MGE detailed information
MGE type: IScluster/Tn MGE length: 7722 bp
Accession: NC_021819 Location: 55162..62883 Organism: Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 Replicon: plasmid unnamed
Accession: NC_021819 Location: 55162..62883 Organism: Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFSAN002050_RS27340 () | 50420..50914 | - | 495 | WP_071685143.1 | hypothetical protein | - |
| CFSAN002050_RS25300 () | 51084..51290 | - | 207 | WP_000134171.1 | hypothetical protein | - |
| CFSAN002050_RS25305 () | 51351..52676 | - | 1326 | WP_020833804.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| CFSAN002050_RS25310 () | 52681..52974 | - | 294 | WP_024143021.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| CFSAN002050_RS25315 () | 53375..54727 | - | 1353 | WP_049827791.1 | hypothetical protein | - |
| CFSAN002050_RS25325 () | 54809..56049 | + | 1241 | Protein_56 | IS3 family transposase ISEc25 | Transposase |
| CFSAN002050_RS25330 () | 56169..56456 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CFSAN002050_RS25335 () | 56456..56695 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CFSAN002050_RS25340 () | 56958..57881 | - | 924 | WP_000167917.1 | cation diffusion facilitator family transporter | - |
| CFSAN002050_RS25345 () | 58081..58653 | - | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| CFSAN002050_RS25350 () | 59129..60367 | - | 1239 | WP_003030308.1 | IS110 family transposase ISCps4 | Transposase |
| CFSAN002050_RS25355 () | 60747..61769 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| CFSAN002050_RS27355 () | 62060..62428 | + | 369 | Protein_63 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| CFSAN002050_RS27365 () | 62752..63456 | - | 705 | Protein_64 | IS6-like element IS26 family transposase | - |
| CFSAN002050_RS25375 () | 63685..64818 | - | 1134 | WP_024143024.1 | AraC family transcriptional regulator | - |
| CFSAN002050_RS25380 () | 65047..65653 | + | 607 | Protein_66 | hypothetical protein | - |
| CFSAN002050_RS25385 () | 65989..66420 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| CFSAN002050_RS25390 () | 66564..66914 | + | 351 | WP_000694954.1 | DUF305 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|