MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NC_022364 Location: 4543610..4552960 Organism: Escherichia coli LY180 Replicon: chromosome
Accession: NC_022364 Location: 4543610..4552960 Organism: Escherichia coli LY180 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LY180_RS22410 () | 4540341..4541060 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| LY180_RS22415 () | 4541057..4542688 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| LY180_RS22420 () | 4542869..4543099 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| LY180_RS22425 () | 4543111..4543383 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| LY180_RS22435 () | 4543610..4543906 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| LY180_RS22440 () | 4543934..4544107 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| LY180_RS22445 () | 4544226..4545743 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| LY180_RS22450 () | 4545980..4547437 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| LY180_RS22455 () | 4547496..4549643 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| LY180_RS22460 () | 4549723..4551057 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| LY180_RS22465 () | 4551422..4552960 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| LY180_RS22475 () | 4553759..4554334 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| LY180_RS22480 () | 4554371..4556068 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| LY180_RS22485 () | 4556044..4556382 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| LY180_RS22490 () | 4556498..4557799 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68443 | NZ_CP017979 | 4248154..4261393 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0 |