MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 164114 bp
Accession: NC_019959 Location: 1..164114 Organism: Mycobacterium smegmatis JS623 Replicon: plasmid pMYCSM03
Accession: NC_019959 Location: 1..164114 Organism: Mycobacterium smegmatis JS623 Replicon: plasmid pMYCSM03
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYCSM_RS34200 () | 25..306 | - | 282 | WP_015298118.1 | hypothetical protein | - |
| MYCSM_RS34205 () | 303..719 | - | 417 | WP_015298119.1 | WhiB family transcriptional regulator | - |
| MYCSM_RS34210 () | 779..1411 | - | 633 | WP_015298120.1 | hypothetical protein | - |
| MYCSM_RS34215 () | 1408..1743 | - | 336 | WP_015298121.1 | WhiB family transcriptional regulator | - |
| MYCSM_RS34220 () | 1740..2276 | - | 537 | WP_015298122.1 | hypothetical protein | - |
| MYCSM_RS34225 () | 2273..2620 | - | 348 | WP_157681641.1 | hypothetical protein | - |
| MYCSM_RS34230 () | 2824..3558 | - | 735 | WP_015298124.1 | hypothetical protein | - |
| MYCSM_RS34235 () | 3694..4140 | + | 447 | WP_041316203.1 | helix-turn-helix transcriptional regulator | - |
| MYCSM_RS34240 () | 4527..5108 | + | 582 | WP_015298126.1 | DNA polymerase III subunit epsilon | - |
| MYCSM_RS34245 () | 5161..5472 | + | 312 | WP_041316205.1 | hypothetical protein | - |
| MYCSM_RS34250 () | 5469..6185 | + | 717 | WP_015298128.1 | HNH endonuclease family protein | - |
| MYCSM_RS34255 () | 6312..7022 | + | 711 | WP_015298130.1 | hypothetical protein | - |
| MYCSM_RS34260 () | 7068..7775 | + | 708 | WP_041316208.1 | hypothetical protein | - |
| MYCSM_RS34265 () | 7855..8808 | + | 954 | WP_015298132.1 | hypothetical protein | - |
| MYCSM_RS34270 () | 8829..9413 | + | 585 | WP_157681642.1 | uracil-DNA glycosylase | - |
| MYCSM_RS34275 () | 9437..12442 | - | 3006 | WP_015298134.1 | ATP-binding protein | - |
| MYCSM_RS34280 () | 12483..15218 | - | 2736 | WP_015298135.1 | DUF1156 domain-containing protein | - |
| MYCSM_RS34285 () | 15215..18424 | - | 3210 | WP_015298136.1 | DUF3883 domain-containing protein | - |
| MYCSM_RS34290 () | 18821..19570 | - | 750 | WP_015298137.1 | hypothetical protein | - |
| MYCSM_RS34295 () | 19567..21417 | - | 1851 | WP_015298138.1 | hypothetical protein | - |
| MYCSM_RS34300 () | 21404..21832 | - | 429 | WP_015298139.1 | hypothetical protein | - |
| MYCSM_RS34305 () | 21983..22432 | + | 450 | WP_015298140.1 | hypothetical protein | - |
| MYCSM_RS34310 () | 22533..22928 | + | 396 | WP_041316244.1 | hypothetical protein | - |
| MYCSM_RS34315 () | 22928..23215 | + | 288 | WP_015298142.1 | hypothetical protein | - |
| MYCSM_RS34320 () | 23359..23589 | + | 231 | WP_157681633.1 | hypothetical protein | - |
| MYCSM_RS34325 () | 23607..26192 | - | 2586 | WP_015298144.1 | DEAD/DEAH box helicase | - |
| MYCSM_RS34330 () | 26399..26596 | - | 198 | WP_015298145.1 | hypothetical protein | - |
| MYCSM_RS34340 () | 26778..27791 | + | 1014 | WP_015298146.1 | hypothetical protein | - |
| MYCSM_RS37625 () | 28129..28416 | + | 288 | WP_041316247.1 | Meromycolate extension acyl carrier protein | VF |
