..14666 | + | 1044 | WP_060836696.1 | LacI family DNA-binding transcriptional regulator | - |
| NHU_RS21105 () | 15364..15594 | + | 231 | WP_060836697.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| NHU_RS21110 () | 15584..15988 | + | 405 | WP_060836698.1 | PIN domain-containing protein | Toxin Detail |
| NHU_RS21115 () | 16092..16763 | + | 672 | WP_042465589.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| NHU_RS21120 () | 16777..17661 | - | 885 | WP_060836699.1 | DMT family transporter | - |
| NHU_RS21125 () | 17955..18575 | + | 621 | WP_060836700.1 | exopolysaccharide biosynthesis protein | - |
| NHU_RS21130 () | 19059..19682 | + | 624 | WP_060836701.1 | RNA ligase family protein | - |
| NHU_RS21135 () | 20243..20884 | - | 642 | WP_060836702.1 | TetR/AcrR family transcriptional regulator | - |
| NHU_RS21140 () | 21043..23193 | + | 2151 | WP_060836703.1 | TonB-dependent siderophore receptor | - |
| NHU_RS21145 () | 23187..24272 | + | 1086 | WP_060836704.1 | ABC transporter substrate-binding protein | - |
| NHU_RS21150 () | 24363..25424 | + | 1062 | WP_060836705.1 | siderophore-interacting protein | - |
| NHU_RS21155 () | 26041..27027 | - | 987 | WP_060836754.1 | AraC family transcriptional regulator | - |
| NHU_RS21160 () | 27172..28833 | + | 1662 | WP_060836706.1 | AMP-binding protein | - |
| NHU_RS21165 () | 28847..29605 | + | 759 | WP_060836707.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| NHU_RS21170 () | 29616..30797 | + | 1182 | WP_060836708.1 | acetyl-CoA C-acyltransferase | - |
| NHU_RS21175 () | 30794..31921 | + | 1128 | WP_060836709.1 | acyl-CoA dehydrogenase family protein | - |
| NHU_RS21180 () | 32142..32387 | - | 246 | WP_060836710.1 | hypothetical protein | - |
| NHU_RS21185 () | 32522..33046 | + | 525 | WP_060836711.1 | hypothetical protein | - |
| NHU_RS21190 () | 33216..33731 | - | 516 | WP_060836712.1 | hypothetical protein | - |
| NHU_RS21195 () | 34293..34553 | - | 261 | WP_060836713.1 | PAAR domain-containing protein | - |
| NHU_RS21200 () | 34553..36601 | - | 2049 | WP_060836714.1 | type VI secretion system tip protein VgrG | - |
| NHU_RS21205 () | 37144..37395 | + | 252 | WP_060836715.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| NHU_RS21210 () | 37392..37661 | + | 270 | WP_060836716.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| NHU_RS21215 () | 38352..40130 | - | 1779 | WP_060836717.1 | ABC transporter ATP-binding protein/permease | - |
| NHU_RS21220 () | 40127..41950 | - | 1824 | WP_060836718.1 | ABC transporter ATP-binding protein/permease | - |
| NHU_RS21225 () | 42214..44211 | - | 1998 | WP_060836719.1 | TonB-dependent receptor | - |
| NHU_RS21230 () | 44208..45395 | - | 1188 | WP_060836720.1 | MFS transporter | - |
| NHU_RS21235 () | 45544..46590 | + | 1047 | WP_082241840.1 | AraC family transcriptional regulator | - |
| NHU_RS21240 () | 46907..47980 | - | 1074 | WP_060836722.1 | BLUF domain-containing protein | - |
| NHU_RS21245 () | 48392..50011 | - | 1620 | WP_060836723.1 | isocitrate lyase | - |
| NHU_RS21250 () | 50135..51760 | - | 1626 | WP_060836724.1 | malate synthase A | - |
| NHU_RS21255 () | 51915..53363 | + | 1449 | WP_060836725.1 | helix-turn-helix transcriptional regulator | - |
| NHU_RS21260 () | 53419..54261 | - | 843 | WP_060836726.1 | metal ABC transporter permease | - |
| NHU_RS21265 () | 54261..55121 | - | 861 | WP_060836727.1 | metal ABC transporter permease | - |
| NHU_RS21270 () | 55118..56020 | - | 903 | WP_060836728.1 | manganese/iron ABC transporter ATP-binding protein | - |
| NHU_RS21275 () | 56091..56996 | - | 906 | WP_060836729.1 | metal ABC transporter substrate-binding protein | - |
