MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 102801 bp
Accession: NC_022806 Location: 5021959..5124759 Organism: Pseudomonas aeruginosa PA1R Replicon: chromosome
Accession: NC_022806 Location: 5021959..5124759 Organism: Pseudomonas aeruginosa PA1R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA1R_RS23155 () | 5017620..5018918 | + | 1299 | WP_003086128.1 | Tol-Pal system protein TolB | - |
| PA1R_RS23160 () | 5018971..5019477 | + | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| PA1R_RS23165 () | 5019487..5020311 | + | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| PA1R_RS23170 () | 5020531..5021178 | + | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| PA1R_RS23175 () | 5021194..5021868 | + | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| PA1R_RS23185 () | 5022373..5023662 | - | 1290 | WP_023518400.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PA1R_RS23190 () | 5023659..5025578 | - | 1920 | WP_043487124.1 | helicase/relaxase domain-containing protein | - |
| PA1R_RS23195 () | 5025930..5027801 | + | 1872 | WP_023518402.1 | AAA family ATPase | - |
| PA1R_RS23200 () | 5027798..5029510 | + | 1713 | WP_023518403.1 | ATP-dependent helicase | - |
| PA1R_RS23205 () | 5029894..5030244 | - | 351 | WP_023518404.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PA1R_RS23210 () | 5030248..5030520 | - | 273 | WP_023518405.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PA1R_RS23215 () | 5030988..5032502 | - | 1515 | WP_023518406.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PA1R_RS23220 () | 5032499..5032846 | - | 348 | WP_003117086.1 | hypothetical protein | - |
| PA1R_RS23225 () | 5032846..5034234 | - | 1389 | WP_043487126.1 | integrating conjugative element protein | - |
| PA1R_RS23230 () | 5034252..5035190 | - | 939 | WP_023518408.1 | TIGR03756 family integrating conjugative element protein | - |
| PA1R_RS23235 () | 5035190..5035621 | - | 432 | WP_023518409.1 | TIGR03757 family integrating conjugative element protein | - |
| PA1R_RS23240 () | 5035830..5036048 | + | 219 | WP_003158150.1 | hypothetical protein | - |
| PA1R_RS23245 () | 5036045..5036701 | - | 657 | WP_043487129.1 | DsbA family protein | - |
| PA1R_RS23250 () | 5036698..5036982 | - | 285 | WP_003086159.1 | hypothetical protein | - |
| PA1R_RS23255 () | 5036979..5039921 | - | 2943 | WP_023518410.1 | conjugative transfer ATPase | - |
| PA1R_RS23260 () | 5039921..5040364 | - | 444 | WP_023518411.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PA1R_RS23265 () | 5040342..5041847 | - | 1506 | WP_023518412.1 | TIGR03752 family integrating conjugative element protein | - |
| PA1R_RS23270 () | 5041831..5042715 | - | 885 | WP_043487135.1 | TIGR03749 family integrating conjugative element protein | - |
| PA1R_RS23275 () | 5042712..5043371 | - | 660 | WP_023518414.1 | TIGR03746 family integrating conjugative element protein | - |
| PA1R_RS23280 () | 5043368..5043754 | - | 387 | WP_043487137.1 | TIGR03750 family conjugal transfer protein | - |
| PA1R_RS23285 () | 5043765..5044121 | - | 357 | WP_003109398.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PA1R_RS23290 () | 5044139..5044378 | - | 240 | WP_033867399.1 | TIGR03758 family integrating conjugative element protein | - |
| PA1R_RS23295 () | 5044375..5044713 | - | 339 | WP_031670627.1 | RAQPRD family integrative conjugative element protein | - |
| PA1R_RS23300 () | 5044807..5045115 | - | 309 | WP_023518418.1 | aconitase | - |
| PA1R_RS23305 () | 5045357..5046385 | + | 1029 | WP_049859657.1 | ABC transporter substrate-binding protein | - |
| PA1R_RS23310 () | 5046400..5047183 | + | 784 | Protein_4609 | ABC transporter permease subunit | - |
| PA1R_RS23315 () | 5047180..5047968 | + | 789 | WP_023518421.1 | Taurine import ATP-binding protein TauB | VF |
| PA1R_RS23320 () | 5047965..5049224 | + | 1260 | WP_023518422.1 | NnrS family protein | - |
| PA1R_RS23325 () | 5049243..5050022 | - | 780 | WP_079279915.1 | Crp/Fnr family transcriptional regulator | - |
| PA1R_RS23330 () | 5050232..5051602 | - | 1371 | WP_023518424.1 | DUF560 domain-containing protein | - |