| MYCSM_RS34350 () | 28420..28902 | + | 483 | WP_015298148.1 | hypothetical protein | - |
| MYCSM_RS34355 () | 28997..29314 | + | 318 | WP_015298149.1 | hypothetical protein | - |
| MYCSM_RS34360 () | 29301..29705 | + | 405 | WP_015298150.1 | hypothetical protein | - |
| MYCSM_RS34365 () | 29833..30474 | - | 642 | WP_015298152.1 | hypothetical protein | - |
| MYCSM_RS34370 () | 30471..30794 | - | 324 | WP_015298153.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| MYCSM_RS34375 () | 30791..31033 | - | 243 | WP_015298154.1 | hypothetical protein | Antitoxin Detail |
| MYCSM_RS34380 () | 31081..31278 | - | 198 | WP_015298155.1 | hypothetical protein | - |
| MYCSM_RS34385 () | 31473..32675 | + | 1203 | WP_041316218.1 | hypothetical protein | - |
| MYCSM_RS34390 () | 32700..32984 | - | 285 | WP_157681635.1 | hypothetical protein | - |
| MYCSM_RS34395 () | 33061..33291 | + | 231 | WP_015298158.1 | hypothetical protein | - |
| MYCSM_RS34400 () | 33292..33555 | + | 264 | WP_015298159.1 | hypothetical protein | - |
| MYCSM_RS34405 () | 33797..34171 | - | 375 | WP_015298160.1 | hypothetical protein | - |
| MYCSM_RS34410 () | 34177..34761 | - | 585 | WP_015298161.1 | hypothetical protein | - |
| MYCSM_RS34415 () | 34774..37143 | - | 2370 | WP_157681643.1 | hypothetical protein | - |
| MYCSM_RS34425 () | 37944..38552 | - | 609 | WP_015298164.1 | hypothetical protein | - |
| MYCSM_RS34430 () | 38588..38947 | - | 360 | WP_015298165.1 | hypothetical protein | - |
| MYCSM_RS34435 () | 39110..39538 | + | 429 | WP_157681636.1 | hypothetical protein | - |
| MYCSM_RS34440 () | 39760..41247 | - | 1488 | WP_015298167.1 | IS607 family transposase ISBlo12 | Transposase |
| MYCSM_RS34445 () | 41554..41763 | + | 210 | WP_198345152.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| MYCSM_RS37970 () | 41760..41921 | - | 162 | WP_015298169.1 | hypothetical protein | - |
| MYCSM_RS34450 () | 41950..42211 | - | 262 | Protein_49 | hypothetical protein | - |
| MYCSM_RS34455 () | 42566..42919 | - | 354 | WP_015298171.1 | hypothetical protein | - |
| MYCSM_RS34460 () | 42977..43654 | - | 678 | WP_083906460.1 | phosphoserine phosphatase SerB | - |
| MYCSM_RS34465 () | 43771..44196 | - | 426 | WP_015298172.1 | hypothetical protein | - |
| MYCSM_RS34470 () | 44210..44686 | - | 477 | WP_015298173.1 | DUF2580 domain-containing protein | - |
| MYCSM_RS34475 () | 44804..45055 | - | 252 | WP_015298174.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| MYCSM_RS34480 () | 45103..45306 | + | 204 | WP_041316222.1 | hypothetical protein | Antitoxin Detail |
| MYCSM_RS34485 () | 45303..45683 | + | 381 | WP_015298176.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| MYCSM_RS37635 () | 45731..46492 | - | 762 | WP_041316259.1 | hypothetical protein | - |
| MYCSM_RS34500 () | 47430..47657 | - | 228 | WP_015298178.1 | hypothetical protein | - |
| MYCSM_RS34505 () | 47810..49561 | + | 1752 | WP_015298179.1 | Serine/threonine-protein kinase PknJ | VF |
