MGE detailed information
MGE type: Genomic_island MGE length: 26530 bp
Accession: NC_020815 Location: 2300855..2327384 Organism: Xanthomonas citri subsp. citri Aw12879 Replicon: chromosome
Accession: NC_020815 Location: 2300855..2327384 Organism: Xanthomonas citri subsp. citri Aw12879 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XCAW_RS10010 () | 2297777..2297953 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| XCAW_RS10015 () | 2298173..2298574 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| XCAW_RS10025 () | 2298863..2299954 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| XCAW_RS10035 () | 2300855..2303026 | + | 2172 | WP_015472108.1 | DotA/TraY family protein | - |
| XCAW_RS10040 () | 2303036..2303557 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| XCAW_RS26615 () | 2304422..2305378 | - | 957 | WP_011051571.1 | hypothetical protein | - |
| XCAW_RS10050 () | 2305445..2306578 | - | 1134 | Protein_1974 | IS5 family transposase | - |
| XCAW_RS10055 () | 2306618..2307705 | - | 1088 | Protein_1975 | IS3 family transposase | - |
| XCAW_RS10065 () | 2307918..2308097 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| XCAW_RS10070 () | 2308368..2308682 | - | 315 | WP_015463310.1 | hypothetical protein | - |
| XCAW_RS10075 () | 2308685..2308975 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XCAW_RS10080 () | 2308963..2309241 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| XCAW_RS10085 () | 2309411..2310679 | - | 1269 | Protein_1980 | transposase | - |
| XCAW_RS10095 () | 2310728..2311953 | + | 1226 | Protein_1981 | IS3 family transposase | - |
| XCAW_RS10100 () | 2312572..2313528 | + | 957 | WP_015472114.1 | recombinase family protein | - |
| XCAW_RS10105 () | 2313718..2315826 | + | 2109 | WP_015472116.1 | AAA family ATPase | - |
| XCAW_RS10110 () | 2315877..2316065 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| XCAW_RS10115 () | 2316062..2317648 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| XCAW_RS10120 () | 2317645..2318562 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| XCAW_RS10125 () | 2318571..2318900 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| XCAW_RS10130 () | 2319004..2319414 | + | 411 | WP_015472117.1 | plasmid pRiA4b ORF-3 family protein | - |
| XCAW_RS26620 () | 2319437..2319613 | - | 177 | WP_015463318.1 | hypothetical protein | - |
| XCAW_RS24370 () | 2319806..2320006 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| XCAW_RS10140 () | 2320567..2320827 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| XCAW_RS10145 () | 2321226..2322227 | - | 1002 | WP_011051588.1 | replication protein | - |
| XCAW_RS10150 () | 2322460..2322693 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| XCAW_RS10155 () | 2323280..2324674 | + | 1395 | WP_011051590.1 | SIR2 family protein | - |
| XCAW_RS10160 () | 2324671..2326788 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| XCAW_RS26385 () | 2327208..2327384 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| XCAW_RS10170 () | 2327667..2328773 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| XCAW_RS10175 () | 2328816..2329325 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| XCAW_RS10180 () | 2329337..2330995 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| XCAW_RS10185 () | 2331306..2331911 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.001 |