| PA1R_RS23335 () | 5051830..5052711 | - | 882 | WP_023518425.1 | hypothetical protein | - |
| PA1R_RS23340 () | 5052783..5056088 | - | 3306 | WP_023518426.1 | TonB-dependent receptor | - |
| PA1R_RS23345 () | 5056278..5057024 | - | 747 | WP_023518427.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PA1R_RS23350 () | 5057024..5059255 | - | 2232 | WP_023518428.1 | type IV conjugative transfer system coupling protein TraD | - |
| PA1R_RS23355 () | 5059259..5059438 | - | 180 | WP_043487145.1 | hypothetical protein | - |
| PA1R_RS23360 () | 5059447..5059947 | - | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| PA1R_RS23365 () | 5059944..5060525 | - | 582 | WP_023518429.1 | hypothetical protein | - |
| PA1R_RS23370 () | 5060510..5061265 | - | 756 | WP_023518430.1 | TIGR03759 family integrating conjugative element protein | - |
| PA1R_RS23375 () | 5061276..5061956 | - | 681 | WP_049859661.1 | hypothetical protein | - |
| PA1R_RS29355 () | 5062716..5063354 | - | 639 | WP_049859665.1 | TetR/AcrR family transcriptional regulator | - |
| PA1R_RS29360 () | 5063989..5064717 | + | 729 | WP_049859666.1 | SDR family oxidoreductase | - |
| PA1R_RS30145 () | 5065039..5065575 | + | 537 | WP_079279916.1 | hypothetical protein | - |
| PA1R_RS30150 () | 5065592..5066452 | + | 861 | WP_079279917.1 | Cytolethal distending toxin subunit B | VF |
| PA1R_RS23385 () | 5067552..5067827 | - | 276 | WP_023102603.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PA1R_RS23390 () | 5067827..5068099 | - | 273 | WP_023102602.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PA1R_RS23395 () | 5068352..5068912 | + | 561 | WP_023102601.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| PA1R_RS30680 () | 5068969..5069304 | - | 336 | WP_185832033.1 | hypothetical protein | - |
| PA1R_RS23400 () | 5069726..5070391 | - | 666 | WP_049859794.1 | DUF3218 family protein | - |
| PA1R_RS30165 () | 5070402..5071433 | - | 1032 | WP_043487154.1 | hypothetical protein | - |
| PA1R_RS23410 () | 5071685..5074651 | + | 2967 | WP_023518433.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| PA1R_RS23415 () | 5074658..5075848 | + | 1191 | WP_043487156.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PA1R_RS23420 () | 5075996..5076430 | + | 435 | WP_169433239.1 | hypothetical protein | - |
| PA1R_RS23425 () | 5076532..5078781 | - | 2250 | WP_023518435.1 | DEAD/DEAH box helicase | - |
| PA1R_RS23430 () | 5078886..5080331 | - | 1446 | WP_023518436.1 | class I SAM-dependent methyltransferase | - |
| PA1R_RS23435 () | 5080361..5080966 | - | 606 | WP_003125296.1 | hypothetical protein | - |
| PA1R_RS23440 () | 5081059..5081313 | - | 255 | WP_003117062.1 | hypothetical protein | - |
| PA1R_RS23445 () | 5081381..5081743 | - | 363 | WP_003117061.1 | hypothetical protein | - |
| PA1R_RS23450 () | 5081813..5082088 | - | 276 | WP_023518437.1 | hypothetical protein | - |
| PA1R_RS23455 () | 5082085..5082717 | - | 633 | WP_023518438.1 | DUF3275 family protein | - |
| PA1R_RS23460 () | 5082774..5083124 | - | 351 | WP_004347949.1 | hypothetical protein | - |
| PA1R_RS23465 () | 5083360..5084067 | - | 708 | WP_033992394.1 | hypothetical protein | - |
| PA1R_RS23470 () | 5084552..5084749 | - | 198 | WP_015503588.1 | hypothetical protein | - |
| PA1R_RS30685 () | 5084823..5084981 | - | 159 | WP_003109368.1 | hypothetical protein | - |
| PA1R_RS23475 () | 5085119..5085598 | - | 480 | WP_023518439.1 | DUF3577 domain-containing protein | - |
| PA1R_RS30690 () | 5086059..5086235 | - | 177 | WP_015503587.1 | hypothetical protein | - |
| PA1R_RS30695 () | 5086310..5086555 | - | 246 | WP_003123340.1 | hypothetical protein | - |
| PA1R_RS23490 () | 5087621..5088058 | - | 438 | WP_023518440.1 | hypothetical protein | VF |
| PA1R_RS23495 () | 5088087..5089415 | - | 1329 | WP_004352824.1 | hypothetical protein | VF |
| PA1R_RS23500 () | 5089420..5090361 | - | 942 | WP_079279919.1 | Flp pilus assembly complex ATPase component TadA | - |
| PA1R_RS23505 () | 5090358..5090888 | - | 531 | WP_023518442.1 | hypothetical protein | VF |