| MYCSM_RS37645 () | 49591..49773 | + | 183 | WP_157681644.1 | hypothetical protein | - |
| MYCSM_RS34510 () | 49782..50840 | - | 1059 | WP_198345153.1 | non-homologous end-joining DNA ligase | - |
| MYCSM_RS34515 () | 51096..52097 | - | 1002 | WP_015298182.1 | ESX-3 secretion system protein EccC3 | VF |
| MYCSM_RS34520 () | 52306..53226 | - | 921 | WP_015298183.1 | discoidin domain-containing protein | - |
| MYCSM_RS34525 () | 53229..53615 | - | 387 | WP_015298184.1 | hypothetical protein | - |
| MYCSM_RS34530 () | 53612..54016 | - | 405 | WP_015298185.1 | PIN domain-containing protein | Toxin Detail |
| MYCSM_RS34535 () | 54013..54276 | - | 264 | WP_041316263.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| MYCSM_RS34540 () | 54863..55174 | - | 312 | WP_015298187.1 | hypothetical protein | - |
| MYCSM_RS34545 () | 55227..56585 | - | 1359 | WP_015298188.1 | cutinase family protein | - |
| MYCSM_RS34550 () | 56582..57298 | - | 717 | WP_015298189.1 | hypothetical protein | - |
| MYCSM_RS34555 () | 57890..58090 | + | 201 | WP_015298190.1 | hypothetical protein | - |
| MYCSM_RS34560 () | 58084..59097 | + | 1014 | WP_015298191.1 | conjugal transfer protein | - |
| MYCSM_RS34565 () | 59101..59418 | + | 318 | WP_015298192.1 | hypothetical protein | - |
| MYCSM_RS34570 () | 59467..59991 | + | 525 | WP_015298193.1 | hypothetical protein | - |
| MYCSM_RS34575 () | 60024..62525 | + | 2502 | WP_015298194.1 | ATP-binding protein | - |
| MYCSM_RS34580 () | 62522..63175 | + | 654 | WP_015298195.1 | hypothetical protein | - |
| MYCSM_RS34585 () | 63172..65013 | + | 1842 | WP_015298196.1 | hypothetical protein | - |
| MYCSM_RS34590 () | 65085..65714 | + | 630 | WP_015298197.1 | hypothetical protein | - |
| MYCSM_RS36645 () | 65765..66922 | + | 1158 | WP_157681638.1 | Peptidoglycan endopeptidase RipB | VF |
| MYCSM_RS34600 () | 66939..67604 | + | 666 | WP_015298199.1 | hypothetical protein | - |
| MYCSM_RS34605 () | 67604..70369 | + | 2766 | WP_015298200.1 | cell division protein FtsK | - |
| MYCSM_RS34610 () | 70385..70777 | + | 393 | WP_015298201.1 | hypothetical protein | - |
| MYCSM_RS34615 () | 70779..70976 | + | 198 | WP_015298202.1 | hypothetical protein | - |
| MYCSM_RS34620 () | 70973..71911 | + | 939 | WP_015298203.1 | hypothetical protein | - |
| MYCSM_RS34625 () | 71934..73913 | + | 1980 | WP_015298204.1 | hypothetical protein | - |
| MYCSM_RS34630 () | 73938..74174 | + | 237 | WP_041316276.1 | hypothetical protein | - |
| MYCSM_RS35625 () | 74179..74853 | + | 675 | WP_015298206.1 | Protein of unknown function (DUF2580) | - |
| MYCSM_RS34640 () | 75022..75465 | + | 444 | WP_015298207.1 | hypothetical protein | - |
| MYCSM_RS34645 () | 75699..76550 | + | 852 | WP_015298208.1 | DUF2580 domain-containing protein | - |
| MYCSM_RS34650 () | 76600..78216 | + | 1617 | WP_015298209.1 | hypothetical protein | - |
| MYCSM_RS34655 () | 78369..78677 | + | 309 | WP_015298210.1 | hypothetical protein | - |