| NHU_RS21280 () | 57284..57709 | + | 426 | WP_042465688.1 | transcriptional repressor | - |
| NHU_RS21285 () | 58132..59262 | + | 1131 | WP_060836730.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| NHU_RS21290 () | 59621..60316 | - | 696 | WP_060836731.1 | Crp/Fnr family transcriptional regulator | - |
| NHU_RS21295 () | 60416..60823 | + | 408 | WP_060836732.1 | hypothetical protein | - |
| NHU_RS21300 () | 60890..62071 | + | 1182 | WP_060836733.1 | NnrS family protein | - |
| NHU_RS21305 () | 62518..63243 | + | 726 | Protein_54 | ABC transporter ATP-binding protein | - |
| NHU_RS21310 () | 63271..64389 | + | 1119 | WP_060836734.1 | SufD family Fe-S cluster assembly protein | - |
| NHU_RS21315 () | 64576..65598 | - | 1023 | WP_060836735.1 | ABC transporter substrate-binding protein | - |
| NHU_RS21320 () | 66196..66744 | + | 549 | WP_060836755.1 | heme utilization cystosolic carrier protein HutX | - |
| NHU_RS21325 () | 67313..67546 | + | 234 | WP_060836736.1 | hypothetical protein | - |
| NHU_RS21330 () | 67763..68122 | - | 360 | WP_042465702.1 | hypothetical protein | - |
| NHU_RS21335 () | 68371..72285 | - | 3915 | WP_082241841.1 | autotransporter domain-containing protein | - |
| NHU_RS21340 () | 72761..73787 | + | 1027 | Protein_61 | hypothetical protein | - |
| NHU_RS21345 () | 74131..75468 | - | 1338 | WP_082241842.1 | replication initiation protein RepC | - |
| NHU_RS21350 () | 75646..76581 | - | 936 | WP_060836738.1 | plasmid partitioning protein RepB | - |
| NHU_RS21355 () | 76583..77761 | - | 1179 | WP_042465503.1 | plasmid partitioning protein RepA | - |
| NHU_RS21360 () | 78134..79990 | + | 1857 | WP_060836757.1 | ABC transporter ATP-binding protein/permease | - |
| NHU_RS21365 () | 79987..81795 | + | 1809 | WP_060836739.1 | ABC transporter ATP-binding protein/permease | - |
| NHU_RS21370 () | 81796..82653 | - | 858 | WP_082241844.1 | ABC transporter ATP-binding protein | - |
| NHU_RS21375 () | 82691..84232 | - | 1542 | WP_082241845.1 | hypothetical protein | - |
| NHU_RS21380 () | 84826..85866 | - | 1041 | WP_060836741.1 | iron chelate uptake ABC transporter family permease subunit | - |
| NHU_RS21385 () | 85863..86855 | - | 993 | WP_060836742.1 | iron ABC transporter permease | - |
| NHU_RS21390 () | 86860..87795 | - | 936 | WP_060836743.1 | Fe2+-enterobactin ABC transporter substrate-binding protein | - |
| NHU_RS21395 () | 87792..89150 | - | 1359 | WP_082241846.1 | hypothetical protein | - |
| NHU_RS21400 () | 89177..93520 | - | 4344 | WP_060836744.1 | AMP-binding protein | - |
| NHU_RS21405 () | 93697..95307 | + | 1611 | WP_060836745.1 | (2,3-dihydroxybenzoyl)adenylate synthase | - |
| NHU_RS21410 () | 95329..95580 | + | 252 | WP_060836746.1 | hypothetical protein | - |
| NHU_RS21415 () | 95573..96247 | + | 675 | WP_060836747.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| NHU_RS21420 () | 96214..96984 | - | 771 | WP_060836748.1 | SDR family oxidoreductase | - |
| NHU_RS21425 () | 96975..97628 | - | 654 | WP_060836749.1 | isochorismatase family protein | - |
| NHU_RS21430 () | 97632..98879 | - | 1248 | WP_082241843.1 | isochorismate synthase | - |
| NHU_RS21435 () | 99325..101406 | + | 2082 | WP_060836750.1 | TonB-dependent receptor | - |
| NHU_RS21440 () | 101769..102083 | + | 315 | WP_060836751.1 | hypothetical protein | - |
| NHU_RS21445 () | 102147..103175 | + | 1029 | WP_060836752.1 | IS110 family transposase | - |
| NHU_RS21450 () | 103274..103519 | + | 246 | Protein_83 | AAA family ATPase | - |
| NHU_RS21455 () | 103951..104340 | - | 390 | WP_060836753.1 | hypothetical protein | - |
| NHU_RS21465 () | 104339..105603 | + | 1265 | Protein_85 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|