| PA1R_RS23510 () | 5090910..5091989 | - | 1080 | WP_023518443.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PA1R_RS23515 () | 5091989..5093569 | - | 1581 | WP_023101572.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| PA1R_RS23520 () | 5093578..5094111 | - | 534 | WP_023104012.1 | type IV pilus biogenesis protein PilP | - |
| PA1R_RS23525 () | 5094101..5095426 | - | 1326 | WP_023518445.1 | type 4b pilus protein PilO2 | - |
| PA1R_RS23530 () | 5095430..5097139 | - | 1710 | WP_003123331.1 | Outer membrane lipoprotein BfpB | VF |
| PA1R_RS23535 () | 5097139..5098263 | - | 1125 | WP_043487165.1 | hypothetical protein | VF |
| PA1R_RS30175 () | 5098807..5101161 | + | 2355 | WP_194736250.1 | S-type pyocin domain-containing protein | - |
| PA1R_RS30535 () | 5101161..5101628 | + | 468 | WP_126589954.1 | pyocin S2 immunity protein | - |
| PA1R_RS30540 () | 5101860..5102393 | - | 534 | WP_126589955.1 | hypothetical protein | - |
| PA1R_RS23545 () | 5102736..5104667 | - | 1932 | Protein_4663 | DEAD/DEAH box helicase | - |
| PA1R_RS23550 () | 5104664..5106553 | - | 1890 | WP_023518449.1 | hypothetical protein | - |
| PA1R_RS23555 () | 5106875..5107627 | - | 753 | WP_023518450.1 | hypothetical protein | - |
| PA1R_RS23560 () | 5107635..5109554 | - | 1920 | WP_043487167.1 | type IA DNA topoisomerase | - |
| PA1R_RS30545 () | 5109669..5109788 | - | 120 | WP_194736251.1 | CrpP family protein | - |
| PA1R_RS23565 () | 5109882..5110076 | - | 195 | WP_033995542.1 | hypothetical protein | - |
| PA1R_RS23570 () | 5110180..5110668 | - | 489 | WP_023518452.1 | single-stranded DNA-binding protein | - |
| PA1R_RS23575 () | 5110698..5111540 | - | 843 | WP_023518453.1 | Rha family transcriptional regulator | - |
| PA1R_RS23580 () | 5111588..5112136 | - | 549 | WP_043487169.1 | DUF3158 family protein | - |
| PA1R_RS23585 () | 5112142..5112870 | - | 729 | WP_023518455.1 | TIGR03761 family integrating conjugative element protein | - |
| PA1R_RS23590 () | 5113027..5113224 | - | 198 | WP_003105756.1 | hypothetical protein | - |
| PA1R_RS30550 () | 5113253..5113402 | + | 150 | WP_153562303.1 | hypothetical protein | - |
| PA1R_RS30185 () | 5113567..5114892 | - | 1326 | WP_023518456.1 | hypothetical protein | - |
| PA1R_RS23600 () | 5114889..5115656 | - | 768 | WP_003134101.1 | DUF2857 domain-containing protein | - |
| PA1R_RS23605 () | 5115684..5117420 | - | 1737 | WP_023518457.1 | ParB family protein | - |
| PA1R_RS23610 () | 5117417..5117665 | - | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| PA1R_RS23615 () | 5117668..5118684 | - | 1017 | WP_023518458.1 | nucleoid-associated protein YejK | - |
| PA1R_RS23620 () | 5118684..5118917 | - | 234 | WP_023518459.1 | hypothetical protein | - |
| PA1R_RS30555 () | 5118910..5119407 | - | 498 | WP_144426470.1 | hypothetical protein | - |
| PA1R_RS23630 () | 5119400..5119654 | - | 255 | WP_023518460.1 | hypothetical protein | - |
| PA1R_RS23635 () | 5119651..5120178 | - | 528 | WP_003117030.1 | hypothetical protein | - |
| PA1R_RS23645 () | 5120350..5121696 | - | 1347 | WP_003122067.1 | replicative DNA helicase | - |
| PA1R_RS23650 () | 5121815..5122516 | - | 702 | WP_023518461.1 | DUF2786 domain-containing protein | - |
| PA1R_RS23655 () | 5122522..5123019 | - | 498 | WP_003111783.1 | hypothetical protein | - |
| PA1R_RS23660 () | 5123016..5123753 | - | 738 | WP_003117024.1 | hypothetical protein | - |
| PA1R_RS23665 () | 5123755..5124621 | - | 867 | WP_023518463.1 | ParA family protein | - |
| PA1R_RS23670 () | 5125146..5125550 | + | 405 | WP_003112559.1 | acyl-CoA thioesterase | - |
| PA1R_RS23675 () | 5125671..5126231 | - | 561 | WP_003117022.1 | hypothetical protein | - |
| PA1R_RS23680 () | 5126616..5127254 | - | 639 | WP_003120654.1 | NUDIX hydrolase | - |
| PA1R_RS23685 () | 5127839..5128216 | + | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| PA1R_RS23690 () | 5128659..5129270 | + | 612 | WP_004348355.1 | type 1 fimbrial protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Pseudomonas aeruginosa PA1 | Integrative and Conjugative Element | TA30325 | NC_022808 | 4518241..4621030 | 0 |