| MYCSM_RS34660 () | 78674..80518 | + | 1845 | WP_015298211.1 | ESX-3 secretion system protein EccA3 | VF |
| MYCSM_RS34665 () | 80515..82029 | + | 1515 | WP_015298212.1 | ESX-3 secretion system ATPase EccB3 | VF |
| MYCSM_RS34670 () | 82046..86266 | + | 4221 | WP_015298213.1 | ESX-3 secretion system protein EccC3 | VF |
| MYCSM_RS34675 () | 86447..86761 | + | 315 | WP_015298214.1 | PE family immunomodulator PE5 | VF |
| MYCSM_RS34680 () | 86779..88143 | + | 1365 | WP_015298215.1 | PPE family protein PPE4 | VF |
| MYCSM_RS34685 () | 88243..88572 | + | 330 | WP_015298216.1 | ESAT-6-like protein EsxG | VF |
| MYCSM_RS34690 () | 88620..88907 | + | 288 | WP_015298217.1 | ESAT-6-like protein EsxH | VF |
| MYCSM_RS34695 () | 89067..89720 | + | 654 | WP_015298218.1 | TetR/AcrR family transcriptional regulator | - |
| MYCSM_RS34700 () | 89913..91454 | - | 1542 | WP_041316227.1 | hypothetical protein | - |
| MYCSM_RS34705 () | 91513..92916 | - | 1404 | WP_015298220.1 | Mycosin-3 | VF |
| MYCSM_RS34710 () | 92916..94328 | - | 1413 | WP_015298221.1 | ESX-3 secretion system protein EccD3 | VF |
| MYCSM_RS34715 () | 94331..95941 | - | 1611 | WP_041316230.1 | AAA family ATPase | - |
| MYCSM_RS34720 () | 95972..96802 | - | 831 | WP_015298223.1 | ESX-3 secretion-associated protein EspG3 | VF |
| MYCSM_RS34725 () | 96795..97043 | - | 249 | WP_015298224.1 | hypothetical protein | - |
| MYCSM_RS34730 () | 97604..99268 | + | 1665 | WP_015298225.1 | ParB/RepB/Spo0J family partition protein | - |
| MYCSM_RS34735 () | 99395..100267 | + | 873 | WP_015298226.1 | Chromosome partitioning protein ParA | VF |
| MYCSM_RS34740 () | 100260..100514 | + | 255 | WP_015298227.1 | 50S ribosomal protein L7ae | - |
| MYCSM_RS34745 () | 100625..101854 | + | 1230 | WP_015298228.1 | hypothetical protein | - |
| MYCSM_RS34750 () | 102006..102365 | + | 360 | WP_051074019.1 | hypothetical protein | - |
| MYCSM_RS34755 () | 102365..103930 | + | 1566 | WP_015298230.1 | hypothetical protein | - |
| MYCSM_RS34760 () | 104000..104335 | - | 336 | WP_015298231.1 | hypothetical protein | - |
| MYCSM_RS34765 () | 104800..105195 | + | 396 | WP_015298232.1 | hypothetical protein | - |
| MYCSM_RS34770 () | 105192..108377 | + | 3186 | WP_015298233.1 | hypothetical protein | - |
| MYCSM_RS34775 () | 108377..109096 | + | 720 | WP_015298234.1 | hypothetical protein | - |
| MYCSM_RS34780 () | 109093..109758 | + | 666 | WP_015298235.1 | hypothetical protein | - |
| MYCSM_RS34785 () | 109768..110196 | + | 429 | WP_015298236.1 | hypothetical protein | - |
| MYCSM_RS34790 () | 110249..110980 | - | 732 | WP_015298237.1 | hypothetical protein | - |
| MYCSM_RS34795 () | 110989..111855 | - | 867 | WP_015298238.1 | hypothetical protein | - |
| MYCSM_RS34800 () | 111852..112319 | - | 468 | WP_015298239.1 | hypothetical protein | - |
| MYCSM_RS34805 () | 112371..113018 | - | 648 | WP_015298240.1 | hypothetical protein | - |
| MYCSM_RS34810 () | 113087..113557 | + | 471 | WP_015298241.1 | hypothetical protein | - |
| MYCSM_RS34815 () | 113686..114684 | - | 999 | WP_198345150.1 | hypothetical protein | - |
| MYCSM_RS34820 () | 115295..116293 | + | 999 | WP_083906461.1 | TauD/TfdA family dioxygenase | - |
| MYCSM_RS34825 () | 116431..117318 | + | 888 | WP_015298244.1 | hypothetical protein | - |
| MYCSM_RS34830 () | 117318..117740 | + | 423 | WP_015298245.1 | hypothetical protein | - |
| MYCSM_RS34835 () | 117737..118576 | + | 840 | WP_015298246.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| MYCSM_RS34840 () | 118573..118962 | + | 390 | WP_015298247.1 | hypothetical protein | - |
| MYCSM_RS34845 () | 119052..119897 | + | 846 | WP_015298248.1 | hypothetical protein | - |
| MYCSM_RS34850 () | 120103..120921 | + | 819 | WP_015298249.1 | DUF4262 domain-containing protein | - |
| MYCSM_RS34855 () | 120990..121350 | + | 361 | Protein_130 | hypothetical protein | - |
| MYCSM_RS34860 () | 121574..122680 | + | 1107 | WP_015298251.1 | AAA family ATPase | - |
| MYCSM_RS34865 () | 122677..123936 | + | 1260 | WP_015298252.1 | hypothetical protein | - |
| MYCSM_RS34870 () | 123933..124133 | + | 201 | WP_015298253.1 | hypothetical protein | - |
| MYCSM_RS34875 () | 124130..125350 | + | 1221 | WP_015298254.1 | hypothetical protein | - |
| MYCSM_RS34880 () | 125352..126677 | + | 1326 | WP_015298255.1 | DNA2/NAM7 family helicase | - |
| MYCSM_RS34885 () | 126828..127106 | + | 279 | WP_041316237.1 | hypothetical protein | - |
| MYCSM_RS34890 () | 127328..128296 | + | 969 | WP_015298257.1 | DUF4192 domain-containing protein | - |
| MYCSM_RS34895 () | 128502..129158 | + | 657 | WP_051074020.1 | hypothetical protein | - |
| MYCSM_RS34900 () | 129395..134125 | + | 4731 | WP_015298259.1 | methyltransferase domain-containing protein | - |
| MYCSM_RS34905 () | 134264..134629 | + | 366 | WP_051074015.1 | hypothetical protein | - |
| MYCSM_RS34910 () | 134673..135032 | - | 360 | WP_015298260.1 | hypothetical protein | - |
| MYCSM_RS34915 () | 135225..136054 | + | 830 | Protein_142 | hypothetical protein | - |
| MYCSM_RS34920 () | 136318..136791 | + | 474 | WP_157681645.1 | hypothetical protein | - |
| MYCSM_RS34925 () | 136791..137036 | + | 246 | WP_015298263.1 | hypothetical protein | - |
| MYCSM_RS34930 () | 137033..137758 | + | 726 | WP_157681640.1 | hypothetical protein | - |
| MYCSM_RS34935 () | 137755..138006 | + | 252 | WP_041316240.1 | hypothetical protein | - |
| MYCSM_RS37975 () | 138073..138228 | + | 156 | WP_198345151.1 | hypothetical protein | - |
| MYCSM_RS34940 () | 139087..139386 | - | 300 | WP_015298266.1 | hypothetical protein | - |
| MYCSM_RS34945 () | 139481..139696 | - | 216 | WP_015298267.1 | hypothetical protein | - |
| MYCSM_RS34950 () | 139693..140223 | - | 531 | WP_041316298.1 | hypothetical protein | - |
| MYCSM_RS34955 () | 140430..140687 | - | 258 | WP_015298269.1 | hypothetical protein | - |
| MYCSM_RS34960 () | 140811..141290 | - | 480 | WP_015298270.1 | hypothetical protein | - |
| MYCSM_RS34965 () | 141287..141538 | - | 252 | WP_015298271.1 | hypothetical protein | - |
| MYCSM_RS36650 () | 141538..142158 | - | 621 | WP_015298272.1 | hypothetical protein | - |
| MYCSM_RS34980 () | 142166..142885 | - | 720 | WP_015298273.1 | hypothetical protein | - |
| MYCSM_RS34985 () | 143091..143282 | - | 192 | WP_015298274.1 | hypothetical protein | - |
| MYCSM_RS34990 () | 143279..143668 | - | 390 | WP_051074016.1 | hypothetical protein | - |
| MYCSM_RS34995 () | 143732..144616 | - | 885 | WP_157681646.1 | hypothetical protein | - |
| MYCSM_RS35000 () | 144800..145109 | + | 310 | Protein_159 | hypothetical protein | - |
| MYCSM_RS35005 () | 145106..145330 | + | 225 | WP_015298278.1 | hypothetical protein | - |
| MYCSM_RS35010 () | 145327..145647 | + | 321 | WP_015298279.1 | hypothetical protein | - |
| MYCSM_RS37650 () | 145702..145854 | + | 153 | WP_015298280.1 | hypothetical protein | - |
| MYCSM_RS35015 () | 145851..146063 | + | 213 | WP_015298281.1 | hypothetical protein | - |
| MYCSM_RS35020 () | 146147..147106 | - | 960 | WP_015298282.1 | DUF1942 domain-containing protein | - |
| MYCSM_RS35025 () | 147265..149247 | - | 1983 | WP_015298283.1 | hypothetical protein | - |
| MYCSM_RS35030 () | 149407..149895 | + | 489 | WP_015298284.1 | transcriptional regulator | - |
| MYCSM_RS35630 () | 149913..150614 | - | 702 | WP_015298285.1 | Protein of unknown function (DUF2580) | - |
| MYCSM_RS35040 () | 150633..151043 | - | 411 | WP_015298286.1 | hypothetical protein | - |
| MYCSM_RS35045 () | 151115..152083 | - | 969 | WP_015298287.1 | DUF2637 domain-containing protein | - |
| MYCSM_RS35050 () | 152244..152483 | - | 240 | WP_015298288.1 | hypothetical protein | - |
| MYCSM_RS35055 () | 152522..152866 | - | 345 | WP_015298289.1 | hypothetical protein | - |
| MYCSM_RS35060 () | 152980..153855 | + | 876 | WP_015298290.1 | hypothetical protein | - |
| MYCSM_RS35065 () | 154000..154503 | + | 504 | WP_015298291.1 | hypothetical protein | - |
| MYCSM_RS37655 () | 154500..154673 | + | 174 | WP_015298292.1 | hypothetical protein | - |
| MYCSM_RS35070 () | 154679..155212 | + | 534 | WP_015298293.1 | hypothetical protein | - |
| MYCSM_RS35075 () | 155423..155950 | + | 528 | WP_015298294.1 | hypothetical protein | - |
| MYCSM_RS35080 () | 155947..156870 | - | 924 | WP_015298295.1 | hypothetical protein | - |
| MYCSM_RS35085 () | 157004..158401 | - | 1398 | WP_015298296.1 | replicative DNA helicase | - |
| MYCSM_RS35090 () | 158398..159732 | - | 1335 | WP_083906463.1 | hypothetical protein | - |
| MYCSM_RS37980 () | 160139..160309 | - | 171 | WP_015298298.1 | hypothetical protein | - |
| MYCSM_RS35095 () | 160302..160631 | - | 330 | WP_015298299.1 | hypothetical protein | - |
| MYCSM_RS35100 () | 160628..161329 | - | 702 | WP_015298300.1 | hypothetical protein | - |
| MYCSM_RS35105 () | 161326..163065 | - | 1740 | WP_015298301.1 | DEAD/DEAH box helicase | - |
| MYCSM_RS35110 () | 163062..163463 | - | 402 | WP_015298302.1 | hypothetical protein | - |
| MYCSM_RS35115 () | 163460..164104 | - | 645 | WP_015298303.1 | DUF1643 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|